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4H5R
Biol. Unit 3
Info
Asym.Unit (141 KB)
Biol.Unit 1 (70 KB)
Biol.Unit 2 (70 KB)
Biol.Unit 3 (135 KB)
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(1)
Title
:
HSC70 NBD WITH NA, CL AND GLYCEROL
Authors
:
B. Stec
Date
:
18 Sep 12 (Deposition) - 19 Mar 14 (Release) - 14 Jan 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.64
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: A,B (1x)
Keywords
:
Hsc70 Nbd Domain, Transcription
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Z. Zhang, J. Cellitti, P. Teriete, M. Pellecchia, B. Stec
New Crystal Structures Of Hsc-70 Atp Binding Domain Confirm The Role Of Individual Binding Pockets And Suggest A New Method Of Inhibition.
Biochimie V. 108 186 2015
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Hetero Components
(3, 14)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
3a: SODIUM ION (NAa)
3b: SODIUM ION (NAb)
4a: PHOSPHATE ION (PO4a)
4b: PHOSPHATE ION (PO4b)
4c: PHOSPHATE ION (PO4c)
4d: PHOSPHATE ION (PO4d)
4e: PHOSPHATE ION (PO4e)
4f: PHOSPHATE ION (PO4f)
4g: PHOSPHATE ION (PO4g)
5a: SULFATE ION (SO4a)
5b: SULFATE ION (SO4b)
5c: SULFATE ION (SO4c)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CL
-1
Ligand/Ion
CHLORIDE ION
2
GOL
4
Ligand/Ion
GLYCEROL
3
NA
-1
Ligand/Ion
SODIUM ION
4
PO4
7
Ligand/Ion
PHOSPHATE ION
5
SO4
3
Ligand/Ion
SULFATE ION
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Sites
(18, 18)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
PO4 A:402 , HOH A:501 , HOH A:502 , HOH A:503 , HOH A:504 , HOH A:505
BINDING SITE FOR RESIDUE NA A 401
02
AC2
SOFTWARE
GLY A:12 , THR A:13 , LYS A:71 , GLU A:175 , THR A:204 , NA A:401 , HOH A:501 , HOH A:502 , HOH A:505 , HOH A:523 , HOH A:606 , HOH A:633
BINDING SITE FOR RESIDUE PO4 A 402
03
AC3
SOFTWARE
THR A:14 , TYR A:15 , HOH A:505 , HOH A:523
BINDING SITE FOR RESIDUE CL A 403
04
AC4
SOFTWARE
ARG A:77 , ARG A:100 , ILE A:297 , THR A:298 , ARG A:301 , HOH A:689 , HOH A:695 , HOH A:702
BINDING SITE FOR RESIDUE PO4 A 404
05
AC5
SOFTWARE
GLU A:255 , ASN A:256 , TYR A:288 , HOH A:573
BINDING SITE FOR RESIDUE PO4 A 405
06
AC6
SOFTWARE
GLN A:156 , LYS A:159 , ARG A:247 , HOH A:832 , HOH A:836
BINDING SITE FOR RESIDUE PO4 A 406
07
AC7
SOFTWARE
LYS A:159 , ARG A:171 , ILE A:172 , HOH A:732 , HOH A:770
BINDING SITE FOR RESIDUE PO4 A 407
08
AC8
SOFTWARE
GLY A:224 , ASP A:225 , THR A:226
BINDING SITE FOR RESIDUE SO4 A 408
09
AC9
SOFTWARE
THR A:13 , LYS A:71 , ARG A:76 , TYR A:149 , PHE A:150 , GLN A:154 , THR A:204 , THR A:226 , HOH A:674 , HOH A:851
BINDING SITE FOR RESIDUE GOL A 409
10
BC1
SOFTWARE
ASN A:151 , ASP A:152 , LYS A:248 , HOH A:547
BINDING SITE FOR RESIDUE GOL A 410
11
BC2
SOFTWARE
PO4 B:402 , HOH B:501 , HOH B:502 , HOH B:503 , HOH B:504
BINDING SITE FOR RESIDUE NA B 401
12
BC3
SOFTWARE
GLY B:12 , THR B:13 , LYS B:71 , PRO B:147 , GLU B:175 , THR B:204 , NA B:401 , HOH B:501 , HOH B:502 , HOH B:640 , HOH B:641
BINDING SITE FOR RESIDUE PO4 B 402
13
BC4
SOFTWARE
THR B:14 , TYR B:15 , HOH B:505
BINDING SITE FOR RESIDUE CL B 403
14
BC5
SOFTWARE
ARG B:77 , ARG B:100 , ILE B:297 , THR B:298 , ARG B:301 , HOH B:603 , HOH B:669 , HOH B:670 , HOH B:881
BINDING SITE FOR RESIDUE PO4 B 404
15
BC6
SOFTWARE
GLY B:224 , ASP B:225 , THR B:226
BINDING SITE FOR RESIDUE SO4 B 405
16
BC7
SOFTWARE
GLU B:255 , ASN B:256 , TYR B:288 , HOH B:582
BINDING SITE FOR RESIDUE SO4 B 406
17
BC8
SOFTWARE
ARG B:262 , HOH B:579 , HOH B:621 , HOH B:635
BINDING SITE FOR RESIDUE GOL B 407
18
BC9
SOFTWARE
THR B:13 , LYS B:71 , ARG B:72 , ARG B:76 , TYR B:149 , PHE B:150 , GLN B:154 , HOH B:702 , HOH B:710
BINDING SITE FOR RESIDUE GOL B 408
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(, 0)
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d4h5ra1 (A:3-188)
1b: SCOP_d4h5ra2 (A:189-384)
1c: SCOP_d4h5rb1 (B:3-188)
1d: SCOP_d4h5rb2 (B:189-384)
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Protein Domains
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Organisms
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Ribonuclease H-like motif
(1424)
Superfamily
:
Actin-like ATPase domain
(426)
Family
:
Actin/HSP70
(199)
Protein domain
:
automated matches
(47)
Human (Homo sapiens) [TaxId: 9606]
(14)
1a
d4h5ra1
A:3-188
1b
d4h5ra2
A:189-384
1c
d4h5rb1
B:3-188
1d
d4h5rb2
B:189-384
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (141 KB)
Header - Asym.Unit
Biol.Unit 1 (70 KB)
Header - Biol.Unit 1
Biol.Unit 2 (70 KB)
Header - Biol.Unit 2
Biol.Unit 3 (135 KB)
Header - Biol.Unit 3
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