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4GOV
Biol. Unit 3
Info
Asym.Unit (332 KB)
Biol.Unit 1 (163 KB)
Biol.Unit 2 (167 KB)
Biol.Unit 3 (646 KB)
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(1)
Title
:
THE CRYSTAL STRUCTURE OF HUMAN FASCIN 1 S39D MUTANT
Authors
:
S. Y. Yang, F. K. Huang, J. Huang, S. Chen, J. Jakoncic, A. Leo-Macias, R. Avalos, L. Chen, J. J. Zhang, X. Y. Huang
Date
:
20 Aug 12 (Deposition) - 28 Nov 12 (Release) - 30 Jan 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: A,B (2x)
Keywords
:
Beta-Trefoil, Actin Bundling Protein, Cancer, Metastasis, Cell Migration, Actin-Binding, Phosphoprotein, Protein Binding, Actin
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Yang, F. K. Huang, J. Huang, S. Chen, J. Jakoncic, A. Leo-Macias, R. Diaz-Avalos, L. Chen, J. J. Zhang, X. Y. Huang
Molecular Mechanism Of Fascin Function In Filopodial Formation.
J. Biol. Chem. V. 288 274 2013
[
close entry info
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Hetero Components
(1, 14)
Info
All Hetero Components
1a: BROMIDE ION (BRa)
1b: BROMIDE ION (BRb)
1c: BROMIDE ION (BRc)
1d: BROMIDE ION (BRd)
1e: BROMIDE ION (BRe)
1f: BROMIDE ION (BRf)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
2c: CHLORIDE ION (CLc)
2d: CHLORIDE ION (CLd)
2e: CHLORIDE ION (CLe)
2f: CHLORIDE ION (CLf)
2g: CHLORIDE ION (CLg)
2h: CHLORIDE ION (CLh)
2i: CHLORIDE ION (CLi)
2j: CHLORIDE ION (CLj)
2k: CHLORIDE ION (CLk)
2l: CHLORIDE ION (CLl)
2m: CHLORIDE ION (CLm)
3a: 2,3-DIHYDROXY-1,4-DITHIOBUTANE (DTTa)
4a: GLYCEROL (GOLa)
4b: GLYCEROL (GOLb)
4c: GLYCEROL (GOLc)
4d: GLYCEROL (GOLd)
4e: GLYCEROL (GOLe)
4f: GLYCEROL (GOLf)
4g: GLYCEROL (GOLg)
4h: GLYCEROL (GOLh)
4i: GLYCEROL (GOLi)
4j: GLYCEROL (GOLj)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BR
-1
Ligand/Ion
BROMIDE ION
2
CL
-1
Ligand/Ion
CHLORIDE ION
3
DTT
-1
Ligand/Ion
2,3-DIHYDROXY-1,4-DITHIOBUTANE
4
GOL
14
Ligand/Ion
GLYCEROL
[
close Hetero Component info
]
Sites
(30, 30)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ALA A:370
BINDING SITE FOR RESIDUE BR A 501
02
AC2
SOFTWARE
ARG A:82 , GLY A:86 , ASP A:88
BINDING SITE FOR RESIDUE BR A 502
03
AC3
SOFTWARE
ARG A:118
BINDING SITE FOR RESIDUE CL A 503
04
AC4
SOFTWARE
ARG A:82 , GLU A:83
BINDING SITE FOR RESIDUE CL A 504
05
AC5
SOFTWARE
LYS B:32
BINDING SITE FOR RESIDUE CL A 505
06
AC6
SOFTWARE
ARG A:167 , ASP A:168 , VAL A:169
BINDING SITE FOR RESIDUE CL A 506
07
AC7
SOFTWARE
PRO A:52 , ARG A:90 , HOH A:628 , HOH A:633
BINDING SITE FOR RESIDUE CL A 507
08
AC8
SOFTWARE
TRP A:340 , ASP A:342 , ILE A:345 , GLY A:421 , TYR A:423 , PHE A:452 , PHE A:453 , HOH A:641 , HOH A:677
BINDING SITE FOR RESIDUE GOL A 508
09
AC9
SOFTWARE
LYS A:379 , LEU A:380 , ILE A:381 , ASN A:382 , ARG A:383 , PRO A:384 , LEU A:416 , PHE A:418
BINDING SITE FOR RESIDUE GOL A 509
10
BC1
SOFTWARE
TYR A:145 , VAL A:147 , LYS A:150 , LYS A:220
BINDING SITE FOR RESIDUE GOL A 510
11
BC2
SOFTWARE
SER A:57 , ALA A:58 , ARG A:217 , SER A:218 , GLY A:219 , LYS A:220 , LEU A:253 , HOH A:742 , HOH A:775
BINDING SITE FOR RESIDUE DTT A 511
12
BC3
SOFTWARE
ARG B:82 , GLY B:86 , ASP B:88
BINDING SITE FOR RESIDUE BR B 501
13
BC4
SOFTWARE
ARG B:90
BINDING SITE FOR RESIDUE BR B 502
14
BC5
SOFTWARE
GLU B:83
BINDING SITE FOR RESIDUE BR B 503
15
BC6
SOFTWARE
ARG B:217 , SER B:218
BINDING SITE FOR RESIDUE BR B 504
16
BC7
SOFTWARE
THR A:320 , ASP B:420
BINDING SITE FOR RESIDUE CL B 505
17
BC8
SOFTWARE
PRO B:128 , LYS B:131
BINDING SITE FOR RESIDUE CL B 506
18
BC9
SOFTWARE
ARG B:167 , ASP B:168
BINDING SITE FOR RESIDUE CL B 507
19
CC1
SOFTWARE
GLN A:324 , PHE B:418
BINDING SITE FOR RESIDUE CL B 508
20
CC2
SOFTWARE
GLN B:182 , ARG B:185 , HOH B:648
BINDING SITE FOR RESIDUE CL B 509
21
CC3
SOFTWARE
TYR B:230 , GLY B:243 , LYS B:244
BINDING SITE FOR RESIDUE CL B 510
22
CC4
SOFTWARE
THR A:434 , VAL A:435 , VAL A:449 , ARG B:110 , GLN B:124
BINDING SITE FOR RESIDUE CL B 511
23
CC5
SOFTWARE
THR B:115 , GLU B:116
BINDING SITE FOR RESIDUE CL B 512
24
CC6
SOFTWARE
TRP B:340 , ASP B:342 , ILE B:345 , GLY B:421 , TYR B:423 , PHE B:452 , PHE B:453 , HOH B:863
BINDING SITE FOR RESIDUE GOL B 513
25
CC7
SOFTWARE
LEU B:380 , ILE B:381 , ASN B:382 , ARG B:383 , PRO B:384 , LEU B:416 , PHE B:418 , HOH B:621
BINDING SITE FOR RESIDUE GOL B 514
26
CC8
SOFTWARE
THR A:326 , ALA A:327 , SER A:329 , HOH A:638 , GLN B:415 , LYS B:426 , SER B:428 , GLY B:430
BINDING SITE FOR RESIDUE GOL B 515
27
CC9
SOFTWARE
LYS A:43 , HIS A:65 , HOH A:869 , ASN B:21
BINDING SITE FOR RESIDUE GOL B 516
28
DC1
SOFTWARE
GLU B:8 , ALA B:9 , GLN B:11 , GLN B:258 , GLU B:492 , HOH B:789
BINDING SITE FOR RESIDUE GOL B 517
29
DC2
SOFTWARE
PRO A:487 , ARG B:398 , LYS B:399 , VAL B:400 , ARG B:408
BINDING SITE FOR RESIDUE GOL B 518
30
DC3
SOFTWARE
ARG B:344 , ASP B:420
BINDING SITE FOR RESIDUE GOL B 519
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
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PROSITE Patterns/Profiles
(, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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Label:
End label:
Sorry, no Info available
[
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 8)
Info
All SCOP Domains
1a: SCOP_d4gova1 (A:6-140)
1b: SCOP_d4gova3 (A:260-382)
1c: SCOP_d4gova4 (A:383-493)
1d: SCOP_d4govb1 (B:7-140)
1e: SCOP_d4govb2 (B:141-259)
1f: SCOP_d4govb3 (B:260-382)
1g: SCOP_d4govb4 (B:383-493)
1h: SCOP_d4gova2 (A:141-259)
View:
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Label:
Classes
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)
(
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Folds
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)
Superfamilies
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)
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)
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
beta-Trefoil
(385)
Superfamily
:
Actin-crosslinking proteins
(8)
Family
:
Fascin
(6)
Protein domain
:
Fascin
(6)
Human (Homo sapiens) [TaxId: 9606]
(6)
1a
d4gova1
A:6-140
1b
d4gova3
A:260-382
1c
d4gova4
A:383-493
1d
d4govb1
B:7-140
1e
d4govb2
B:141-259
1f
d4govb3
B:260-382
1g
d4govb4
B:383-493
1h
d4gova2
A:141-259
[
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]
CATH Domains
(0, 0)
Info
all CATH domains
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Label:
Sorry, no Info available
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
[
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Atom Selection
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Asymmetric Unit 1
Asymmetric Unit 2
Asymmetric Unit 3
Asymmetric Unit 4
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select chains 'A' and 'C'
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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set fontsize 20
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show SS bonds with a radius of 100 units (=0.4Å)
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