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4GOH
Asym. Unit
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Asym.Unit (43 KB)
Biol.Unit 1 (39 KB)
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(1)
Title
:
STRUCTURE OF THE SUBSTRATE-FREE HMUO, HO FROM CORYNEBACTERIUM DIPHTHERIAE
Authors
:
M. Unno, M. Ikeda-Saito
Date
:
20 Aug 12 (Deposition) - 21 Aug 13 (Release) - 21 Aug 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Helix, Heme Degradation, Heme, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Unno, A. Ardevol, C. Rovira, M. Ikeda-Saito
Crystal Structure Of The Substrate-Free And The Product-Bound Forms Of Hmuo, A Heme Oxygenase From Corynebacterium Diphtheriae
To Be Published
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Hetero Components
(2, 8)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
1e: GLYCEROL (GOLe)
1f: GLYCEROL (GOLf)
2a: SODIUM ION (NAa)
2b: SODIUM ION (NAb)
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No.
Name
Count
Type
Full Name
1
GOL
6
Ligand/Ion
GLYCEROL
2
NA
2
Ligand/Ion
SODIUM ION
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLN A:46 , TYR A:53 , ARG A:132 , PHE A:160 , PHE A:208 , HOH A:1101 , HOH A:1148 , HOH A:1196
BINDING SITE FOR RESIDUE GOL A 1001
2
AC2
SOFTWARE
ARG A:112 , GLU A:115 , ILE A:116 , ASN A:119 , ASP A:121 , GLU A:196 , GOL A:1006
BINDING SITE FOR RESIDUE GOL A 1002
3
AC3
SOFTWARE
ASN A:119 , LEU A:211 , GLY A:214 , LEU A:215 , HOH A:1204
BINDING SITE FOR RESIDUE GOL A 1003
4
AC4
SOFTWARE
MET A:29 , HIS A:205 , HOH A:1107 , HOH A:1148
BINDING SITE FOR RESIDUE GOL A 1004
5
AC5
SOFTWARE
GLY A:67 , PHE A:68 , ALA A:69 , LEU A:183 , GLU A:184
BINDING SITE FOR RESIDUE GOL A 1005
6
AC6
SOFTWARE
THR A:101 , ASN A:119 , ASP A:121 , GLY A:214 , LEU A:215 , GOL A:1002 , HOH A:1117 , HOH A:1165
BINDING SITE FOR RESIDUE GOL A 1006
7
AC7
SOFTWARE
HOH A:1205
BINDING SITE FOR RESIDUE NA A 1007
8
AC8
SOFTWARE
HIS A:20 , HOH A:1269
BINDING SITE FOR RESIDUE NA A 1008
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d4goha_ (A:)
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Protein Domains
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Organisms
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(
)
Class
:
All alpha proteins
(14657)
Fold
:
Heme oxygenase-like
(107)
Superfamily
:
Heme oxygenase-like
(107)
Family
:
Eukaryotic type heme oxygenase
(69)
Protein domain
:
Heme oxygenase HmuO
(16)
Corynebacterium diphtheriae [TaxId: 1717]
(16)
1a
d4goha_
A:
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CATH Domains
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all CATH domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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