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4CW7
Asym. Unit
Info
Asym.Unit (414 KB)
Biol.Unit 1 (104 KB)
Biol.Unit 2 (103 KB)
Biol.Unit 3 (103 KB)
Biol.Unit 4 (102 KB)
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(1)
Title
:
STRUCTURE OF THE FAP7-RPS14 COMPLEX IN COMPLEX WITH ATP
Authors
:
J. Loch, M. Blaud, S. Rety, S. Lebaron, P. Deschamps, J. Bareille, J. Jom J. Robert-Paganin, L. Delbos, F. Chardon, E. Zhang, C. Charenton, D. T N. Leulliot
Date
:
01 Apr 14 (Deposition) - 28 May 14 (Release) - 28 May 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.46
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: G,H (1x)
Biol. Unit 2: A,B (1x)
Biol. Unit 3: E,F (1x)
Biol. Unit 4: C,D (1x)
Keywords
:
Transferase, Ribosome Biogenesis, Rnp Assembly
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Loch, M. Blaud, S. Rety, S. Lebaron, P. Deschamps, J. Bareille, J. Jombart, J. Robert-Paganin, L. Delbos, F. Chardon, E. Zhang, C. Charenton, D. Tollervey, N. Leulliot
Rna Mimicry By The Fap7 Adenylate Kinase In Ribosome Biogenesis
Plos Biol. V. 12 01860 2014
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Hetero Components
(3, 12)
Info
All Hetero Components
1a: ADENOSINE-5'-DIPHOSPHATE (ADPa)
1b: ADENOSINE-5'-DIPHOSPHATE (ADPb)
2a: ADENOSINE-5'-TRIPHOSPHATE (ATPa)
2b: ADENOSINE-5'-TRIPHOSPHATE (ATPb)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
3c: MAGNESIUM ION (MGc)
3d: MAGNESIUM ION (MGd)
3e: MAGNESIUM ION (MGe)
3f: MAGNESIUM ION (MGf)
3g: MAGNESIUM ION (MGg)
3h: MAGNESIUM ION (MGh)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ADP
2
Ligand/Ion
ADENOSINE-5'-DIPHOSPHATE
2
ATP
2
Ligand/Ion
ADENOSINE-5'-TRIPHOSPHATE
3
MG
8
Ligand/Ion
MAGNESIUM ION
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
PRO A:9 , GLY A:10 , VAL A:11 , GLY A:12 , LYS A:13 , THR A:14 , THR A:15 , ARG A:96 , ARG A:100 , LYS A:138 , PRO A:140 , ILE A:143 , MG A:1002 , HOH A:2003 , HOH A:2004 , HOH A:2005 , HOH A:2018 , HOH A:2031 , GLU E:99
BINDING SITE FOR RESIDUE ATP A1001
02
AC2
SOFTWARE
THR A:14 , ATP A:1001 , HOH A:2003 , HOH A:2004 , HOH A:2005
BINDING SITE FOR RESIDUE MG A1002
03
AC3
SOFTWARE
ASP A:163 , GLU A:166 , HOH A:2026 , HOH A:2029 , HOH A:2030 , ASP B:51 , GLU B:54
BINDING SITE FOR RESIDUE MG A1003
04
AC4
SOFTWARE
GLY C:10 , VAL C:11 , GLY C:12 , LYS C:13 , THR C:14 , THR C:15 , ARG C:96 , ARG C:100 , LYS C:138 , PRO C:140 , ILE C:143 , MG C:1002 , HOH C:2002 , HOH C:2003
BINDING SITE FOR RESIDUE ADP C1001
05
AC5
SOFTWARE
THR C:14 , ADP C:1001 , HOH C:2002 , HOH C:2003
BINDING SITE FOR RESIDUE MG C1002
06
AC6
SOFTWARE
ASP C:163 , GLU C:166 , ASP D:51 , GLU D:54
BINDING SITE FOR RESIDUE MG C1003
07
AC7
SOFTWARE
HOH A:2015 , PRO E:9 , GLY E:10 , VAL E:11 , GLY E:12 , LYS E:13 , THR E:14 , THR E:15 , ARG E:96 , ARG E:100 , LYS E:138 , PRO E:140 , ILE E:143 , MG E:1002 , HOH E:2002 , HOH E:2003 , HOH E:2004 , HOH E:2005 , HOH E:2006
BINDING SITE FOR RESIDUE ATP E1001
08
AC8
SOFTWARE
THR E:14 , ATP E:1001 , HOH E:2004 , HOH E:2005 , HOH E:2006
BINDING SITE FOR RESIDUE MG E1002
09
AC9
SOFTWARE
ASP E:163 , GLU E:166 , HOH E:2031 , HOH E:2032 , HOH E:2035 , ASP F:51 , GLU F:54
BINDING SITE FOR RESIDUE MG E1003
10
BC1
SOFTWARE
GLY G:10 , VAL G:11 , GLY G:12 , LYS G:13 , THR G:14 , THR G:15 , ARG G:96 , ARG G:100 , LYS G:138 , PRO G:140 , ILE G:143 , MG G:1002 , HOH G:2004 , HOH G:2011
BINDING SITE FOR RESIDUE ADP G1001
11
BC2
SOFTWARE
THR G:14 , ADP G:1001 , HOH G:2003 , HOH G:2004 , HOH G:2011
BINDING SITE FOR RESIDUE MG G1002
12
BC3
SOFTWARE
ASP G:163 , GLU G:166 , HOH G:2018 , HOH G:2020 , ASP H:51 , GLU H:54
BINDING SITE FOR RESIDUE MG G1003
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: RIBOSOMAL_S11 (B:102-124,D:102-124,F:102-124,H:10...)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RIBOSOMAL_S11
PS00054
Ribosomal protein S11 signature.
RS11_PYRAB
102-124
4
B:102-124
D:102-124
F:102-124
H:102-124
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Exons
(0, 0)
Info
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (414 KB)
Header - Asym.Unit
Biol.Unit 1 (104 KB)
Header - Biol.Unit 1
Biol.Unit 2 (103 KB)
Header - Biol.Unit 2
Biol.Unit 3 (103 KB)
Header - Biol.Unit 3
Biol.Unit 4 (102 KB)
Header - Biol.Unit 4
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