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4C00
Asym. Unit
Info
Asym.Unit (309 KB)
Biol.Unit 1 (298 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF TAMA FROM E. COLI
Authors
:
F. Gruss, F. Zaehringer, R. P. Jakob, B. M. Burmann, S. Hiller, T. Maier
Date
:
30 Jul 13 (Deposition) - 25 Sep 13 (Release) - 20 Nov 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.25
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Transport Protein, Ytfm, Polypeptide Transport-Associated, Autotransporter Biogenesis, Autotransporter Assembly, Outer Membrane Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
F. Gruss, F. Zaehringer, R. P. Jakob, B. M. Burmann, S. Hiller, T. Maier
The Structural Basis Of Autotransporter Translocation By Tama
Nat. Struct. Mol. Biol. V. 20 1318 2013
[
close entry info
]
Hetero Components
(3, 21)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
2c: CHLORIDE ION (CLc)
3a: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOS... (MC3a)
3b: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOS... (MC3b)
3c: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOS... (MC3c)
3d: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOS... (MC3d)
3e: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOS... (MC3e)
3f: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOS... (MC3f)
3g: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOS... (MC3g)
3h: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOS... (MC3h)
3i: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOS... (MC3i)
3j: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOS... (MC3j)
3k: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOS... (MC3k)
3l: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOS... (MC3l)
3m: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOS... (MC3m)
3n: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOS... (MC3n)
3o: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOS... (MC3o)
3p: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOS... (MC3p)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
2
Ligand/Ion
ACETATE ION
2
CL
3
Ligand/Ion
CHLORIDE ION
3
MC3
16
Ligand/Ion
1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE
[
close Hetero Component info
]
Sites
(21, 21)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
VAL A:282 , ALA A:284 , ILE A:304 , SER A:305 , ALA A:306 , GLN A:309 , LEU A:311 , ARG A:442 , HIS A:443 , TYR A:506 , TYR A:508 , MC3 A:608 , MC3 A:611 , HOH A:2221
BINDING SITE FOR RESIDUE MC3 A 601
02
AC2
SOFTWARE
ASN A:292 , SER A:293 , TYR A:294 , TYR A:315 , GLN A:331 , GLY A:332 , MC3 A:611 , MC3 A:613
BINDING SITE FOR RESIDUE MC3 A 602
03
AC3
SOFTWARE
ASN A:433 , THR A:447 , ARG A:448 , GLY A:449 , ILE A:500 , SER A:503 , SER A:522 , PHE A:534 , THR A:536 , MC3 A:616
BINDING SITE FOR RESIDUE MC3 A 603
04
AC4
SOFTWARE
PHE A:334 , ARG A:336
BINDING SITE FOR RESIDUE MC3 A 604
05
AC5
SOFTWARE
TRP A:514 , TRP A:544
BINDING SITE FOR RESIDUE MC3 A 605
06
AC6
SOFTWARE
THR A:270 , VAL A:272 , LEU A:573 , MC3 A:608
BINDING SITE FOR RESIDUE MC3 A 606
07
AC7
SOFTWARE
SER A:359 , TRP A:361 , ARG A:363
BINDING SITE FOR RESIDUE MC3 A 607
08
AC8
SOFTWARE
TYR A:440 , HIS A:443 , TYR A:506 , MC3 A:601 , MC3 A:606
BINDING SITE FOR RESIDUE MC3 A 608
09
AC9
SOFTWARE
MC3 A:612 , MC3 A:615
BINDING SITE FOR RESIDUE MC3 A 609
10
BC1
SOFTWARE
MET A:384 , TRP A:420 , GLY A:421 , MC3 A:614
BINDING SITE FOR RESIDUE MC3 A 610
11
BC2
SOFTWARE
GLU A:265 , TRP A:286 , LYS A:288 , TRP A:290 , MET A:291 , LEU A:298 , GLY A:516 , LEU A:567 , MC3 A:601 , MC3 A:602 , HOH A:2070 , HOH A:2220
BINDING SITE FOR RESIDUE MC3 A 611
12
BC3
SOFTWARE
GLU A:325 , TRP A:355 , LEU A:357 , ARG A:363 , VAL A:390 , MC3 A:609
BINDING SITE FOR RESIDUE MC3 A 612
13
BC4
SOFTWARE
TYR A:294 , HIS A:296 , TRP A:453 , LYS A:498 , SER A:527 , ASP A:528 , ILE A:529 , ARG A:530 , MC3 A:602
BINDING SITE FOR RESIDUE MC3 A 613
14
BC5
SOFTWARE
ARG A:396 , TRP A:405 , ARG A:437 , MC3 A:610
BINDING SITE FOR RESIDUE MC3 A 614
15
BC6
SOFTWARE
TYR A:328 , ARG A:353 , ILE A:529 , ARG A:530 , SER A:532 , MC3 A:609 , CL A:802
BINDING SITE FOR RESIDUE MC3 A 615
16
BC7
SOFTWARE
ARG A:394 , GLN A:409 , MC3 A:603
BINDING SITE FOR RESIDUE MC3 A 616
17
BC8
SOFTWARE
ARG A:228 , LEU A:324 , LEU A:357 , SER A:358 , HOH A:2101
BINDING SITE FOR RESIDUE ACT A 701
18
BC9
SOFTWARE
SER A:297 , THR A:299 , SER A:314
BINDING SITE FOR RESIDUE ACT A 702
19
CC1
SOFTWARE
ASP A:460 , ARG A:467 , TYR A:488
BINDING SITE FOR RESIDUE CL A 801
20
CC2
SOFTWARE
LEU A:319 , LEU A:320 , ARG A:530 , MC3 A:615 , HOH A:2040
BINDING SITE FOR RESIDUE CL A 802
21
CC3
SOFTWARE
ARG A:368 , HOH A:2128
BINDING SITE FOR RESIDUE CL A 803
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: POTRA (A:187-263)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
POTRA
PS51779
POTRA domain profile.
TAMA_ECOLI
187-263
1
A:187-263
[
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]
Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
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Sorry, no Info available
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CATH Domains
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Info
all CATH domains
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Sorry, no Info available
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Label:
Sorry, no Info available
[
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Protein
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Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Asymmetric Unit 1
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select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
ssbonds 100
show SS bonds with a radius of 100 units (=0.4Å)
wireframe 100
show bonds with a radius of 100 units (=0.4Å)
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Asym.Unit (309 KB)
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