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4AVB
Biol. Unit 2
Info
Asym.Unit (224 KB)
Biol.Unit 1 (111 KB)
Biol.Unit 2 (110 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF PROTEIN LYSINE ACETYLTRANSFERASE RV0998 IN COMPLEX WITH ACETYL COA AND CAMP
Authors
:
H. J. Lee, P. T. Lang, S. M. Fortune, C. M. Sassetti, T. Alber
Date
:
24 May 12 (Deposition) - 11 Jul 12 (Release) - 22 Aug 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Transferase, Allosteric Regulation, Domain Coupling
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. J. Lee, P. T. Lang, S. M. Fortune, C. M. Sassetti, T. Alber
Cyclic Amp Regulation Of Protein Lysine Acetylation In Mycobacterium Tuberculosis.
Nat. Struct. Mol. Biol. V. 19 811 2012
[
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Hetero Components
(5, 11)
Info
All Hetero Components
1a: ACETYL COENZYME *A (ACOa)
1b: ACETYL COENZYME *A (ACOb)
2a: ACETATE ION (ACTa)
3a: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHA... (CMPa)
3b: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHA... (CMPb)
4a: 1,2-ETHANEDIOL (EDOa)
4b: 1,2-ETHANEDIOL (EDOb)
4c: 1,2-ETHANEDIOL (EDOc)
4d: 1,2-ETHANEDIOL (EDOd)
4e: 1,2-ETHANEDIOL (EDOe)
4f: 1,2-ETHANEDIOL (EDOf)
4g: 1,2-ETHANEDIOL (EDOg)
4h: 1,2-ETHANEDIOL (EDOh)
5a: DI(HYDROXYETHYL)ETHER (PEGa)
5b: DI(HYDROXYETHYL)ETHER (PEGb)
5c: DI(HYDROXYETHYL)ETHER (PEGc)
5d: DI(HYDROXYETHYL)ETHER (PEGd)
5e: DI(HYDROXYETHYL)ETHER (PEGe)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ACO
1
Ligand/Ion
ACETYL COENZYME *A
2
ACT
1
Ligand/Ion
ACETATE ION
3
CMP
1
Ligand/Ion
ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
4
EDO
4
Ligand/Ion
1,2-ETHANEDIOL
5
PEG
4
Ligand/Ion
DI(HYDROXYETHYL)ETHER
[
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Sites
(15, 15)
Info
All Sites
01: AC3 (SOFTWARE)
02: AC4 (SOFTWARE)
03: AC6 (SOFTWARE)
04: AC7 (SOFTWARE)
05: AC8 (SOFTWARE)
06: AC9 (SOFTWARE)
07: BC1 (SOFTWARE)
08: BC2 (SOFTWARE)
09: BC3 (SOFTWARE)
10: BC4 (SOFTWARE)
11: BC5 (SOFTWARE)
12: BC6 (SOFTWARE)
13: BC7 (SOFTWARE)
14: BC8 (SOFTWARE)
15: BC9 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC3
SOFTWARE
LEU A:274 , SER A:275 , ASP A:276 , GLY A:297 , HOH A:2180 , HOH A:2242 , ARG B:80
BINDING SITE FOR RESIDUE EDO A1334
02
AC4
SOFTWARE
GLU A:52 , PRO A:53 , VAL A:55 , VAL B:12 , ARG B:315
BINDING SITE FOR RESIDUE EDO A1335
03
AC6
SOFTWARE
PRO A:145 , MET A:157 , ARG A:159 , THR A:213 , GLY A:215 , PEG B:1337
BINDING SITE FOR RESIDUE PEG A1337
04
AC7
SOFTWARE
THR A:180 , ARG A:183 , ILE A:236 , ALA A:237 , PHE A:238 , THR A:239 , VAL A:240 , GLN A:245 , GLY A:246 , ARG A:247 , GLY A:248 , ILE A:249 , GLY A:250 , SER A:251 , ARG A:272 , MET A:273 , ASN A:277 , VAL A:278 , PRO A:279 , THR A:282 , ILE A:283 , ARG A:286 , HOH A:2224 , HOH A:2226 , HOH A:2227 , HOH A:2273 , ARG B:286 , ACO B:1342
BINDING SITE FOR RESIDUE ACO A1338
05
AC8
SOFTWARE
VAL B:67 , ALA B:79 , ARG B:80 , VAL B:87 , GLY B:88 , GLU B:89 , ILE B:90 , ALA B:91 , ARG B:98 , SER B:99 , ALA B:100 , VAL B:102 , ARG B:138 , PHE B:142 , EDO B:1336 , HOH B:2067 , HOH B:2072
BINDING SITE FOR RESIDUE CMP B 400
06
AC9
SOFTWARE
HIS B:173 , ILE B:174 , GLN B:175 , ALA B:241 , ASP B:242 , ALA B:243 , HOH B:2214
BINDING SITE FOR RESIDUE EDO B1333
07
BC1
SOFTWARE
ARG B:94 , GLN B:327 , HOH B:2103
BINDING SITE FOR RESIDUE EDO B1334
08
BC2
SOFTWARE
GLY B:126 , GLU B:129 , ARG B:130 , ARG B:133
BINDING SITE FOR RESIDUE EDO B1335
09
BC3
SOFTWARE
GLN B:137 , ARG B:138 , PRO B:163 , CMP B:400 , HOH B:2097 , HOH B:2100 , HOH B:2102
BINDING SITE FOR RESIDUE EDO B1336
10
BC4
SOFTWARE
GLY A:215 , PEG A:1337 , HOH A:2211 , VAL B:190 , SER B:192 , PRO B:193
BINDING SITE FOR RESIDUE PEG B1337
11
BC5
SOFTWARE
ARG B:133 , GLN B:137 , GLU B:201 , HOH B:2094 , HOH B:2096 , HOH B:2101 , HOH B:2161 , HOH B:2217
BINDING SITE FOR RESIDUE PEG B1338
12
BC6
SOFTWARE
TYR B:287 , MET B:302 , ILE B:303 , ASP B:304 , PRO B:306
BINDING SITE FOR RESIDUE PEG B1339
13
BC7
SOFTWARE
ARG B:184 , GLU B:235 , ILE B:236 , ALA B:270 , ALA B:271 , ARG B:272 , ACT B:1341 , ACO B:1342 , HOH B:2142
BINDING SITE FOR RESIDUE PEG B1340
14
BC8
SOFTWARE
ARG B:223 , GLU B:235 , PEG B:1340 , HOH B:2146 , HOH B:2159
BINDING SITE FOR RESIDUE ACT B1341
15
BC9
SOFTWARE
THR A:282 , ARG A:286 , ACO A:1338 , THR B:180 , ARG B:183 , ILE B:236 , ALA B:237 , PHE B:238 , THR B:239 , VAL B:240 , GLN B:245 , GLY B:246 , ARG B:247 , GLY B:248 , ILE B:249 , GLY B:250 , SER B:251 , ARG B:272 , ASN B:277 , VAL B:278 , PRO B:279 , THR B:282 , ARG B:286 , PEG B:1340 , HOH B:2177 , HOH B:2179 , HOH B:2180 , HOH B:2194
BINDING SITE FOR RESIDUE ACO B1342
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(3, 3)
Info
All PROSITE Patterns/Profiles
1: CNMP_BINDING_3 (B:20-122)
2: CNMP_BINDING_2 (B:87-104)
3: GNAT (B:156-318)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CNMP_BINDING_3
PS50042
cAMP/cGMP binding motif profile.
PAT_MYCTU
20-122
1
-
B:20-122
2
CNMP_BINDING_2
PS00889
Cyclic nucleotide-binding domain signature 2.
PAT_MYCTU
87-104
1
-
B:87-104
3
GNAT
PS51186
Gcn5-related N-acetyltransferase (GNAT) domain profile.
PAT_MYCTU
156-318
1
-
B:156-318
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
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CATH Domains
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Pfam Domains
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Chain B
Asymmetric Unit 1
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select chains 'A' and 'C'
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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Show PDB file:
Asym.Unit (224 KB)
Header - Asym.Unit
Biol.Unit 1 (111 KB)
Header - Biol.Unit 1
Biol.Unit 2 (110 KB)
Header - Biol.Unit 2
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