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4A2U
Asym. Unit
Info
Asym.Unit (292 KB)
Biol.Unit 1 (76 KB)
Biol.Unit 2 (73 KB)
Biol.Unit 3 (75 KB)
Biol.Unit 4 (76 KB)
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(1)
Title
:
CRP(CAP) FROM MYCO. TUBERCULOSIS, WITH CAMP
Authors
:
D. T. Gallagher, P. T. Reddy
Date
:
28 Sep 11 (Deposition) - 10 Oct 12 (Release) - 10 Oct 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.63
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: E,F (1x)
Biol. Unit 4: G,H (1x)
Keywords
:
Transcription, Cyclic Amp Receptor, Transcription Regulation, Catabolite Gene Activator Protein, Allostery, Dna-Binding
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. -K. Kim, H. Robinson, P. T. Reddy, D. T. Gallagher
A New Crystal Form Of Crp From M. Tuberculosis And Conformational Effects Of Crystal Packing
To Be Published
[
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Hetero Components
(1, 8)
Info
All Hetero Components
1a: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHA... (CMPa)
1b: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHA... (CMPb)
1c: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHA... (CMPc)
1d: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHA... (CMPd)
1e: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHA... (CMPe)
1f: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHA... (CMPf)
1g: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHA... (CMPg)
1h: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHA... (CMPh)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CMP
8
Ligand/Ion
ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
[
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
PHE A:38 , ILE A:57 , LEU A:69 , MET A:72 , PHE A:78 , GLY A:79 , GLU A:80 , LEU A:81 , SER A:82 , ARG A:89 , THR A:90 , SER A:91 , ARG A:130 , THR A:134 , LEU B:131 , ASN B:135
BINDING SITE FOR RESIDUE CMP A 280
2
AC2
SOFTWARE
LEU A:131 , ASN A:135 , PHE B:38 , ILE B:57 , LEU B:69 , PHE B:78 , GLY B:79 , GLU B:80 , LEU B:81 , SER B:82 , ARG B:89 , THR B:90 , SER B:91 , ARG B:130 , THR B:134
BINDING SITE FOR RESIDUE CMP B 280
3
AC3
SOFTWARE
PHE C:38 , ILE C:57 , THR C:70 , PHE C:78 , GLY C:79 , GLU C:80 , LEU C:81 , SER C:82 , ARG C:89 , THR C:90 , SER C:91 , ARG C:130 , THR C:134 , LEU D:131 , ASN D:135
BINDING SITE FOR RESIDUE CMP C 280
4
AC4
SOFTWARE
LEU C:131 , ASN C:135 , PHE D:38 , ILE D:57 , PHE D:78 , GLY D:79 , GLU D:80 , LEU D:81 , SER D:82 , ARG D:89 , THR D:90 , SER D:91 , ARG D:130 , THR D:134
BINDING SITE FOR RESIDUE CMP D 280
5
AC5
SOFTWARE
PHE E:38 , ILE E:57 , LEU E:69 , PHE E:78 , GLY E:79 , GLU E:80 , LEU E:81 , SER E:82 , ARG E:89 , THR E:90 , SER E:91 , THR E:134 , ASN F:135
BINDING SITE FOR RESIDUE CMP E 280
6
AC6
SOFTWARE
LEU E:131 , ASN E:135 , PHE F:38 , ILE F:57 , LEU F:69 , THR F:70 , MET F:72 , PHE F:78 , GLY F:79 , GLU F:80 , LEU F:81 , SER F:82 , ARG F:89 , THR F:90 , SER F:91 , THR F:134
BINDING SITE FOR RESIDUE CMP F 280
7
AC7
SOFTWARE
PHE G:38 , ILE G:57 , LEU G:69 , PHE G:78 , GLY G:79 , GLU G:80 , LEU G:81 , SER G:82 , ARG G:89 , THR G:90 , SER G:91 , ARG G:130 , THR G:134 , ASN H:135
BINDING SITE FOR RESIDUE CMP G 280
8
AC8
SOFTWARE
LEU G:131 , ASN G:135 , PHE H:38 , ILE H:57 , THR H:70 , PHE H:78 , GLY H:79 , GLU H:80 , LEU H:81 , SER H:82 , ARG H:89 , THR H:90 , SER H:91 , ARG H:130 , THR H:134
BINDING SITE FOR RESIDUE CMP H 280
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 15)
Info
All PROSITE Patterns/Profiles
1: CNMP_BINDING_3 (A:10-130,B:10-130,C:10-130,E:10-13...)
2: HTH_CRP_2 (A:144-217,B:144-217,C:144-217,D:14...)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CNMP_BINDING_3
PS50042
cAMP/cGMP binding motif profile.
CRPL_MYCTO
10-130
7
A:10-130
B:10-130
C:10-130
E:10-130
F:10-130
G:10-130
H:10-130
CRPL_MYCTU
10-130
7
A:10-130
B:10-130
C:10-130
E:10-130
F:10-130
G:10-130
H:10-130
2
HTH_CRP_2
PS51063
Crp-type HTH domain profile.
CRPL_MYCTO
144-217
8
A:144-217
B:144-217
C:144-217
D:144-217
E:144-217
F:144-217
G:144-217
H:144-217
CRPL_MYCTU
144-217
8
A:144-217
B:144-217
C:144-217
D:144-217
E:144-217
F:144-217
G:144-217
H:144-217
[
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 16)
Info
All SCOP Domains
1a: SCOP_d4a2ua2 (A:145-224)
1b: SCOP_d4a2ud2 (D:145-224)
1c: SCOP_d4a2ue2 (E:145-224)
1d: SCOP_d4a2uf2 (F:145-224)
1e: SCOP_d4a2ug2 (G:145-224)
1f: SCOP_d4a2uh2 (H:145-224)
1g: SCOP_d4a2ub2 (B:145-224)
1h: SCOP_d4a2uc2 (C:145-224)
2a: SCOP_d4a2ua1 (A:1-144)
2b: SCOP_d4a2uc1 (C:1-144)
2c: SCOP_d4a2ud1 (D:17-144)
2d: SCOP_d4a2ue1 (E:1-144)
2e: SCOP_d4a2uf1 (F:1-144)
2f: SCOP_d4a2ug1 (G:1-144)
2g: SCOP_d4a2uh1 (H:-2-144)
2h: SCOP_d4a2ub1 (B:1-144)
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Protein Domains
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Organisms
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(
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Class
:
All alpha proteins
(14657)
Fold
:
DNA/RNA-binding 3-helical bundle
(1299)
Superfamily
:
Winged helix DNA-binding domain
(576)
Family
:
automated matches
(118)
Protein domain
:
automated matches
(118)
Mycobacterium tuberculosis [TaxId: 1773]
(6)
1a
d4a2ua2
A:145-224
1b
d4a2ud2
D:145-224
1c
d4a2ue2
E:145-224
1d
d4a2uf2
F:145-224
1e
d4a2ug2
G:145-224
1f
d4a2uh2
H:145-224
1g
d4a2ub2
B:145-224
1h
d4a2uc2
C:145-224
Class
:
All beta proteins
(24004)
Fold
:
Double-stranded beta-helix
(580)
Superfamily
:
cAMP-binding domain-like
(99)
Family
:
automated matches
(17)
Protein domain
:
automated matches
(17)
Mycobacterium tuberculosis [TaxId: 1773]
(4)
2a
d4a2ua1
A:1-144
2b
d4a2uc1
C:1-144
2c
d4a2ud1
D:17-144
2d
d4a2ue1
E:1-144
2e
d4a2uf1
F:1-144
2f
d4a2ug1
G:1-144
2g
d4a2uh1
H:-2-144
2h
d4a2ub1
B:1-144
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CATH Domains
(0, 0)
Info
all CATH domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (292 KB)
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