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Getting 'Biological Unit' information from database.
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Getting 'Exon' information from database.
4A2O
Asym. Unit
Info
Asym.Unit (60 KB)
Biol.Unit 1 (107 KB)
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(1)
Title
:
STRUCTURE OF THE HUMAN EOSINOPHIL CATIONIC PROTEIN IN COMPLEX WITH SULFATE ANIONS
Authors
:
E. Boix, D. Pulido, M. Moussaoui, V. Nogues, S. Russi
Date
:
28 Sep 11 (Deposition) - 27 Jun 12 (Release) - 27 Jun 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.69
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (2x)
Keywords
:
Hydrolase, Oxidoreductase, Antimicrobial, Cytotoxic
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
E. Boix, D. Pulido, M. Moussaoui, V. Nogues, S. Russi
The Sulfate-Binding Site Structure Of The Human Eosinophil Cationic Protein As Revealed By A New Crystal Form.
J. Struct. Biol. V. 179 1 2012
[
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Hetero Components
(1, 14)
Info
All Hetero Components
1a: SULFATE ION (SO4a)
1b: SULFATE ION (SO4b)
1c: SULFATE ION (SO4c)
1d: SULFATE ION (SO4d)
1e: SULFATE ION (SO4e)
1f: SULFATE ION (SO4f)
1g: SULFATE ION (SO4g)
1h: SULFATE ION (SO4h)
1i: SULFATE ION (SO4i)
1j: SULFATE ION (SO4j)
1k: SULFATE ION (SO4k)
1l: SULFATE ION (SO4l)
1m: SULFATE ION (SO4m)
1n: SULFATE ION (SO4n)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
SO4
14
Ligand/Ion
SULFATE ION
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Sites
(14, 14)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:34 , ARG A:36 , LYS A:38 , ASN A:39 , HOH A:2074 , HOH A:2075 , ARG B:104
BINDING SITE FOR RESIDUE SO4 A1134
02
AC2
SOFTWARE
ARG A:1 , ARG A:7 , HOH A:2191
BINDING SITE FOR RESIDUE SO4 A1135
03
AC3
SOFTWARE
ARG A:77 , ARG A:104 , ARG B:36 , HOH B:2060
BINDING SITE FOR RESIDUE SO4 A1136
04
AC4
SOFTWARE
ARG A:121 , HOH A:2193 , HOH A:2194 , HOH A:2195 , VAL B:52 , PRO B:123
BINDING SITE FOR RESIDUE SO4 A1137
05
AC5
SOFTWARE
ARG A:28 , ASN A:32 , ARG A:61 , ARG A:66 , HOH A:2055 , HOH A:2112 , HOH A:2196 , HOH A:2197 , ARG B:22
BINDING SITE FOR RESIDUE SO4 A1138
06
AC6
SOFTWARE
ARG A:104 , ARG B:34 , LYS B:38 , ASN B:39 , HOH B:2061 , HOH B:2068 , HOH B:2072
BINDING SITE FOR RESIDUE SO4 B1134
07
AC7
SOFTWARE
GLN B:14 , LYS B:38 , HIS B:128 , HOH B:2016 , HOH B:2024 , HOH B:2058 , HOH B:2166 , HOH B:2167
BINDING SITE FOR RESIDUE SO4 B1135
08
AC8
SOFTWARE
ARG B:1 , ARG B:7 , HOH B:2170
BINDING SITE FOR RESIDUE SO4 B1136
09
AC9
SOFTWARE
ARG A:36 , HOH A:2068 , ARG B:77 , ARG B:104
BINDING SITE FOR RESIDUE SO4 B1137
10
BC1
SOFTWARE
ASN B:57 , GLN B:58 , ARG B:73 , ARG B:75 , HOH B:2091
BINDING SITE FOR RESIDUE SO4 B1138
11
BC2
SOFTWARE
ARG A:75 , HOH A:2096 , HOH A:2099 , ASN B:87 , PRO B:88 , GLY B:89 , HOH B:2119 , HOH B:2172
BINDING SITE FOR RESIDUE SO4 B1139
12
BC3
SOFTWARE
GLN A:58 , SER A:59 , HOH A:2110 , ARG B:97 , HOH B:2045 , HOH B:2134
BINDING SITE FOR RESIDUE SO4 B1140
13
BC4
SOFTWARE
HOH A:2044 , ARG B:28 , ASN B:32 , ARG B:61 , ARG B:66 , HOH B:2132 , HOH B:2173
BINDING SITE FOR RESIDUE SO4 B1141
14
BC5
SOFTWARE
ASN A:57 , GLN A:58 , ARG A:75 , HOH A:2101 , ASN B:87 , ALA B:90 , ARG B:97 , HOH B:2133 , HOH B:2174
BINDING SITE FOR RESIDUE SO4 B1142
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SAPs(SNPs)/Variants
(3, 6)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_014109 (R45C, chain A/B, )
2: VAR_013149 (R97R, chain A/B, )
3: VAR_029017 (G103R, chain A/B, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_014109
R
72
C
ECP_HUMAN
Polymorphism
151169198
A/B
R
45
C
2
UniProt
VAR_013149
T
124
R
ECP_HUMAN
Polymorphism
2073342
A/B
R
97
R
3
UniProt
VAR_029017
G
130
R
ECP_HUMAN
Polymorphism
12147890
A/B
G
103
R
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
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]
PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: RNASE_PANCREATIC (A:37-43,B:37-43)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RNASE_PANCREATIC
PS00127
Pancreatic ribonuclease family signature.
ECP_HUMAN
64-70
2
A:37-43
B:37-43
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Exons
(1, 2)
Info
All Exons
Exon 1.2 (A:1-133 | B:1-133)
View:
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All Exon Boundaries
1: Boundary 1.1/1.2
2: Boundary 1.2/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000304639
1
ENSE00001137146
chr14:
21359558-21359610
53
ECP_HUMAN
-
0
0
-
-
1.2
ENST00000304639
2
ENSE00001124180
chr14:
21359841-21360507
667
ECP_HUMAN
1-162
162
2
A:1-133
B:1-133
133
133
[
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d4a2oa_ (A:)
1b: SCOP_d4a2ob_ (B:)
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)
Protein Domains
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)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
RNase A-like
(356)
Superfamily
:
RNase A-like
(356)
Family
:
Ribonuclease A-like
(347)
Protein domain
:
Eosinophil cationic protein (ECP), ribonuclease 3
(7)
Human (Homo sapiens) [TaxId: 9606]
(7)
1a
d4a2oa_
A:
1b
d4a2ob_
B:
[
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CATH Domains
(0, 0)
Info
all CATH domains
View:
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Sorry, no Info available
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Pfam Domains
(0, 0)
Info
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Sorry, no Info available
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Protein & NOT Variant
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Protein & NOT PROSITE
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Chain B
Asymmetric Unit 1
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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