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Getting 'Exon' information from database.
3ZMQ
Asym. Unit
Info
Asym.Unit (89 KB)
Biol.Unit 1 (82 KB)
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(1)
Title
:
SRC-DERIVED MUTANT PEPTIDE INHIBITOR COMPLEX OF PTP1B
Authors
:
K. Temmerman, V. Pogenberg, C. Meyer, M. Koehn, M. Wilmanns
Date
:
12 Feb 13 (Deposition) - 22 Jan 14 (Release) - 02 Apr 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.30
Chains
:
Asym. Unit : A,C
Biol. Unit 1: A,C (1x)
Keywords
:
Hydrolase-Peptide Complex, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. Meyer, B. Hoeger, K. Temmerman, M. Tatarek-Nossol, V. Pogenberg, J. Bernhagen, M. Wilmanns, A. Kapurniotu, M. Kohn
Development Of Accessible Peptidic Tool Compounds To Study The Phosphatase Ptp1B In Intact Cells.
Acs Chem. Biol. V. 9 769 2014
[
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: DEOXY-DIFLUOROMETHELENE-PHOSPHOTYR... (FTYa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
FTY
1
Mod. Amino Acid
DEOXY-DIFLUOROMETHELENE-PHOSPHOTYROSINE
[
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Sites
(0, 0)
Info
All Sites
View:
Select:
Label:
Sorry, no Info available
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]
SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_076919 (E1K, chain C, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_076919
E
527
K
SRC_HUMAN
Disease (THC6)
879255268
C
E
1
K
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: TYR_PHOSPHATASE_2 (A:189-268)
2: TYR_PHOSPHATASE_1 (A:213-223)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
TYR_PHOSPHATASE_2
PS50056
Tyrosine specific protein phosphatases family profile.
PTN1_HUMAN
189-268
1
A:189-268
2
TYR_PHOSPHATASE_1
PS00383
Tyrosine specific protein phosphatases active site.
PTN1_HUMAN
213-223
1
A:213-223
[
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Exons
(8, 8)
Info
All Exons
Exon 1.1 (A:7-21)
Exon 1.2 (A:22-52)
Exon 1.3 (A:52-85)
Exon 1.4 (A:86-112)
Exon 1.5 (A:124-164)
Exon 1.6 (A:165-234 (gaps))
Exon 1.7 (A:235-279 (gaps))
Exon 2.17c (C:1-6)
View:
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All Exon Boundaries
01: Boundary -/1.1
02: Boundary 1.1/1.2
03: Boundary 1.2/1.3
04: Boundary 1.3/1.4
05: Boundary 1.4/1.5
06: Boundary 1.5/1.6
07: Boundary 1.6/1.7
08: Boundary 1.7/1.8
09: Boundary 2.16a/2.17c
10: Boundary 2.17c/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000371621
1
ENSE00001455721
chr20:
49126891-49127127
237
PTN1_HUMAN
1-21
21
1
A:7-21
15
1.2
ENST00000371621
2
ENSE00000509635
chr20:
49177900-49177990
91
PTN1_HUMAN
22-52
31
1
A:22-52
31
1.3
ENST00000371621
3
ENSE00000662794
chr20:
49181506-49181606
101
PTN1_HUMAN
52-85
34
1
A:52-85
34
1.4
ENST00000371621
4
ENSE00000662795
chr20:
49184917-49185015
99
PTN1_HUMAN
86-118
33
1
A:86-112
27
1.5
ENST00000371621
5
ENSE00000662796
chr20:
49191054-49191191
138
PTN1_HUMAN
119-164
46
1
A:124-164
41
1.6
ENST00000371621
6
ENSE00000662797
chr20:
49194957-49195166
210
PTN1_HUMAN
165-234
70
1
A:165-234 (gaps)
70
1.7
ENST00000371621
7
ENSE00000662798
chr20:
49195705-49195866
162
PTN1_HUMAN
235-288
54
1
A:235-279 (gaps)
45
1.8
ENST00000371621
8
ENSE00000662799
chr20:
49196240-49196463
224
PTN1_HUMAN
289-363
75
0
-
-
1.9
ENST00000371621
9
ENSE00001172461
chr20:
49197802-49197997
196
PTN1_HUMAN
363-428
66
0
-
-
1.10
ENST00000371621
10
ENSE00001455694
chr20:
49199229-49201299
2071
PTN1_HUMAN
429-435
7
0
-
-
2.2b
ENST00000373578
2b
ENSE00001460945
chr20:
35974557-35974658
102
SRC_HUMAN
-
0
0
-
-
2.3
ENST00000373578
3
ENSE00001460974
chr20:
35993607-35993680
74
SRC_HUMAN
-
0
0
-
-
2.4d
ENST00000373578
4d
ENSE00001460973
chr20:
36011022-36011190
169
SRC_HUMAN
-
0
0
-
-
2.6b
ENST00000373578
6b
ENSE00000661877
chr20:
36012553-36012806
254
SRC_HUMAN
1-84
84
0
-
-
2.7b
ENST00000373578
7b
ENSE00000661878
chr20:
36014478-36014577
100
SRC_HUMAN
84-117
34
0
-
-
2.9b
ENST00000373578
9b
ENSE00000661879
chr20:
36022298-36022396
99
SRC_HUMAN
117-150
34
0
-
-
2.9d
ENST00000373578
9d
ENSE00000661880
chr20:
36022577-36022680
104
SRC_HUMAN
150-185
36
0
-
-
2.10
ENST00000373578
10
ENSE00000661881
chr20:
36024565-36024714
150
SRC_HUMAN
185-235
51
0
-
-
2.12b
ENST00000373578
12b
ENSE00000661882
chr20:
36026102-36026257
156
SRC_HUMAN
235-287
53
0
-
-
2.13a
ENST00000373578
13a
ENSE00001654044
chr20:
36028518-36028697
180
SRC_HUMAN
287-347
61
0
-
-
2.14a
ENST00000373578
14a
ENSE00000800501
chr20:
36030005-36030081
77
SRC_HUMAN
347-372
26
0
-
-
2.15b
ENST00000373578
15b
ENSE00000661885
chr20:
36030838-36030991
154
SRC_HUMAN
373-424
52
0
-
-
2.16a
ENST00000373578
16a
ENSE00001785449
chr20:
36031152-36031283
132
SRC_HUMAN
424-468
45
0
-
-
2.17c
ENST00000373578
17c
ENSE00001460955
chr20:
36031574-36034453
2880
SRC_HUMAN
468-536
69
1
C:1-6
6
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SCOP Domains
(0, 0)
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Pfam Domains
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all PFAM domains
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Sorry, no Info available
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Asymmetric Unit 1
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