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Biol. Unit 2
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Asym.Unit (165 KB)
Biol.Unit 1 (81 KB)
Biol.Unit 2 (82 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF PHOSPHOAPANTETHEINE ADENYLYLTRANSFERASE PPAT/COAD WITH AMP-PNP FROM PSEUDOMONAS AERUGONOSA
Authors
:
R. Chatterjee, S. Datta
Date
:
20 Nov 14 (Deposition) - 25 Nov 15 (Release) - 04 May 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.55
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,D,E (1x)
Biol. Unit 2: B,C,F (1x)
Keywords
:
Rossmann Fold, Transferase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
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Reference
:
R. Chatterjee, A. Mondal, A. Basu, S. Datta
Transition Of Phosphopantetheine Adenylyltransferase From Catalytic To Allosteric State Is Characterized By Ternary Complex Formation In Pseudomonas Aeruginosa
Biochim. Biophys. Acta V. 1864 773 2016
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Hetero Components
(5, 17)
Info
All Hetero Components
1a: PHOSPHOAMINOPHOSPHONIC ACID-ADENYL... (ANPa)
1b: PHOSPHOAMINOPHOSPHONIC ACID-ADENYL... (ANPb)
1c: PHOSPHOAMINOPHOSPHONIC ACID-ADENYL... (ANPc)
1d: PHOSPHOAMINOPHOSPHONIC ACID-ADENYL... (ANPd)
1e: PHOSPHOAMINOPHOSPHONIC ACID-ADENYL... (ANPe)
1f: PHOSPHOAMINOPHOSPHONIC ACID-ADENYL... (ANPf)
2a: DIMETHYL SULFOXIDE (DMSa)
2b: DIMETHYL SULFOXIDE (DMSb)
2c: DIMETHYL SULFOXIDE (DMSc)
2d: DIMETHYL SULFOXIDE (DMSd)
2e: DIMETHYL SULFOXIDE (DMSe)
2f: DIMETHYL SULFOXIDE (DMSf)
2g: DIMETHYL SULFOXIDE (DMSg)
2h: DIMETHYL SULFOXIDE (DMSh)
2i: DIMETHYL SULFOXIDE (DMSi)
2j: DIMETHYL SULFOXIDE (DMSj)
2k: DIMETHYL SULFOXIDE (DMSk)
2l: DIMETHYL SULFOXIDE (DMSl)
2m: DIMETHYL SULFOXIDE (DMSm)
2n: DIMETHYL SULFOXIDE (DMSn)
2o: DIMETHYL SULFOXIDE (DMSo)
2p: DIMETHYL SULFOXIDE (DMSp)
3a: FORMIC ACID (FMTa)
3b: FORMIC ACID (FMTb)
3c: FORMIC ACID (FMTc)
3d: FORMIC ACID (FMTd)
3e: FORMIC ACID (FMTe)
3f: FORMIC ACID (FMTf)
4a: GLYCEROL (GOLa)
4b: GLYCEROL (GOLb)
5a: PHOSPHATE ION (PO4a)
5b: PHOSPHATE ION (PO4b)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ANP
3
Ligand/Ion
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2
DMS
7
Ligand/Ion
DIMETHYL SULFOXIDE
3
FMT
4
Ligand/Ion
FORMIC ACID
4
GOL
2
Ligand/Ion
GLYCEROL
5
PO4
1
Ligand/Ion
PHOSPHATE ION
[
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Sites
(21, 21)
Info
All Sites
01: AC2 (SOFTWARE)
02: AC4 (SOFTWARE)
03: AC5 (SOFTWARE)
04: AC6 (SOFTWARE)
05: AC7 (SOFTWARE)
06: AC8 (SOFTWARE)
07: AC9 (SOFTWARE)
08: BC1 (SOFTWARE)
09: BC2 (SOFTWARE)
10: BC3 (SOFTWARE)
11: BC4 (SOFTWARE)
12: BC5 (SOFTWARE)
13: BC6 (SOFTWARE)
14: BC7 (SOFTWARE)
15: BC8 (SOFTWARE)
16: BC9 (SOFTWARE)
17: CC7 (SOFTWARE)
18: DC2 (SOFTWARE)
19: DC3 (SOFTWARE)
20: DC4 (SOFTWARE)
21: DC5 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC2
SOFTWARE
ARG A:26 , LEU A:27 , ASN C:83 , ASP C:111
BINDING SITE FOR RESIDUE DMS A 1002
02
AC4
SOFTWARE
PRO A:110 , VAL A:112 , GLU A:113 , ARG C:23 , ARG C:26
BINDING SITE FOR RESIDUE PO4 A 1004
03
AC5
SOFTWARE
ASN A:83 , ASP A:111 , ARG C:26 , LEU C:27
BINDING SITE FOR RESIDUE DMS A 1005
04
AC6
SOFTWARE
TYR B:6 , THR B:9 , PHE B:10 , GLY B:16 , HIS B:17 , LEU B:20 , LYS B:41 , ARG B:87 , GLY B:88 , ARG B:90 , ASP B:94 , GLU B:98 , PRO B:119 , TYR B:123 , ILE B:126 , SER B:127 , SER B:128 , THR B:129 , HOH B:1102 , HOH B:1103
BINDING SITE FOR RESIDUE ANP B 1001
05
AC7
SOFTWARE
ALA B:36 , ALA B:37 , SER B:38 , PRO B:39 , PHE B:69 , THR B:71 , HOH B:1122
BINDING SITE FOR RESIDUE DMS B 1002
06
AC8
SOFTWARE
GLY B:8 , ALA B:36
BINDING SITE FOR RESIDUE DMS B 1003
07
AC9
SOFTWARE
ASN B:83 , ASP B:111 , LEU D:27
BINDING SITE FOR RESIDUE DMS B 1004
08
BC1
SOFTWARE
ARG B:156
BINDING SITE FOR RESIDUE FMT B 1005
09
BC2
SOFTWARE
ARG B:156
BINDING SITE FOR RESIDUE FMT B 1006
10
BC3
SOFTWARE
THR B:58 , LYS B:59 , LEU B:61 , VAL B:64
BINDING SITE FOR RESIDUE FMT B 1007
11
BC4
SOFTWARE
SER B:70 , THR B:71
BINDING SITE FOR RESIDUE FMT B 1008
12
BC5
SOFTWARE
TYR C:6 , THR C:9 , PHE C:10 , GLY C:16 , HIS C:17 , LEU C:20 , LYS C:41 , ARG C:87 , GLY C:88 , ARG C:90 , ASP C:94 , GLU C:98 , PRO C:119 , TYR C:123 , ILE C:126 , SER C:127 , SER C:128 , THR C:129 , HOH C:1102 , HOH C:1110
BINDING SITE FOR RESIDUE ANP C 1001
13
BC6
SOFTWARE
LYS C:15 , GLY C:18 , ASP C:19 , GLU C:22 , TYR C:123
BINDING SITE FOR RESIDUE DMS C 1002
14
BC7
SOFTWARE
LEU C:130
BINDING SITE FOR RESIDUE PO4 C 1003
15
BC8
SOFTWARE
PRO C:7 , GLY C:8 , ALA C:36 , ARG C:87
BINDING SITE FOR RESIDUE GOL C 1004
16
BC9
SOFTWARE
ASP C:29
BINDING SITE FOR RESIDUE GOL C 1005
17
CC7
SOFTWARE
ARG E:26 , LEU E:27 , ASN F:83 , ASP F:111
BINDING SITE FOR RESIDUE DMS E 1003
18
DC2
SOFTWARE
TYR F:6 , GLY F:8 , THR F:9 , PHE F:10 , GLY F:16 , HIS F:17 , LEU F:20 , ARG F:87 , GLY F:88 , ARG F:90 , GLU F:98 , PRO F:119 , TYR F:123 , ILE F:126 , SER F:127 , SER F:128 , THR F:129
BINDING SITE FOR RESIDUE ANP F 1001
19
DC3
SOFTWARE
LEU F:130 , ILE F:134
BINDING SITE FOR RESIDUE DMS F 1002
20
DC4
SOFTWARE
LEU F:72 , LEU F:101
BINDING SITE FOR RESIDUE DMS F 1003
21
DC5
SOFTWARE
LYS F:15 , GLY F:18 , ASP F:19 , TYR F:123 , HIS F:146
BINDING SITE FOR RESIDUE DMS F 1004
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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set fontsize 20
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Asym.Unit (165 KB)
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Header - Biol.Unit 2
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