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3TMH
Asym. Unit
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Asym.Unit (165 KB)
Biol.Unit 1 (310 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF DUAL-SPECIFIC A-KINASE ANCHORING PROTEIN 2 IN COMPLEX WITH CAMP-DEPENDENT PROTEIN KINASE A TYPE II ALPHA AND PDZK1
Authors
:
G. N. Sarma, R. H. Phan, B. Sankaran, S. S. Taylor
Date
:
31 Aug 11 (Deposition) - 05 Sep 12 (Release) - 05 Sep 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.80
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,L
Biol. Unit 1: A,B,C,D,E,F,G,H,I,L (2x)
Keywords
:
Alpha Helical Bundle, Pdz Fold, Anchoring Protein, Pka, Pdz Proteins, Membrane, Transport Protein-Signaling Protein Complex
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
G. N. Sarma, R. H. Phan, B. Sankaran, S. S. Taylor
Differential Mode Of D-Akap2 To Pka Isoforms: Insights From D-Akap2 Pka Rii Pdzk1 Ternary Complex Structure
To Be Published
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Hetero Components
(0, 0)
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Sites
(0, 0)
Info
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SAPs(SNPs)/Variants
(1, 3)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_024608 (V646V, chain D/H/L, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_024608
I
646
V
AKA10_HUMAN
Polymorphism
203462
D/H/L
V
646
V
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 3)
Info
All PROSITE Patterns/Profiles
1: PDZ (-|-|-|A:378-456,E:378-456,I:378-45...)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PDZ
PS50106
PDZ domain profile.
NHRF3_HUMAN
9-90
134-215
243-323
378-458
3
-
-
-
A:378-456
E:378-456
I:378-456
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Exons
(2, 6)
Info
All Exons
Exon 1.9a (A:375-405 | E:375-405 | I:375-405)
Exon 1.10a (A:406-456 | E:406-456 | I:406-456)
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All Exon Boundaries
1: Boundary 1.8/1.9a
2: Boundary 1.9a/1.10a
3: Boundary 1.10a/1.12d
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.3
ENST00000344770
3
ENSE00001411267
chr1:
145743263-145743333
71
NHRF3_HUMAN
-
0
0
-
-
1.4b
ENST00000344770
4b
ENSE00001372163
chr1:
145747042-145747253
212
NHRF3_HUMAN
1-70
70
0
-
-
1.5
ENST00000344770
5
ENSE00001759427
chr1:
145748338-145748587
250
NHRF3_HUMAN
71-154
84
0
-
-
1.6
ENST00000344770
6
ENSE00001710717
chr1:
145752428-145752564
137
NHRF3_HUMAN
154-199
46
0
-
-
1.7
ENST00000344770
7
ENSE00002188888
chr1:
145753955-145754150
196
NHRF3_HUMAN
200-265
66
0
-
-
1.8
ENST00000344770
8
ENSE00001787521
chr1:
145756417-145756613
197
NHRF3_HUMAN
265-330
66
0
-
-
1.9a
ENST00000344770
9a
ENSE00001784849
chr1:
145761178-145761402
225
NHRF3_HUMAN
331-405
75
3
A:375-405
E:375-405
I:375-405
31
31
31
1.10a
ENST00000344770
10a
ENSE00001706980
chr1:
145762039-145762329
291
NHRF3_HUMAN
406-502
97
3
A:406-456
E:406-456
I:406-456
51
51
51
1.12d
ENST00000344770
12d
ENSE00001365469
chr1:
145763570-145764074
505
NHRF3_HUMAN
503-519
17
0
-
-
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CATH Domains
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Pfam Domains
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