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3TM9
Asym. Unit
Info
Asym.Unit (86 KB)
Biol.Unit 1 (155 KB)
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(1)
Title
:
Y29A MUTANT OF VITREOSCILLA STERCORARIA HEMOGLOBIN
Authors
:
S. Ratakonda, A. Anand, K. Dikshit, B. C. Stark, A. J. Howard
Date
:
31 Aug 11 (Deposition) - 16 Apr 14 (Release) - 16 Apr 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.72
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
Globin 8-Helix Fold, Oxygen Storage, Oxygen Transport
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Ratakonda, A. Anand, K. Dikshit, B. C. Stark, A. J. Howard
Crystallographic Structure Determination Of B10 Mutants Of Vitreoscilla Hemoglobin: Role Of Tyr29 (B10) In The Structure Of The Ligand-Binding Site.
Acta Crystallogr. , Sect. F V. 69 215 2013
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Hetero Components
(2, 13)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
1e: 1,2-ETHANEDIOL (EDOe)
1f: 1,2-ETHANEDIOL (EDOf)
1g: 1,2-ETHANEDIOL (EDOg)
1h: 1,2-ETHANEDIOL (EDOh)
1i: 1,2-ETHANEDIOL (EDOi)
1j: 1,2-ETHANEDIOL (EDOj)
1k: 1,2-ETHANEDIOL (EDOk)
1l: 1,2-ETHANEDIOL (EDOl)
2a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
View:
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No.
Name
Count
Type
Full Name
1
EDO
12
Ligand/Ion
1,2-ETHANEDIOL
2
HEM
1
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
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Sites
(11, 11)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
LEU A:42 , PHE A:43 , GLN A:53 , ALA A:56 , LEU A:57 , THR A:60 , ILE A:81 , LYS A:84 , HIS A:85 , TYR A:95 , VAL A:98 , TYR A:126 , PHE A:133 , HOH A:311 , HOH A:407 , HOH A:409
BINDING SITE FOR RESIDUE HEM A 201
02
AC2
SOFTWARE
LYS A:107 , THR A:115 , ASP A:116 , EDO A:207 , HOH A:348 , HOH A:352 , HOH A:373
BINDING SITE FOR RESIDUE EDO A 203
03
AC3
SOFTWARE
THR A:23 , THR A:27 , LYS A:30 , VAL A:145
BINDING SITE FOR RESIDUE EDO A 204
04
AC4
SOFTWARE
GLN A:4 , GLN A:5 , HOH A:366
BINDING SITE FOR RESIDUE EDO A 205
05
AC5
SOFTWARE
LYS A:79 , HOH A:389
BINDING SITE FOR RESIDUE EDO A 206
06
AC6
SOFTWARE
THR A:27 , LYS A:107 , GLU A:108 , GLY A:111 , ASP A:112 , EDO A:203 , HOH A:364
BINDING SITE FOR RESIDUE EDO A 207
07
AC7
SOFTWARE
PRO A:76 , LYS A:79 , HOH A:305 , HOH A:378
BINDING SITE FOR RESIDUE EDO A 209
08
AC8
SOFTWARE
GLY A:127 , ASP A:131 , EDO A:212 , HOH A:387
BINDING SITE FOR RESIDUE EDO A 210
09
AC9
SOFTWARE
MET A:1 , GLN A:135
BINDING SITE FOR RESIDUE EDO A 211
10
BC1
SOFTWARE
TYR A:95 , GLY A:127 , ASP A:131 , EDO A:210 , HOH A:377
BINDING SITE FOR RESIDUE EDO A 212
11
BC2
SOFTWARE
HOH A:337
BINDING SITE FOR RESIDUE EDO A 213
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: GLOBIN (A:1-135)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GLOBIN
PS01033
Globin family profile.
BAHG_VITST
1-135
1
A:1-135
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Exons
(0, 0)
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All Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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