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3SWN
Asym. Unit
Info
Asym.Unit (146 KB)
Biol.Unit 1 (72 KB)
Biol.Unit 2 (71 KB)
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(1)
Title
:
STRUCTURE OF THE LSM657 COMPLEX: AN ASSEMBLY INTERMEDIATE OF THE LSM1 7 AND LSM2 8 RINGS
Authors
:
M. Mund, A. Neu, J. L. Ullmann, U. Neu, R. Sprangers
Date
:
14 Jul 11 (Deposition) - 26 Oct 11 (Release) - 12 Nov 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B,C,D,E,F,O,P,Q,R,S,T
Biol. Unit 1: A,B,C,D,E,F (1x)
Biol. Unit 2: O,P,Q,R,S,T (1x)
Keywords
:
Sm, Rna Metabolism, Rna, Nuclear, Rna Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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)
Reference
:
M. Mund, A. Neu, J. Ullmann, U. Neu, R. Sprangers
Structure Of The Lsm657 Complex: An Assembly Intermediate O The Lsm1-7 And Lsm2-8 Rings.
J. Mol. Biol. V. 414 165 2011
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Hetero Components
(1, 16)
Info
All Hetero Components
1a: ZINC ION (ZNa)
1b: ZINC ION (ZNb)
1c: ZINC ION (ZNc)
1d: ZINC ION (ZNd)
1e: ZINC ION (ZNe)
1f: ZINC ION (ZNf)
1g: ZINC ION (ZNg)
1h: ZINC ION (ZNh)
1i: ZINC ION (ZNi)
1j: ZINC ION (ZNj)
1k: ZINC ION (ZNk)
1l: ZINC ION (ZNl)
1m: ZINC ION (ZNm)
1n: ZINC ION (ZNn)
1o: ZINC ION (ZNo)
1p: ZINC ION (ZNp)
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No.
Name
Count
Type
Full Name
1
ZN
16
Ligand/Ion
ZINC ION
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Sites
(16, 16)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP C:62
BINDING SITE FOR RESIDUE ZN C 114
02
AC2
SOFTWARE
GLU A:49 , GLU A:58 , HIS A:60 , TYR B:69
BINDING SITE FOR RESIDUE ZN A 81
03
AC3
SOFTWARE
GLU B:43 , ASP B:59 , HOH B:80 , HOH B:81 , HOH B:82
BINDING SITE FOR RESIDUE ZN B 76
04
AC4
SOFTWARE
SER B:32 , CYS B:33 , HOH B:78
BINDING SITE FOR RESIDUE ZN B 77
05
AC5
SOFTWARE
ASP F:63
BINDING SITE FOR RESIDUE ZN F 114
06
AC6
SOFTWARE
CYS B:33 , ASP F:27
BINDING SITE FOR RESIDUE ZN F 115
07
AC7
SOFTWARE
GLU D:49 , GLU D:58 , HIS D:60 , ARG E:20 , TYR E:69
BINDING SITE FOR RESIDUE ZN D 81
08
AC8
SOFTWARE
GLU D:9
BINDING SITE FOR RESIDUE ZN D 82
09
AC9
SOFTWARE
ASP O:62
BINDING SITE FOR RESIDUE ZN O 114
10
BC1
SOFTWARE
GLU P:49 , GLU P:58 , HIS P:60 , TYR Q:69
BINDING SITE FOR RESIDUE ZN P 81
11
BC2
SOFTWARE
ASP P:12
BINDING SITE FOR RESIDUE ZN P 82
12
BC3
SOFTWARE
GLU Q:43 , ASP Q:59 , HOH Q:78 , HOH Q:79 , HOH Q:82
BINDING SITE FOR RESIDUE ZN Q 76
13
BC4
SOFTWARE
SER Q:32 , CYS Q:33 , HOH Q:81 , HOH Q:85
BINDING SITE FOR RESIDUE ZN Q 77
14
BC5
SOFTWARE
ASP R:63
BINDING SITE FOR RESIDUE ZN R 114
15
BC6
SOFTWARE
CYS Q:33 , ASP R:27
BINDING SITE FOR RESIDUE ZN R 115
16
BC7
SOFTWARE
GLU S:49 , GLU S:58 , HIS S:60 , ARG T:20 , TYR T:69
BINDING SITE FOR RESIDUE ZN S 81
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 8)
Info
All SCOP Domains
1a: SCOP_d3swna_ (A:)
1b: SCOP_d3swnb_ (B:)
1c: SCOP_d3swnd_ (D:)
1d: SCOP_d3swne_ (E:)
1e: SCOP_d3swnp_ (P:)
1f: SCOP_d3swnq_ (Q:)
1g: SCOP_d3swns_ (S:)
1h: SCOP_d3swnt_ (T:)
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Protein Domains
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Organisms
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Class
:
All beta proteins
(24004)
Fold
:
Sm-like fold
(103)
Superfamily
:
Sm-like ribonucleoproteins
(95)
Family
:
automated matches
(22)
Protein domain
:
automated matches
(22)
Schizosaccharomyces pombe [TaxId: 284812]
(4)
1a
d3swna_
A:
1b
d3swnb_
B:
1c
d3swnd_
D:
1d
d3swne_
E:
1e
d3swnp_
P:
1f
d3swnq_
Q:
1g
d3swns_
S:
1h
d3swnt_
T:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (146 KB)
Header - Asym.Unit
Biol.Unit 1 (72 KB)
Header - Biol.Unit 1
Biol.Unit 2 (71 KB)
Header - Biol.Unit 2
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