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3SH1
Biol. Unit 1
Info
Asym.Unit (390 KB)
Biol.Unit 1 (193 KB)
Biol.Unit 2 (190 KB)
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(1)
Title
:
AC-ACHBP LIGAND BINDING DOMAIN MUTATED TO HUMAN ALPHA-7 NACHR
Authors
:
A. Nemecz, P. W. Taylor
Date
:
15 Jun 11 (Deposition) - 26 Oct 11 (Release) - 17 Jul 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.90
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J
Biol. Unit 1: A,B,C,D,E (1x)
Biol. Unit 2: F,G,H,I,J (1x)
Keywords
:
Human Nicotinic Acetylcholine Receptor Binding Protein, Methyllycaconitine Binding, Glycosylation, Receptor
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Nemecz, P. Taylor
Creating An Alpha-7 Nicotinic Acetylcholine Recognition Domain From The Acetylcholine Binding Protein: Crystallographic And Ligand Selectivity Analyses
J. Biol. Chem. V. 286 42555 2011
[
close entry info
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Hetero Components
(4, 22)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
2a: BETA-D-MANNOSE (BMAa)
2b: BETA-D-MANNOSE (BMAb)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
3c: MAGNESIUM ION (MGc)
3d: MAGNESIUM ION (MGd)
3e: MAGNESIUM ION (MGe)
4a: METHYLLYCACONITINE (MLKa)
4b: METHYLLYCACONITINE (MLKb)
4c: METHYLLYCACONITINE (MLKc)
4d: METHYLLYCACONITINE (MLKd)
4e: METHYLLYCACONITINE (MLKe)
4f: METHYLLYCACONITINE (MLKf)
4g: METHYLLYCACONITINE (MLKg)
4h: METHYLLYCACONITINE (MLKh)
4i: METHYLLYCACONITINE (MLKi)
4j: METHYLLYCACONITINE (MLKj)
5a: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDa)
5b: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDb)
5c: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDc)
5d: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDd)
5e: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDe)
5f: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDf)
5g: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDg)
6a: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDa)
6b: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDb)
6c: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDc)
6d: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDd)
6e: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDe)
7a: N-ACETYL-D-GLUCOSAMINE (NAGa)
7b: N-ACETYL-D-GLUCOSAMINE (NAGb)
7c: N-ACETYL-D-GLUCOSAMINE (NAGc)
7d: N-ACETYL-D-GLUCOSAMINE (NAGd)
7e: N-ACETYL-D-GLUCOSAMINE (NAGe)
7f: N-ACETYL-D-GLUCOSAMINE (NAGf)
7g: N-ACETYL-D-GLUCOSAMINE (NAGg)
7h: N-ACETYL-D-GLUCOSAMINE (NAGh)
7i: N-ACETYL-D-GLUCOSAMINE (NAGi)
7j: N-ACETYL-D-GLUCOSAMINE (NAGj)
7k: N-ACETYL-D-GLUCOSAMINE (NAGk)
7l: N-ACETYL-D-GLUCOSAMINE (NAGl)
7m: N-ACETYL-D-GLUCOSAMINE (NAGm)
7n: N-ACETYL-D-GLUCOSAMINE (NAGn)
7o: N-ACETYL-D-GLUCOSAMINE (NAGo)
7p: N-ACETYL-D-GLUCOSAMINE (NAGp)
7q: N-ACETYL-D-GLUCOSAMINE (NAGq)
7r: N-ACETYL-D-GLUCOSAMINE (NAGr)
7s: N-ACETYL-D-GLUCOSAMINE (NAGs)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
-1
Ligand/Ion
ACETATE ION
2
BMA
-1
Ligand/Ion
BETA-D-MANNOSE
3
MG
-1
Ligand/Ion
MAGNESIUM ION
4
MLK
5
Ligand/Ion
METHYLLYCACONITINE
5
MPD
3
Ligand/Ion
(4S)-2-METHYL-2,4-PENTANEDIOL
6
MRD
4
Ligand/Ion
(4R)-2-METHYLPENTANE-2,4-DIOL
7
NAG
10
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
[
close Hetero Component info
]
Sites
(27, 27)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: EC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:-3 , HIS A:1 , ASP G:-3 , HIS G:1
BINDING SITE FOR RESIDUE MG A 222
02
AC2
SOFTWARE
ASN A:110 , SER A:112 , GLN A:116 , NAG A:251
BINDING SITE FOR RESIDUE NAG A 250
03
AC3
SOFTWARE
NAG A:250
BINDING SITE FOR RESIDUE NAG A 251
04
AC4
SOFTWARE
TYR A:93 , SER A:94 , LYS A:143 , SER A:146 , TRP A:147 , TYR A:149 , ARG A:186 , TYR A:195 , ASP A:197 , LEU E:38 , TRP E:55 , GLN E:116 , LEU E:118 , SER E:167
BINDING SITE FOR RESIDUE MLK A 301
05
AC5
SOFTWARE
TRP A:86 , TYR A:149 , LYS E:10
BINDING SITE FOR RESIDUE MRD A 305
06
AC6
SOFTWARE
THR A:80 , SER A:81 , ASN A:106 , TRP B:86 , THR B:87 , TYR B:149
BINDING SITE FOR RESIDUE MPD A 223
07
AC7
SOFTWARE
ALA A:82 , ALA A:83 , ILE A:85 , THR A:87
BINDING SITE FOR RESIDUE MPD A 306
08
AC8
SOFTWARE
ASP B:-3 , HIS B:1 , ASP F:-3 , HIS F:1
BINDING SITE FOR RESIDUE MG B 222
09
AC9
SOFTWARE
ASN B:110 , SER B:111 , SER B:112 , HIS B:114
BINDING SITE FOR RESIDUE NAG B 250
10
BC1
SOFTWARE
ASN B:74 , LYS C:25
BINDING SITE FOR RESIDUE NAG B 275
11
BC2
SOFTWARE
TRP A:55 , LEU A:118 , SER A:167 , TYR B:93 , LYS B:143 , SER B:146 , TRP B:147 , TYR B:149 , ARG B:186 , TYR B:188 , TYR B:195 , ASP B:197
BINDING SITE FOR RESIDUE MLK B 301
12
BC3
SOFTWARE
THR B:80 , SER B:81 , ASN B:106 , TRP C:86 , TYR C:149
BINDING SITE FOR RESIDUE MRD B 305
13
BC4
SOFTWARE
ASP C:-3 , HIS C:1 , ASP J:-3 , HIS J:1
BINDING SITE FOR RESIDUE MG C 222
14
BC5
SOFTWARE
THR C:76 , ASN C:110 , SER C:112 , HIS C:114
BINDING SITE FOR RESIDUE NAG C 250
15
BC6
SOFTWARE
TRP B:55 , GLN B:116 , LEU B:118 , SER B:167 , TYR C:93 , LYS C:143 , TRP C:147 , TYR C:149 , ARG C:186 , TYR C:188 , TYR C:195 , ASP C:197 , HOH C:333
BINDING SITE FOR RESIDUE MLK C 301
16
BC7
SOFTWARE
ASP C:12 , LEU C:13 , ARG C:16 , SER C:64 , MET C:66 , TRP C:67 , TYR C:72
BINDING SITE FOR RESIDUE MPD C 306
17
BC8
SOFTWARE
ASN C:106 , TRP D:86 , TYR D:149
BINDING SITE FOR RESIDUE MRD D 305
18
BC9
SOFTWARE
THR D:76 , ASN D:110 , SER D:111 , SER D:112 , HIS D:114 , NAG D:251
BINDING SITE FOR RESIDUE NAG D 250
19
CC1
SOFTWARE
NAG D:250
BINDING SITE FOR RESIDUE NAG D 251
20
CC2
SOFTWARE
TRP C:55 , GLN C:116 , LEU C:118 , SER C:167 , TYR D:93 , LYS D:143 , TRP D:147 , TYR D:149 , TYR D:188 , TYR D:195 , ASP D:197
BINDING SITE FOR RESIDUE MLK D 301
21
CC3
SOFTWARE
ASP E:-3 , HIS E:1 , ASP H:-3 , HIS H:1
BINDING SITE FOR RESIDUE MG E 222
22
CC4
SOFTWARE
THR E:76 , ASN E:110 , SER E:112 , HIS E:114 , NAG E:251
BINDING SITE FOR RESIDUE NAG E 250
23
CC5
SOFTWARE
NAG E:250 , HOH E:327
BINDING SITE FOR RESIDUE NAG E 251
24
CC6
SOFTWARE
TRP E:86 , TYR E:149
BINDING SITE FOR RESIDUE MRD E 305
25
CC7
SOFTWARE
ASN E:74 , THR E:76
BINDING SITE FOR RESIDUE NAG E 275
26
CC8
SOFTWARE
TRP D:55 , LEU D:118 , SER D:167 , TYR E:93 , LYS E:143 , SER E:146 , TRP E:147 , SER E:148 , TYR E:149 , ARG E:186 , TYR E:188 , TYR E:195 , ASP E:197
BINDING SITE FOR RESIDUE MLK E 301
27
EC3
SOFTWARE
ASP D:-3 , HIS D:1 , ASP I:-3 , HIS I:1
BINDING SITE FOR RESIDUE MG I 222
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(, 0)
Info
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 10)
Info
All SCOP Domains
1a: SCOP_d3sh1a_ (A:)
1b: SCOP_d3sh1b_ (B:)
1c: SCOP_d3sh1c_ (C:)
1d: SCOP_d3sh1d_ (D:)
1e: SCOP_d3sh1e_ (E:)
1f: SCOP_d3sh1f_ (F:)
1g: SCOP_d3sh1g_ (G:)
1h: SCOP_d3sh1h_ (H:)
1i: SCOP_d3sh1i_ (I:)
1j: SCOP_d3sh1j_ (J:)
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Classes
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Protein Domains
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(
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Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Nicotinic receptor ligand binding domain-like
(58)
Superfamily
:
Nicotinic receptor ligand binding domain-like
(58)
Family
:
automated matches
(40)
Protein domain
:
automated matches
(40)
California sea hare (Aplysia californica) [TaxId: 6500]
(36)
1a
d3sh1a_
A:
1b
d3sh1b_
B:
1c
d3sh1c_
C:
1d
d3sh1d_
D:
1e
d3sh1e_
E:
1f
d3sh1f_
F:
1g
d3sh1g_
G:
1h
d3sh1h_
H:
1i
d3sh1i_
I:
1j
d3sh1j_
J:
[
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
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