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3RPN
Asym. Unit
Info
Asym.Unit (472 KB)
Biol.Unit 1 (158 KB)
Biol.Unit 2 (160 KB)
Biol.Unit 3 (157 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN KAPPA CLASS GLUTATHIONE TRANSFERASE IN COMPLEX WITH S-HEXYLGLUTATHIONE
Authors
:
B. Wang, Y. Peng, T. Zhang, J. Ding
Date
:
27 Apr 11 (Deposition) - 13 Jul 11 (Release) - 03 Jul 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,D (1x)
Biol. Unit 2: B,E (1x)
Biol. Unit 3: C,F (1x)
Keywords
:
Kappa Gst, Trx Domain, Gsh Binding, Detoxification, Gtx, Glutathione Transferase Inhibitor Complex, Transferase-Transferase Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
B. Wang, Y. Peng, T. Zhang, J. Ding
Crystal Structures And Kinetic Studies Of Human Kappa Class Glutathione Transferase Provide Insights Into The Catalytic Mechanism.
Biochem. J. V. 439 215 2011
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Hetero Components
(1, 6)
Info
All Hetero Components
1a: S-HEXYLGLUTATHIONE (GTXa)
1b: S-HEXYLGLUTATHIONE (GTXb)
1c: S-HEXYLGLUTATHIONE (GTXc)
1d: S-HEXYLGLUTATHIONE (GTXd)
1e: S-HEXYLGLUTATHIONE (GTXe)
1f: S-HEXYLGLUTATHIONE (GTXf)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GTX
6
Ligand/Ion
S-HEXYLGLUTATHIONE
[
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
LEU A:15 , SER A:16 , PRO A:17 , TYR A:18 , ILE A:44 , ASN A:53 , PRO A:56 , MET A:66 , LEU A:88 , MET A:91 , PHE A:181 , GLY A:182 , LEU A:183 , PHE A:198 , GLY A:199 , SER A:200 , ASP A:201 , HOH A:269 , HOH A:670 , LYS D:62 , ARG D:202
BINDING SITE FOR RESIDUE GTX A 302
2
AC2
SOFTWARE
LEU B:15 , SER B:16 , PRO B:17 , TYR B:18 , ASN B:53 , PRO B:56 , LEU B:88 , MET B:91 , LEU B:92 , PHE B:181 , GLY B:182 , LEU B:183 , PHE B:198 , GLY B:199 , SER B:200 , ASP B:201 , LYS E:62 , ARG E:202
BINDING SITE FOR RESIDUE GTX B 301
3
AC3
SOFTWARE
LEU C:15 , SER C:16 , PRO C:17 , TYR C:18 , ILE C:44 , ASN C:53 , PRO C:56 , MET C:91 , LEU C:92 , PHE C:181 , GLY C:182 , LEU C:183 , PHE C:198 , GLY C:199 , SER C:200 , ASP C:201 , HOH C:365 , HOH C:426 , LYS F:62 , ARG F:202
BINDING SITE FOR RESIDUE GTX C 301
4
AC4
SOFTWARE
LYS A:62 , ARG A:202 , SER D:16 , PRO D:17 , TYR D:18 , ILE D:44 , ASN D:53 , PRO D:56 , MET D:66 , LEU D:88 , GLY D:182 , LEU D:183 , PHE D:198 , GLY D:199 , SER D:200 , ASP D:201 , HOH D:523 , HOH D:530 , HOH D:593
BINDING SITE FOR RESIDUE GTX D 302
5
AC5
SOFTWARE
LYS B:62 , ARG B:202 , SER E:16 , TYR E:18 , ASN E:53 , MET E:66 , LEU E:88 , GLY E:182 , LEU E:183 , PHE E:198 , GLY E:199 , SER E:200 , ASP E:201 , HOH E:337 , HOH E:695
BINDING SITE FOR RESIDUE GTX E 302
6
AC6
SOFTWARE
LYS C:62 , ARG C:202 , SER F:16 , PRO F:17 , TYR F:18 , ASN F:53 , PRO F:56 , MET F:66 , LEU F:88 , TRP F:126 , GLY F:182 , LEU F:183 , PHE F:198 , GLY F:199 , SER F:200 , ASP F:201 , HOH F:241
BINDING SITE FOR RESIDUE GTX F 302
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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Label:
End label:
Sorry, no Info available
[
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Exons
(8, 48)
Info
All Exons
Exon 1.3c (A:2-24 | B:2-24 | C:2-24 | D:2-24 ...)
Exon 1.3i (A:25-52 | B:25-52 | C:25-52 | D:25...)
Exon 1.3k (A:52-95 | B:52-95 | C:52-95 | D:52...)
Exon 1.3n (A:95-128 | B:95-128 | C:95-128 | D...)
Exon 1.3p (A:129-140 | B:129-140 | C:129-140 ...)
Exon 1.4 (A:141-179 | B:141-179 | C:141-179 ...)
Exon 1.5 (A:180-211 | B:180-211 | C:180-211 ...)
Exon 1.6e (A:211-221 | B:211-221 | C:211-221 ...)
View:
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All Exon Boundaries
1: Boundary -/1.3c
2: Boundary 1.3c/1.3i
3: Boundary 1.3i/1.3k
4: Boundary 1.3k/1.3n
5: Boundary 1.3n/1.3p
6: Boundary 1.3p/1.4
7: Boundary 1.4/1.5
8: Boundary 1.5/1.6e
9: Boundary 1.6e/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.3c
ENST00000358406
3c
ENSE00001893107
chr7:
142960536-142960678
143
GSTK1_HUMAN
1-24
24
6
A:2-24
B:2-24
C:2-24
D:2-24
E:2-24
F:2-24
23
23
23
23
23
23
1.3i
ENST00000358406
3i
ENSE00002108841
chr7:
142961179-142961260
82
GSTK1_HUMAN
25-52
28
6
A:25-52
B:25-52
C:25-52
D:25-52
E:25-52
F:25-52
28
28
28
28
28
28
1.3k
ENST00000358406
3k
ENSE00002119390
chr7:
142961641-142961769
129
GSTK1_HUMAN
52-95
44
6
A:52-95
B:52-95
C:52-95
D:52-95
E:52-95
F:52-95
44
44
44
44
44
44
1.3n
ENST00000358406
3n
ENSE00002154510
chr7:
142962085-142962185
101
GSTK1_HUMAN
95-128
34
6
A:95-128
B:95-128
C:95-128
D:95-128
E:95-128
F:95-128
34
34
34
34
34
34
1.3p
ENST00000358406
3p
ENSE00000728805
chr7:
142962354-142962389
36
GSTK1_HUMAN
129-140
12
6
A:129-140
B:129-140
C:129-140
D:129-140
E:129-140
F:129-140
12
12
12
12
12
12
1.4
ENST00000358406
4
ENSE00002108718
chr7:
142964710-142964826
117
GSTK1_HUMAN
141-179
39
6
A:141-179
B:141-179
C:141-179
D:141-179
E:141-179
F:141-179
39
39
39
39
39
39
1.5
ENST00000358406
5
ENSE00002091099
chr7:
142965184-142965277
94
GSTK1_HUMAN
180-211
32
6
A:180-211
B:180-211
C:180-211
D:180-211
E:180-211
F:180-211
32
32
32
32
32
32
1.6e
ENST00000358406
6e
ENSE00001789738
chr7:
142965881-142966222
342
GSTK1_HUMAN
211-226
16
6
A:211-221
B:211-221
C:211-221
D:211-221
E:211-221
F:211-221
11
11
11
11
11
11
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SCOP Domains
(1, 6)
Info
All SCOP Domains
1a: SCOP_d3rpna_ (A:)
1b: SCOP_d3rpnb_ (B:)
1c: SCOP_d3rpnc_ (C:)
1d: SCOP_d3rpnd_ (D:)
1e: SCOP_d3rpne_ (E:)
1f: SCOP_d3rpnf_ (F:)
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Protein Domains
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(
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Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thioredoxin fold
(994)
Superfamily
:
Thioredoxin-like
(992)
Family
:
DsbA-like
(29)
Protein domain
:
automated matches
(10)
Human (Homo sapiens) [TaxId: 9606]
(3)
1a
d3rpna_
A:
1b
d3rpnb_
B:
1c
d3rpnc_
C:
1d
d3rpnd_
D:
1e
d3rpne_
E:
1f
d3rpnf_
F:
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CATH Domains
(0, 0)
Info
all CATH domains
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Pfam Domains
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Asym.Unit (472 KB)
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