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3Q6S
Asym. Unit
Info
Asym.Unit (107 KB)
Biol.Unit 1 (53 KB)
Biol.Unit 2 (51 KB)
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(1)
Title
:
THE CRYSTAL STRUCTURE OF THE HETEROCHROMATIN PROTEIN 1 BETA CHROMOSHADOW DOMAIN COMPLEXED WITH A PEPTIDE FROM SHUGOSHIN 1
Authors
:
C. A. Brautigam, J. Chaudhary, H. Yu
Date
:
03 Jan 11 (Deposition) - 14 Dec 11 (Release) - 13 Feb 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.93
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,D,F (1x)
Biol. Unit 2: B,C,E (1x)
Keywords
:
Incenp, Heterochromatin, Centromere, Cell Cycle
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Kang, J. Chaudhary, H. Dong, S. Kim, C. A. Brautigam, H. Yu
Mitotic Centromeric Targeting Of Hp1 And Its Binding To Sgo Are Dispensable For Sister-Chromatid Cohesion In Human Cells.
Mol Biol Cell V. 22 1181 2011
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: CHROMO_2 (-|A:117-174,B:117-175,C:117-173,D:...)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CHROMO_2
PS50013
Chromo and chromo shadow domain profile.
CBX1_HUMAN
21-79
117-175
4
-
A:117-174
B:117-175
C:117-173
D:117-174
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Exons
(2, 8)
Info
All Exons
Exon 1.7b (A:109-138 | B:109-138 | C:110-138 ...)
Exon 1.8c (A:138-174 | B:138-175 | C:138-173 ...)
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All Exon Boundaries
1: Boundary 1.6a/1.7b
2: Boundary 1.7b/1.8c
3: Boundary 1.8c/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2
ENST00000393408
2
ENSE00001515177
chr17:
46178560-46178117
444
CBX1_HUMAN
-
0
0
-
-
1.5
ENST00000393408
5
ENSE00002178956
chr17:
46154403-46154227
177
CBX1_HUMAN
1-47
47
0
-
-
1.6a
ENST00000393408
6a
ENSE00000735652
chr17:
46153540-46153363
178
CBX1_HUMAN
47-106
60
0
-
-
1.7b
ENST00000393408
7b
ENSE00000735651
chr17:
46152462-46152368
95
CBX1_HUMAN
107-138
32
4
A:109-138
B:109-138
C:110-138
D:110-138
30
30
29
29
1.8c
ENST00000393408
8c
ENSE00001824299
chr17:
46148941-46147414
1528
CBX1_HUMAN
138-185
48
4
A:138-174
B:138-175
C:138-173
D:138-174
37
38
36
37
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SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d3q6sa_ (A:)
1b: SCOP_d3q6sb_ (B:)
1c: SCOP_d3q6sc_ (C:)
1d: SCOP_d3q6sd_ (D:)
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Class
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All beta proteins
(24004)
Fold
:
SH3-like barrel
(1035)
Superfamily
:
Chromo domain-like
(82)
Family
:
Chromo domain
(41)
Protein domain
:
Heterochromatin protein 1, HP1
(11)
Human (Homo sapiens) [TaxId: 9606]
(3)
1a
d3q6sa_
A:
1b
d3q6sb_
B:
1c
d3q6sc_
C:
1d
d3q6sd_
D:
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CATH Domains
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Pfam Domains
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