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3P4G
Asym. Unit
Info
Asym.Unit (407 KB)
Biol.Unit 1 (103 KB)
Biol.Unit 2 (106 KB)
Biol.Unit 3 (104 KB)
Biol.Unit 4 (106 KB)
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(1)
Title
:
X-RAY CRYSTAL STRUCTURE OF A HYPERACTIVE, CA2+-DEPENDENT, BETA-HELICAL ANTIFREEZE PROTEIN FROM AN ANTARCTIC BACTERIUM
Authors
:
C. P. Garnham, R. L. Campbell, P. L. Davies
Date
:
06 Oct 10 (Deposition) - 27 Apr 11 (Release) - 18 May 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Keywords
:
Right-Handed Ca2+-Binding Beta-Helix, Antifreeze Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. P. Garnham, R. L. Campbell, P. L. Davies
Anchored Clathrate Waters Bind Antifreeze Proteins To Ice.
Proc. Natl. Acad. Sci. Usa V. 108 7363 2011
[
close entry info
]
Hetero Components
(3, 58)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
2a: CALCIUM ION (CAa)
2aa: CALCIUM ION (CAaa)
2ab: CALCIUM ION (CAab)
2ac: CALCIUM ION (CAac)
2ad: CALCIUM ION (CAad)
2ae: CALCIUM ION (CAae)
2af: CALCIUM ION (CAaf)
2ag: CALCIUM ION (CAag)
2ah: CALCIUM ION (CAah)
2ai: CALCIUM ION (CAai)
2aj: CALCIUM ION (CAaj)
2ak: CALCIUM ION (CAak)
2al: CALCIUM ION (CAal)
2am: CALCIUM ION (CAam)
2an: CALCIUM ION (CAan)
2ao: CALCIUM ION (CAao)
2ap: CALCIUM ION (CAap)
2aq: CALCIUM ION (CAaq)
2ar: CALCIUM ION (CAar)
2as: CALCIUM ION (CAas)
2at: CALCIUM ION (CAat)
2au: CALCIUM ION (CAau)
2av: CALCIUM ION (CAav)
2aw: CALCIUM ION (CAaw)
2ax: CALCIUM ION (CAax)
2ay: CALCIUM ION (CAay)
2az: CALCIUM ION (CAaz)
2b: CALCIUM ION (CAb)
2c: CALCIUM ION (CAc)
2d: CALCIUM ION (CAd)
2e: CALCIUM ION (CAe)
2f: CALCIUM ION (CAf)
2g: CALCIUM ION (CAg)
2h: CALCIUM ION (CAh)
2i: CALCIUM ION (CAi)
2j: CALCIUM ION (CAj)
2k: CALCIUM ION (CAk)
2l: CALCIUM ION (CAl)
2m: CALCIUM ION (CAm)
2n: CALCIUM ION (CAn)
2o: CALCIUM ION (CAo)
2p: CALCIUM ION (CAp)
2q: CALCIUM ION (CAq)
2r: CALCIUM ION (CAr)
2s: CALCIUM ION (CAs)
2t: CALCIUM ION (CAt)
2u: CALCIUM ION (CAu)
2v: CALCIUM ION (CAv)
2w: CALCIUM ION (CAw)
2x: CALCIUM ION (CAx)
2y: CALCIUM ION (CAy)
2z: CALCIUM ION (CAz)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
3c: MAGNESIUM ION (MGc)
3d: MAGNESIUM ION (MGd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
2
Ligand/Ion
ACETATE ION
2
CA
52
Ligand/Ion
CALCIUM ION
3
MG
4
Ligand/Ion
MAGNESIUM ION
[
close Hetero Component info
]
Sites
(58, 58)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
45: EC9 (SOFTWARE)
46: FC1 (SOFTWARE)
47: FC2 (SOFTWARE)
48: FC3 (SOFTWARE)
49: FC4 (SOFTWARE)
50: FC5 (SOFTWARE)
51: FC6 (SOFTWARE)
52: FC7 (SOFTWARE)
53: FC8 (SOFTWARE)
54: FC9 (SOFTWARE)
55: GC1 (SOFTWARE)
56: GC2 (SOFTWARE)
57: GC3 (SOFTWARE)
58: GC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:34 , SER A:36 , ASN A:38 , VAL A:52 , ALA A:54 , ASP A:57
BINDING SITE FOR RESIDUE CA A 401
02
AC2
SOFTWARE
LEU A:53 , GLY A:55 , ASP A:57 , MET A:79 , THR A:81 , ASP A:84
BINDING SITE FOR RESIDUE CA A 402
03
AC3
SOFTWARE
GLY A:80 , GLY A:82 , ASP A:84 , ALA A:98 , THR A:100 , ASP A:103
BINDING SITE FOR RESIDUE CA A 403
04
AC4
SOFTWARE
GLY A:99 , GLY A:101 , ASP A:103 , ALA A:117 , THR A:119 , ASP A:122
BINDING SITE FOR RESIDUE CA A 404
05
AC5
SOFTWARE
GLY A:118 , GLY A:120 , ASP A:122 , ALA A:136 , THR A:138 , ASP A:141
BINDING SITE FOR RESIDUE CA A 405
06
AC6
SOFTWARE
GLY A:137 , THR A:138 , ASP A:139 , ASP A:141 , ALA A:155 , THR A:157 , ASP A:160
BINDING SITE FOR RESIDUE CA A 406
07
AC7
SOFTWARE
GLY A:156 , GLY A:158 , ASP A:160 , MET A:174 , THR A:176 , ASP A:179
BINDING SITE FOR RESIDUE CA A 407
08
AC8
SOFTWARE
GLY A:175 , ASP A:177 , ASP A:179 , LEU A:195 , THR A:197 , ASP A:200
BINDING SITE FOR RESIDUE CA A 408
09
AC9
SOFTWARE
ASP A:196 , GLY A:198 , ASP A:200 , GLY A:214 , THR A:216 , ASP A:219
BINDING SITE FOR RESIDUE CA A 409
10
BC1
SOFTWARE
GLY A:215 , GLY A:217 , ASP A:219 , GLY A:233 , THR A:235 , ASP A:238
BINDING SITE FOR RESIDUE CA A 410
11
BC2
SOFTWARE
GLY A:234 , GLY A:236 , ASP A:238 , LEU A:254 , THR A:256 , ASP A:259
BINDING SITE FOR RESIDUE CA A 411
12
BC3
SOFTWARE
GLY A:255 , GLY A:257 , ASP A:259 , GLY A:273 , GLU A:275 , ASP A:278
BINDING SITE FOR RESIDUE CA A 412
13
BC4
SOFTWARE
ASN A:274 , GLY A:276 , ASP A:278 , GLU A:304 , HOH A:1462 , HOH A:1615
BINDING SITE FOR RESIDUE CA A 413
14
BC5
SOFTWARE
ASP A:139 , HOH A:1657 , HOH A:1661 , GLU C:104 , HOH C:1655 , HOH C:1658
BINDING SITE FOR RESIDUE MG A 324
15
BC6
SOFTWARE
ASP A:148 , HOH A:1668 , HOH A:1669 , HOH A:1670 , HOH A:1671 , HOH A:1672
BINDING SITE FOR RESIDUE MG A 325
16
BC7
SOFTWARE
ASP A:167 , HOH A:1551 , HOH A:1572 , HOH A:1673 , HOH A:1674
BINDING SITE FOR RESIDUE MG A 326
17
BC8
SOFTWARE
ASP B:34 , SER B:36 , ASN B:38 , VAL B:52 , ALA B:54 , ASP B:57
BINDING SITE FOR RESIDUE CA B 401
18
BC9
SOFTWARE
LEU B:53 , GLY B:55 , ASP B:57 , MET B:79 , THR B:81 , ASP B:84
BINDING SITE FOR RESIDUE CA B 402
19
CC1
SOFTWARE
GLY B:80 , GLY B:82 , ASP B:84 , ALA B:98 , THR B:100 , ASP B:103
BINDING SITE FOR RESIDUE CA B 403
20
CC2
SOFTWARE
GLY B:99 , GLY B:101 , ASP B:103 , ALA B:117 , THR B:119 , ASP B:122
BINDING SITE FOR RESIDUE CA B 404
21
CC3
SOFTWARE
GLY B:118 , GLY B:120 , ASP B:122 , ALA B:136 , THR B:138 , ASP B:141
BINDING SITE FOR RESIDUE CA B 405
22
CC4
SOFTWARE
GLY B:137 , ASP B:139 , ASP B:141 , ALA B:155 , THR B:157 , ASP B:160
BINDING SITE FOR RESIDUE CA B 406
23
CC5
SOFTWARE
GLY B:156 , GLY B:158 , ASP B:160 , MET B:174 , THR B:176 , ASP B:179
BINDING SITE FOR RESIDUE CA B 407
24
CC6
SOFTWARE
GLY B:175 , ASP B:177 , ASP B:179 , LEU B:195 , THR B:197 , ASP B:200
BINDING SITE FOR RESIDUE CA B 408
25
CC7
SOFTWARE
ASP B:196 , GLY B:198 , ASP B:200 , GLY B:214 , THR B:216 , ASP B:219
BINDING SITE FOR RESIDUE CA B 409
26
CC8
SOFTWARE
GLY B:215 , GLY B:217 , ASP B:219 , GLY B:233 , THR B:235 , ASP B:238
BINDING SITE FOR RESIDUE CA B 410
27
CC9
SOFTWARE
GLY B:234 , GLY B:236 , ASP B:238 , LEU B:254 , THR B:256 , ASP B:259
BINDING SITE FOR RESIDUE CA B 411
28
DC1
SOFTWARE
GLY B:255 , GLY B:257 , ASP B:259 , GLY B:273 , GLU B:275 , ASP B:278
BINDING SITE FOR RESIDUE CA B 412
29
DC2
SOFTWARE
ASN B:274 , GLY B:276 , ASP B:278 , GLU B:304 , HOH B:390 , HOH B:1618
BINDING SITE FOR RESIDUE CA B 413
30
DC3
SOFTWARE
ASP B:148 , HOH B:1663 , HOH B:1664 , HOH B:1665 , HOH B:1666 , HOH B:1667
BINDING SITE FOR RESIDUE MG B 324
31
DC4
SOFTWARE
ILE A:239 , VAL A:260 , HOH A:1601 , ALA B:54 , GLY B:55 , THR B:81 , GLY B:82
BINDING SITE FOR RESIDUE ACT B 325
32
DC5
SOFTWARE
ASP C:34 , SER C:36 , ASN C:38 , VAL C:52 , ALA C:54 , ASP C:57
BINDING SITE FOR RESIDUE CA C 401
33
DC6
SOFTWARE
LEU C:53 , GLY C:55 , ASP C:57 , MET C:79 , THR C:81 , ASP C:84
BINDING SITE FOR RESIDUE CA C 402
34
DC7
SOFTWARE
GLY C:80 , GLY C:82 , ASP C:84 , ALA C:98 , THR C:100 , ASP C:103
BINDING SITE FOR RESIDUE CA C 403
35
DC8
SOFTWARE
GLY C:99 , GLY C:101 , ASP C:103 , ALA C:117 , THR C:119 , ASP C:122
BINDING SITE FOR RESIDUE CA C 404
36
DC9
SOFTWARE
GLY C:118 , GLY C:120 , ASP C:122 , ALA C:136 , GLY C:137 , THR C:138 , ASP C:141
BINDING SITE FOR RESIDUE CA C 405
37
EC1
SOFTWARE
GLY C:137 , ASP C:139 , ASP C:141 , ALA C:155 , THR C:157 , ASP C:160
BINDING SITE FOR RESIDUE CA C 406
38
EC2
SOFTWARE
GLY C:156 , GLY C:158 , ASP C:160 , MET C:174 , THR C:176 , ASP C:179
BINDING SITE FOR RESIDUE CA C 407
39
EC3
SOFTWARE
GLY C:175 , ASP C:177 , ASP C:179 , LEU C:195 , THR C:197 , ASP C:200
BINDING SITE FOR RESIDUE CA C 408
40
EC4
SOFTWARE
ASP C:196 , GLY C:198 , ASP C:200 , GLY C:214 , THR C:216 , ASP C:219
BINDING SITE FOR RESIDUE CA C 409
41
EC5
SOFTWARE
GLY C:215 , GLY C:217 , ASP C:219 , GLY C:233 , THR C:235 , ASP C:238
BINDING SITE FOR RESIDUE CA C 410
42
EC6
SOFTWARE
GLY C:234 , GLY C:236 , ASP C:238 , LEU C:254 , THR C:256 , ASP C:259
BINDING SITE FOR RESIDUE CA C 411
43
EC7
SOFTWARE
GLY C:255 , GLY C:257 , ASP C:259 , GLY C:273 , GLU C:275 , ASP C:278
BINDING SITE FOR RESIDUE CA C 412
44
EC8
SOFTWARE
ASN C:274 , GLY C:276 , ASP C:278 , GLU C:304 , HOH C:390 , HOH C:431
BINDING SITE FOR RESIDUE CA C 413
45
EC9
SOFTWARE
THR C:235 , GLY C:236 , THR C:256 , GLY C:257 , HOH C:1519 , SER D:36 , ASN D:37
BINDING SITE FOR RESIDUE ACT C 324
46
FC1
SOFTWARE
ASP D:34 , SER D:36 , ASN D:38 , VAL D:52 , ALA D:54 , ASP D:57
BINDING SITE FOR RESIDUE CA D 401
47
FC2
SOFTWARE
LEU D:53 , GLY D:55 , ASP D:57 , MET D:79 , THR D:81 , ASP D:84
BINDING SITE FOR RESIDUE CA D 402
48
FC3
SOFTWARE
GLY D:80 , GLY D:82 , ASP D:84 , ALA D:98 , THR D:100 , ASP D:103
BINDING SITE FOR RESIDUE CA D 403
49
FC4
SOFTWARE
GLY D:99 , GLY D:101 , ASP D:103 , ALA D:117 , THR D:119 , ASP D:122
BINDING SITE FOR RESIDUE CA D 404
50
FC5
SOFTWARE
GLY D:118 , GLY D:120 , ASP D:122 , ALA D:136 , THR D:138 , ASP D:141
BINDING SITE FOR RESIDUE CA D 405
51
FC6
SOFTWARE
GLY D:137 , THR D:138 , ASP D:139 , ASP D:141 , ALA D:155 , THR D:157 , ASP D:160
BINDING SITE FOR RESIDUE CA D 406
52
FC7
SOFTWARE
GLY D:156 , GLY D:158 , ASP D:160 , MET D:174 , THR D:176 , ASP D:179
BINDING SITE FOR RESIDUE CA D 407
53
FC8
SOFTWARE
GLY D:175 , ASP D:177 , ASP D:179 , LEU D:195 , THR D:197 , ASP D:200
BINDING SITE FOR RESIDUE CA D 408
54
FC9
SOFTWARE
ASP D:196 , GLY D:198 , ASP D:200 , GLY D:214 , THR D:216 , ASP D:219
BINDING SITE FOR RESIDUE CA D 409
55
GC1
SOFTWARE
GLY D:215 , GLY D:217 , ASP D:219 , GLY D:233 , THR D:235 , ASP D:238
BINDING SITE FOR RESIDUE CA D 410
56
GC2
SOFTWARE
GLY D:234 , GLY D:236 , ASP D:238 , LEU D:254 , THR D:256 , ASP D:259
BINDING SITE FOR RESIDUE CA D 411
57
GC3
SOFTWARE
GLY D:255 , GLY D:257 , ASP D:259 , GLY D:273 , GLU D:275 , ASP D:278
BINDING SITE FOR RESIDUE CA D 412
58
GC4
SOFTWARE
ASN D:274 , GLY D:276 , ASP D:278 , GLU D:304 , HOH D:702 , HOH D:1625
BINDING SITE FOR RESIDUE CA D 413
[
close Site info
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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Label:
Sorry, no Info available
[
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PROSITE Patterns/Profiles
(0, 0)
Info
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;
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Label:
End label:
Sorry, no Info available
[
close PROSITE info
]
Exons
(0, 0)
Info
All Exons
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Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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[
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CATH Domains
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all CATH domains
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Pfam Domains
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