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3P0L
Asym. Unit
Info
Asym.Unit (122 KB)
Biol.Unit 1 (33 KB)
Biol.Unit 2 (32 KB)
Biol.Unit 3 (32 KB)
Biol.Unit 4 (29 KB)
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(1)
Title
:
HUMAN STEROIDOGENIC ACUTE REGULATORY PROTEIN
Authors
:
L. Lehtio, M. Siponen, C. H. Arrowsmith, H. Berglund, R. D. Busam, R. Col L. G. Dahlgren, A. M. Edwards, S. Flodin, A. Flores, S. Graslund, M. Ham B. M. Hallberg, M. D. Herman, A. Johansson, I. Johansson, A. Kallas, T. T. Kotenyova, M. Moche, M. E. Nilsson, P. Nordlund, T. Nyman, C. Persso J. Sagemark, M. Sundstrom, L. Svensson, A. G. Thorsell, L. Tresaugues Den Berg, J. Weigelt, M. Welin, H. Schuler, Structural Genomics Co (Sgc)
Date
:
29 Sep 10 (Deposition) - 24 Nov 10 (Release) - 21 Sep 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.40
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Keywords
:
Structural Genomics Consortium, Sgc, Start Domain, Cholesterol Transport, Cholesterol, Mitochondria, Transport Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. G. Thorsell, W. H. Lee, C. Persson, M. I. Siponen, M. Nilsson, R. D. Busam, T. Kotenyova, H. Schuler, L. Lehtio
Comparative Structural Analysis Of Lipid Binding Start Domains.
Plos One V. 6 19521 2011
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
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Label:
Sorry, no Info available
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]
SAPs(SNPs)/Variants
(9, 35)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_034520 (R121W, chain A/B/C/D, )
2: VAR_014236 (E169G, chain A/B/C/D, )
3: VAR_014237 (E169K, chain A/B/C/D, )
4: VAR_005627 (R182L, chain A/B/C/D, )
5: VAR_005628 (A203D, chain A/B/C/D, )
6: VAR_014238 (R217T, chain A/B/C/D, )
7: VAR_014239 (A218V, chain A/B/C/D, )
8: VAR_014240 (M225T, chain A/B/C/D, )
9: VAR_014242 (L275P, chain A/B/C, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_034520
R
121
W
STAR_HUMAN
Polymorphism
34908868
A/B/C/D
R
121
W
2
UniProt
VAR_014236
E
169
G
STAR_HUMAN
Disease (AH1)
---
A/B/C/D
E
169
G
3
UniProt
VAR_014237
E
169
K
STAR_HUMAN
Disease (AH1)
---
A/B/C/D
E
169
K
4
UniProt
VAR_005627
R
182
L
STAR_HUMAN
Disease (AH1)
---
A/B/C/D
R
182
L
5
UniProt
VAR_005628
A
203
D
STAR_HUMAN
Polymorphism
1042854
A/B/C/D
A
203
D
6
UniProt
VAR_014238
R
217
T
STAR_HUMAN
Disease (AH1)
28938471
A/B/C/D
R
217
T
7
UniProt
VAR_014239
A
218
V
STAR_HUMAN
Disease (AH1)
---
A/B/C/D
A
218
V
8
UniProt
VAR_014240
M
225
T
STAR_HUMAN
Disease (AH1)
---
A/B/C/D
M
225
T
9
UniProt
VAR_014242
L
275
P
STAR_HUMAN
Disease (AH1)
---
A/B/C
L
275
P
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: START (A:67-276,B:67-276,C:67-276,D:67-27...)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
START
PS50848
START domain profile.
STAR_HUMAN
67-280
4
A:67-276
B:67-276
C:67-276
D:67-274
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Exons
(5, 20)
Info
All Exons
Exon 1.3d (A:64-102 | B:64-102 | C:64-102 (ga...)
Exon 1.4b (A:103-155 | B:103-155 | C:103-155 ...)
Exon 1.5b (A:156-217 (gaps) | B:156-217 (gaps...)
Exon 1.5e (A:217-248 | B:217-248 | C:217-248 ...)
Exon 1.5h (A:249-276 | B:249-276 | C:249-276 ...)
View:
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All Exon Boundaries
1: Boundary 1.3a/1.3d
2: Boundary 1.3d/1.4b
3: Boundary 1.4b/1.5b
4: Boundary 1.5b/1.5e
5: Boundary 1.5e/1.5h
6: Boundary 1.5h/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000276449
1a
ENSE00002137623
chr8:
38008783-38008273
511
STAR_HUMAN
1-22
22
0
-
-
1.3a
ENST00000276449
3a
ENSE00000980246
chr8:
38006272-38006159
114
STAR_HUMAN
22-60
39
0
-
-
1.3d
ENST00000276449
3d
ENSE00001325953
chr8:
38005845-38005718
128
STAR_HUMAN
60-102
43
4
A:64-102
B:64-102
C:64-102 (gaps)
D:64-101
39
39
39
38
1.4b
ENST00000276449
4b
ENSE00000980248
chr8:
38003965-38003807
159
STAR_HUMAN
103-155
53
4
A:103-155
B:103-155
C:103-155
D:107-155
53
53
53
49
1.5b
ENST00000276449
5b
ENSE00000980249
chr8:
38003665-38003481
185
STAR_HUMAN
156-217
62
4
A:156-217 (gaps)
B:156-217 (gaps)
C:156-217 (gaps)
D:156-217 (gaps)
62
62
62
62
1.5e
ENST00000276449
5e
ENSE00000980250
chr8:
38002833-38002740
94
STAR_HUMAN
217-248
32
4
A:217-248
B:217-248
C:217-248
D:217-248
32
32
32
32
1.5h
ENST00000276449
5h
ENSE00002130335
chr8:
38001904-38001167
738
STAR_HUMAN
249-285
37
4
A:249-276
B:249-276
C:249-276
D:262-274
28
28
28
13
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SCOP Domains
(0, 0)
Info
All SCOP Domains
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_START_3p0lD01 (D:76-274)
1b: PFAM_START_3p0lD02 (D:76-274)
1c: PFAM_START_3p0lD03 (D:76-274)
1d: PFAM_START_3p0lD04 (D:76-274)
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)
(
)
Clan
:
Bet_V_1_like
(93)
Family
:
START
(8)
Homo sapiens (Human)
(6)
1a
START-3p0lD01
D:76-274
1b
START-3p0lD02
D:76-274
1c
START-3p0lD03
D:76-274
1d
START-3p0lD04
D:76-274
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Asymmetric Unit 1
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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Asym.Unit (122 KB)
Header - Asym.Unit
Biol.Unit 1 (33 KB)
Header - Biol.Unit 1
Biol.Unit 2 (32 KB)
Header - Biol.Unit 2
Biol.Unit 3 (32 KB)
Header - Biol.Unit 3
Biol.Unit 4 (29 KB)
Header - Biol.Unit 4
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