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3OWN
Biol. Unit 3
Info
Asym.Unit (120 KB)
Biol.Unit 1 (59 KB)
Biol.Unit 2 (59 KB)
Biol.Unit 3 (171 KB)
Biol.Unit 4 (169 KB)
Biol.Unit 5 (335 KB)
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(1)
Title
:
POTENT MACROCYCLIC RENIN INHIBITORS
Authors
:
N. Borkakoti, D. Derbyshire
Date
:
20 Sep 10 (Deposition) - 15 Dec 10 (Release) - 12 Jan 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: A (3x)
Biol. Unit 4: B (3x)
Biol. Unit 5: A,B (3x)
Keywords
:
Renin, Protease, Aspartyl Protease, Hydrolase, Hydrolase-Hydrolase Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. Sund, O. Belda, D. Wiktelius, C. Sahlberg, L. Vrang, S. Sedig, E. Hamelink, I. Henderson, T. Agback, K. Jansson, N. Borkakoti, D. Derbyshire, A. Eneroth, B. Samuelsson
Design And Synthesis Of Potent Macrocyclic Renin Inhibitors
Bioorg. Med. Chem. Lett. V. 21 358 2011
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Hetero Components
(2, 12)
Info
All Hetero Components
1a: (2S,4S)-4-HYDROXY-2-(1-METHYLETHYL... (3OWa)
2a: (2S,4S)-4-HYDROXY-2-(1-METHYLETHYL... (3OXa)
3a: ACETATE ION (ACTa)
3b: ACETATE ION (ACTb)
3c: ACETATE ION (ACTc)
4a: SODIUM ION (NAa)
4b: SODIUM ION (NAb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
3OW
-1
Ligand/Ion
(2S,4S)-4-HYDROXY-2-(1-METHYLETHYL)-4-[(4S,13S)-18-[METHYL(METHYLSULFONYL)AMINO]-2,15-DIOXO-4-PHENYL-11-OXA-3,14-DIAZATRICYCLO[14.3.1.1~5,9~]HENICOSA-1(20),5(21),6,8,16,18-HEXAEN-13-YL]-N-(2-METHYLPROPYL)BUTANAMIDE
2
3OX
3
Ligand/Ion
(2S,4S)-4-HYDROXY-2-(1-METHYLETHYL)-4-[(4R,13S)-18-[METHYL(METHYLSULFONYL)AMINO]-2,15-DIOXO-4-PHENYL-11-OXA-3,14-DIAZATRICYCLO[14.3.1.1~5,9~]HENICOSA-1(20),5(21),6,8,16,18-HEXAEN-13-YL]-N-(2-METHYLPROPYL)BUTANAMIDE
3
ACT
9
Ligand/Ion
ACETATE ION
4
NA
-1
Ligand/Ion
SODIUM ION
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
THR A:15 , GLN A:16 , TYR A:17 , VAL A:33 , THR A:224 , ALA A:226
BINDING SITE FOR RESIDUE ACT A 800
2
AC2
SOFTWARE
LEU A:114 , LEU A:118 , PHE A:250 , NA A:802 , NA A:803 , ACT A:804
BINDING SITE FOR RESIDUE ACT A 801
3
AC3
SOFTWARE
ACT A:801
BINDING SITE FOR RESIDUE NA A 802
4
AC4
SOFTWARE
ACT A:801 , ACT A:804
BINDING SITE FOR RESIDUE NA A 803
5
AC5
SOFTWARE
TYR A:57 , HOH A:414 , ACT A:801 , NA A:803
BINDING SITE FOR RESIDUE ACT A 804
6
AC6
SOFTWARE
GLN A:16 , ASP A:35 , GLY A:37 , TYR A:80 , SER A:81 , THR A:82 , PRO A:115 , PHE A:116 , LEU A:118 , PHE A:121 , GLN A:132 , ASP A:223 , GLY A:225 , ALA A:226 , SER A:227 , TYR A:228 , SER A:230 , HIS A:298 , HOH A:410 , HOH A:413
BINDING SITE FOR RESIDUE 3OX A 500
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SAPs(SNPs)/Variants
(4, 12)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_035088 (D35N, chain A, )
2: VAR_029171 (Q91K, chain A, )
3: VAR_020376 (G148R, chain A, )
4: VAR_035087 (R161K, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_035088
D
104
N
RENI_HUMAN
Disease (RTD)
---
A
D
35
N
2
UniProt
VAR_029171
Q
160
K
RENI_HUMAN
Polymorphism
11571083
A
Q
91
K
3
UniProt
VAR_020376
G
217
R
RENI_HUMAN
Polymorphism
11571117
A
G
148
R
4
UniProt
VAR_035087
R
230
K
RENI_HUMAN
Disease (RTD)
---
A
R
161
K
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 9)
Info
All PROSITE Patterns/Profiles
1: PEPTIDASE_A1 (A:17-334)
2: ASP_PROTEASE (A:32-43,A:220-231)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PEPTIDASE_A1
PS51767
Peptidase family A1 domain profile.
RENI_HUMAN
86-403
3
A:17-334
-
2
ASP_PROTEASE
PS00141
Eukaryotic and viral aspartyl proteases active site.
RENI_HUMAN
101-112
289-300
6
A:32-43
-
A:220-231
-
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3owna_ (A:)
1b: SCOP_d3ownb_ (B:)
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Class
:
All beta proteins
(24004)
Fold
:
Acid proteases
(1120)
Superfamily
:
Acid proteases
(1120)
Family
:
Pepsin-like
(505)
Protein domain
:
Chymosin (synonym: renin)
(67)
Human (Homo sapiens) [TaxId: 9606]
(60)
1a
d3owna_
A:
1b
d3ownb_
B:
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_Asp_3ownB01 (B:16-336)
1b: PFAM_Asp_3ownB02 (B:16-336)
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Clan
:
Peptidase_AA
(368)
Family
:
Asp
(155)
Homo sapiens (Human)
(116)
1a
Asp-3ownB01
B:16-336
1b
Asp-3ownB02
B:16-336
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Asym.Unit (120 KB)
Header - Asym.Unit
Biol.Unit 1 (59 KB)
Header - Biol.Unit 1
Biol.Unit 2 (59 KB)
Header - Biol.Unit 2
Biol.Unit 3 (171 KB)
Header - Biol.Unit 3
Biol.Unit 4 (169 KB)
Header - Biol.Unit 4
Biol.Unit 5 (335 KB)
Header - Biol.Unit 5
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