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3OSV
Asym. Unit
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Asym.Unit (90 KB)
Biol.Unit 1 (43 KB)
Biol.Unit 2 (43 KB)
Biol.Unit 3 (43 KB)
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(1)
Title
:
THE CRYTSAL STRUCTURE OF FLGD FROM P. AERUGINOSA
Authors
:
D. Wang, M. Luo, S. Niu
Date
:
10 Sep 10 (Deposition) - 04 May 11 (Release) - 26 Mar 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.35
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C (2x)
Biol. Unit 3: D (2x)
Keywords
:
Flgd, Flagellum, P. Aeruginosa, Structural Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Zhou, M. Luo, X. Cai, J. Tang, S. Niu, W. Zhang, Y. Hu, Y. Yin, A. Huang, D. Wang, D. Wang
Crystal Structure Of A Novel Dimer Form Of Flgd From P. Aeruginosa Pao1
Proteins V. 79 2346 2011
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Hetero Components
(1, 10)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
1e: GLYCEROL (GOLe)
1f: GLYCEROL (GOLf)
1g: GLYCEROL (GOLg)
1h: GLYCEROL (GOLh)
1i: GLYCEROL (GOLi)
1j: GLYCEROL (GOLj)
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No.
Name
Count
Type
Full Name
1
GOL
10
Ligand/Ion
GLYCEROL
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Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:52 , ASN A:54 , ASN D:51 , ASP D:68 , ASP D:71
BINDING SITE FOR RESIDUE GOL A 138
02
AC2
SOFTWARE
ASN A:51 , ASP A:68 , HOH A:159 , ARG D:52 , ASN D:54
BINDING SITE FOR RESIDUE GOL A 139
03
AC3
SOFTWARE
VAL A:49 , VAL A:50 , ASP A:71 , SER A:72 , SER A:73 , TRP C:39 , ARG C:52
BINDING SITE FOR RESIDUE GOL A 140
04
AC4
SOFTWARE
ALA A:13 , THR A:14 , ASP A:15 , GLN A:98 , LYS A:131 , SER B:130
BINDING SITE FOR RESIDUE GOL A 141
05
AC5
SOFTWARE
ARG B:52 , ASN B:54 , ASN C:51 , ASP C:68 , ASP C:71 , HOH C:168
BINDING SITE FOR RESIDUE GOL B 138
06
AC6
SOFTWARE
ASN B:51 , ASP B:68 , LYS B:70 , ARG C:52 , ILE C:53 , ASN C:54
BINDING SITE FOR RESIDUE GOL B 139
07
AC7
SOFTWARE
VAL B:49 , VAL B:50 , ASP B:71 , SER B:72 , SER B:73 , TRP D:39 , ARG D:52
BINDING SITE FOR RESIDUE GOL B 140
08
AC8
SOFTWARE
ARG A:52 , VAL C:49 , VAL C:50 , ASP C:71 , SER C:72 , SER C:73 , HOH C:154
BINDING SITE FOR RESIDUE GOL C 138
09
AC9
SOFTWARE
TRP B:39 , ARG B:52 , VAL D:49 , VAL D:50 , ASP D:71 , SER D:72 , SER D:73 , HOH D:161
BINDING SITE FOR RESIDUE GOL D 138
10
BC1
SOFTWARE
THR B:48 , GLU D:85 , ALA D:86 , GLN D:87 , GLY D:96 , LEU D:97 , HOH D:175 , HOH D:183
BINDING SITE FOR RESIDUE GOL D 139
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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;
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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all CATH domains
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Pfam Domains
(2, 8)
Info
all PFAM domains
1a: PFAM_FlgD_ig_3osvD01 (D:13-92)
1b: PFAM_FlgD_ig_3osvD02 (D:13-92)
1c: PFAM_FlgD_ig_3osvD03 (D:13-92)
1d: PFAM_FlgD_ig_3osvD04 (D:13-92)
2a: PFAM_FLgD_tudor_3osvD05 (D:3-135)
2b: PFAM_FLgD_tudor_3osvD06 (D:3-135)
2c: PFAM_FLgD_tudor_3osvD07 (D:3-135)
2d: PFAM_FLgD_tudor_3osvD08 (D:3-135)
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Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
E-set
(290)
Family
:
FlgD_ig
(1)
Pseudomonas aeruginosa
(1)
1a
FlgD_ig-3osvD01
D:13-92
1b
FlgD_ig-3osvD02
D:13-92
1c
FlgD_ig-3osvD03
D:13-92
1d
FlgD_ig-3osvD04
D:13-92
Clan
:
no clan defined [family: FLgD_tudor]
(1)
Family
:
FLgD_tudor
(1)
Pseudomonas aeruginosa
(1)
2a
FLgD_tudor-3osvD05
D:3-135
2b
FLgD_tudor-3osvD06
D:3-135
2c
FLgD_tudor-3osvD07
D:3-135
2d
FLgD_tudor-3osvD08
D:3-135
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Asym.Unit (90 KB)
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