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3OP4
Biol. Unit 1
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Asym.Unit (148 KB)
Biol.Unit 1 (277 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF PUTATIVE 3-KETOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE FROM VIBRIO CHOLERAE O1 BIOVAR ELTOR STR. N16961 IN COMPLEX WITH NADP+
Authors
:
J. Hou, M. Chruszcz, O. Onopriyenko, S. Grimshaw, P. Porebski, H. Zheng A. Savchenko, W. Anderson, W. Minor, Center For Structural Genomi Infectious Diseases (Csgid)
Date
:
31 Aug 10 (Deposition) - 22 Sep 10 (Release) - 23 Mar 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.60
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (2x)
Keywords
:
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase, Structural Genomics, Center For Structural Genomics Of Infectious Diseases, Csgid, Rossmann Fold, Bacterial Cell, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Hou, H. Zheng, M. Chruszcz, M. D. Zimmerman, I. A. Shumilin, T. Osinski, M. Demas, S. Grimshaw, W. Minor
Dissecting The Structural Elements For The Activation Of Beta-Ketoacyl-(Acyl Carrier Protein) Reductase From Vibrio Cholerae.
J. Bacteriol. V. 198 463 2015
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Hetero Components
(3, 56)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
2a: SELENOMETHIONINE (MSEa)
2b: SELENOMETHIONINE (MSEb)
2c: SELENOMETHIONINE (MSEc)
2d: SELENOMETHIONINE (MSEd)
2e: SELENOMETHIONINE (MSEe)
2f: SELENOMETHIONINE (MSEf)
2g: SELENOMETHIONINE (MSEg)
2h: SELENOMETHIONINE (MSEh)
2i: SELENOMETHIONINE (MSEi)
2j: SELENOMETHIONINE (MSEj)
2k: SELENOMETHIONINE (MSEk)
2l: SELENOMETHIONINE (MSEl)
2m: SELENOMETHIONINE (MSEm)
2n: SELENOMETHIONINE (MSEn)
2o: SELENOMETHIONINE (MSEo)
2p: SELENOMETHIONINE (MSEp)
2q: SELENOMETHIONINE (MSEq)
2r: SELENOMETHIONINE (MSEr)
2s: SELENOMETHIONINE (MSEs)
2t: SELENOMETHIONINE (MSEt)
2u: SELENOMETHIONINE (MSEu)
2v: SELENOMETHIONINE (MSEv)
2w: SELENOMETHIONINE (MSEw)
2x: SELENOMETHIONINE (MSEx)
3a: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPa)
3b: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPb)
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No.
Name
Count
Type
Full Name
1
ACT
4
Ligand/Ion
ACETATE ION
2
MSE
48
Mod. Amino Acid
SELENOMETHIONINE
3
NAP
4
Ligand/Ion
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY A:16 , SER A:18 , ARG A:19 , GLY A:20 , ILE A:21 , THR A:41 , LEU A:62 , ASN A:63 , VAL A:64 , ASN A:90 , ALA A:91 , GLY A:92 , ILE A:93 , VAL A:140 , GLY A:141 , SER A:142 , TYR A:155 , LYS A:159 , PRO A:185 , GLY A:186 , PHE A:187 , ILE A:188 , THR A:190 , MSE A:192 , THR A:193 , ACT A:250 , HOH A:262 , HOH A:275 , HOH A:281 , HOH A:282 , HOH A:298 , HOH A:322 , HOH A:331 , HOH A:407 , HOH A:408 , HOH A:432 , HOH A:494
BINDING SITE FOR RESIDUE NAP A 249
2
AC2
SOFTWARE
SER A:142 , TYR A:155 , PHE A:187 , NAP A:249 , HOH A:567 , HOH A:595
BINDING SITE FOR RESIDUE ACT A 250
3
AC3
SOFTWARE
GLY B:16 , SER B:18 , ARG B:19 , ILE B:21 , THR B:41 , LEU B:62 , ASN B:63 , VAL B:64 , ASN B:90 , ALA B:91 , VAL B:140 , GLY B:141 , TYR B:155 , LYS B:159 , PRO B:185 , GLY B:186 , ILE B:188 , THR B:190 , MSE B:192 , ACT B:250 , HOH B:282 , HOH B:285 , HOH B:294 , HOH B:305 , HOH B:333 , HOH B:336 , HOH B:366 , HOH B:419 , HOH B:431 , HOH B:459 , HOH B:588
BINDING SITE FOR RESIDUE NAP B 249
4
AC4
SOFTWARE
SER B:142 , TYR B:155 , PHE B:187 , NAP B:249 , HOH B:320 , HOH B:608
BINDING SITE FOR RESIDUE ACT B 250
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3op4a_ (A:)
1b: SCOP_d3op4b_ (B:)
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Protein Domains
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Organisms
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
NAD(P)-binding Rossmann-fold domains
(1604)
Superfamily
:
NAD(P)-binding Rossmann-fold domains
(1604)
Family
:
Tyrosine-dependent oxidoreductases
(503)
Protein domain
:
automated matches
(114)
Vibrio cholerae [TaxId: 243277]
(7)
1a
d3op4a_
A:
1b
d3op4b_
B:
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CATH Domains
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Pfam Domains
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