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3O6W
Asym. Unit
Info
Asym.Unit (319 KB)
Biol.Unit 1 (158 KB)
Biol.Unit 2 (160 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF MONOMERIC KLHXK1 IN CRYSTAL FORM VIII (OPEN STATE)
Authors
:
E. B. Kuettner, K. Kettner, A. Keim, T. M. Kriegel, N. Strater
Date
:
29 Jul 10 (Deposition) - 13 Oct 10 (Release) - 29 Dec 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.48
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Rnaseh-Like Fold, Hexokinase, Glycolysis, Glucose Repression, Atp Binding, Mig1 Binding, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
E. B. Kuettner, K. Kettner, A. Keim, D. I. Svergun, D. Volke, D. Singer, R. Hoffmann, E. C. Muller, A. Otto, T. M. Kriegel, N. Strater
Crystal Structure Of Hexokinase Klhxk1 Of Kluyveromyces Lactis: A Molecular Basis For Understanding The Control Of Yeast Hexokinase Functions Via Covalent Modification And Oligomerization.
J. Biol. Chem. V. 285 41019 2010
(for further references see the
PDB file header
)
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Hetero Components
(2, 8)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
1e: GLYCEROL (GOLe)
2a: PHOSPHATE ION (PO4a)
2b: PHOSPHATE ION (PO4b)
2c: PHOSPHATE ION (PO4c)
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No.
Name
Count
Type
Full Name
1
GOL
5
Ligand/Ion
GLYCEROL
2
PO4
3
Ligand/Ion
PHOSPHATE ION
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASN A:209 , ASP A:210 , THR A:211 , GLY A:234 , VAL A:235 , ASN A:236 , HOH A:579
BINDING SITE FOR RESIDUE GOL A 486
2
AC2
SOFTWARE
PHE A:156 , TYR A:158 , ALA A:160 , GLN A:162 , HOH A:537 , HOH A:575 , HOH A:630 , HOH A:684 , HOH A:828
BINDING SITE FOR RESIDUE GOL A 487
3
AC3
SOFTWARE
GLY A:232 , THR A:233 , GLY A:417 , SER A:418
BINDING SITE FOR RESIDUE PO4 A 488
4
AC4
SOFTWARE
ASN B:209 , ASP B:210 , THR B:211 , GLY B:234 , VAL B:235 , ASN B:236
BINDING SITE FOR RESIDUE GOL B 486
5
AC5
SOFTWARE
THR A:372 , THR A:373 , VAL A:374 , ARG A:377
BINDING SITE FOR RESIDUE GOL B 487
6
AC6
SOFTWARE
HIS B:185 , ASP B:186 , HOH B:551
BINDING SITE FOR RESIDUE GOL B 488
7
AC7
SOFTWARE
THR B:233 , GLY B:417 , SER B:418
BINDING SITE FOR RESIDUE PO4 B 489
8
AC8
SOFTWARE
SER B:37 , SER B:38 , GLU B:39 , HOH B:702 , HOH B:772
BINDING SITE FOR RESIDUE PO4 B 490
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: HEXOKINASE_2 (A:21-468,B:21-468)
2: HEXOKINASE_1 (A:152-177,B:152-177)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
HEXOKINASE_2
PS51748
Hexokinase domain profile.
HXK_KLULA
21-468
2
A:21-468
B:21-468
2
HEXOKINASE_1
PS00378
Hexokinase domain signature.
HXK_KLULA
152-177
2
A:152-177
B:152-177
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d3o6wa1 (A:19-223)
1b: SCOP_d3o6wa2 (A:224-485)
1c: SCOP_d3o6wb1 (B:20-223)
1d: SCOP_d3o6wb2 (B:224-485)
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Protein Domains
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Ribonuclease H-like motif
(1424)
Superfamily
:
Actin-like ATPase domain
(426)
Family
:
automated matches
(111)
Protein domain
:
automated matches
(111)
Milk yeast (Kluyveromyces lactis) [TaxId: 28985]
(8)
1a
d3o6wa1
A:19-223
1b
d3o6wa2
A:224-485
1c
d3o6wb1
B:20-223
1d
d3o6wb2
B:224-485
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
(2, 4)
Info
all PFAM domains
1a: PFAM_Hexokinase_1_3o6wB01 (B:21-222)
1b: PFAM_Hexokinase_1_3o6wB02 (B:21-222)
2a: PFAM_Hexokinase_2_3o6wB03 (B:224-472)
2b: PFAM_Hexokinase_2_3o6wB04 (B:224-472)
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)
Clan
:
Actin_ATPase
(173)
Family
:
Hexokinase_1
(12)
Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (Yea
(8)
1a
Hexokinase_1-3o6wB01
B:21-222
1b
Hexokinase_1-3o6wB02
B:21-222
Family
:
Hexokinase_2
(12)
Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (Yea
(8)
2a
Hexokinase_2-3o6wB03
B:224-472
2b
Hexokinase_2-3o6wB04
B:224-472
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (319 KB)
Header - Asym.Unit
Biol.Unit 1 (158 KB)
Header - Biol.Unit 1
Biol.Unit 2 (160 KB)
Header - Biol.Unit 2
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