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3NEY
Biol. Unit 1
Info
Asym.Unit (182 KB)
Biol.Unit 1 (32 KB)
Biol.Unit 2 (33 KB)
Biol.Unit 3 (33 KB)
Biol.Unit 4 (33 KB)
Biol.Unit 5 (32 KB)
Biol.Unit 6 (32 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE KINASE DOMAIN OF MPP1/P55
Authors
:
Y. Shen, Y. Tong, N. Zhong, X. Guan, W. Tempel, F. Mackenzie, C. H. Arrows A. M. Edwards, C. Bountra, J. Weigelt, A. Bochkarev, H. Park, Structur Genomics Consortium (Sgc)
Date
:
09 Jun 10 (Deposition) - 04 Aug 10 (Release) - 12 Nov 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.26
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Biol. Unit 5: F (1x)
Biol. Unit 6: E (1x)
Keywords
:
Structural Genomics Consortium, Sgc, 55 Kda Erythrocyte Membrane Protein, Membrane Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. Shen, Y. Tong, N. Zhong, X. Guan, W. Tempel, F. Mackenzie, C. H. Arrowsmith, A. M. Edwards, C. Bountra, J. Weigelt, A. Bochkarev, H. Park
Crystal Structure Of The Kinase Domain Of Mpp1/P55
To Be Published
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Hetero Components
(2, 9)
Info
All Hetero Components
1a: SULFATE ION (SO4a)
1b: SULFATE ION (SO4b)
1c: SULFATE ION (SO4c)
1d: SULFATE ION (SO4d)
1e: SULFATE ION (SO4e)
1f: SULFATE ION (SO4f)
1g: SULFATE ION (SO4g)
1h: SULFATE ION (SO4h)
1i: SULFATE ION (SO4i)
1j: SULFATE ION (SO4j)
1k: SULFATE ION (SO4k)
1l: SULFATE ION (SO4l)
2a: UNKNOWN ATOM OR ION (UNXa)
2aa: UNKNOWN ATOM OR ION (UNXaa)
2ab: UNKNOWN ATOM OR ION (UNXab)
2ac: UNKNOWN ATOM OR ION (UNXac)
2ad: UNKNOWN ATOM OR ION (UNXad)
2ae: UNKNOWN ATOM OR ION (UNXae)
2b: UNKNOWN ATOM OR ION (UNXb)
2c: UNKNOWN ATOM OR ION (UNXc)
2d: UNKNOWN ATOM OR ION (UNXd)
2e: UNKNOWN ATOM OR ION (UNXe)
2f: UNKNOWN ATOM OR ION (UNXf)
2g: UNKNOWN ATOM OR ION (UNXg)
2h: UNKNOWN ATOM OR ION (UNXh)
2i: UNKNOWN ATOM OR ION (UNXi)
2j: UNKNOWN ATOM OR ION (UNXj)
2k: UNKNOWN ATOM OR ION (UNXk)
2l: UNKNOWN ATOM OR ION (UNXl)
2m: UNKNOWN ATOM OR ION (UNXm)
2n: UNKNOWN ATOM OR ION (UNXn)
2o: UNKNOWN ATOM OR ION (UNXo)
2p: UNKNOWN ATOM OR ION (UNXp)
2q: UNKNOWN ATOM OR ION (UNXq)
2r: UNKNOWN ATOM OR ION (UNXr)
2s: UNKNOWN ATOM OR ION (UNXs)
2t: UNKNOWN ATOM OR ION (UNXt)
2u: UNKNOWN ATOM OR ION (UNXu)
2v: UNKNOWN ATOM OR ION (UNXv)
2w: UNKNOWN ATOM OR ION (UNXw)
2x: UNKNOWN ATOM OR ION (UNXx)
2y: UNKNOWN ATOM OR ION (UNXy)
2z: UNKNOWN ATOM OR ION (UNXz)
View:
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Label:
No.
Name
Count
Type
Full Name
1
SO4
2
Ligand/Ion
SULFATE ION
2
UNX
7
Ligand/Ion
UNKNOWN ATOM OR ION
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH A:48 , HOH A:175 , ALA A:290 , SER A:291 , GLY A:292 , VAL A:293 , GLY A:294 , ARG A:295 , SER A:296
BINDING SITE FOR RESIDUE SO4 A 3
2
AC2
SOFTWARE
ARG A:389 , HIS A:428
BINDING SITE FOR RESIDUE SO4 A 4
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_011914 (E448Q, chain A, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_011914
E
448
Q
EM55_HUMAN
Polymorphism
14092
A
E
448
Q
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: GUANYLATE_KINASE_2 (A:282-451)
2: GUANYLATE_KINASE_1 (A:317-334)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GUANYLATE_KINASE_2
PS50052
Guanylate kinase-like domain profile.
EM55_HUMAN
282-451
1
A:282-451
-
-
-
-
-
2
GUANYLATE_KINASE_1
PS00856
Guanylate kinase-like signature.
EM55_HUMAN
317-334
1
A:317-334
-
-
-
-
-
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 6)
Info
All SCOP Domains
1a: SCOP_d3neya_ (A:)
1b: SCOP_d3neyd_ (D:)
1c: SCOP_d3neye_ (E:)
1d: SCOP_d3neyf_ (F:)
1e: SCOP_d3neyb_ (B:)
1f: SCOP_d3neyc_ (C:)
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Protein Domains
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(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
automated matches
(303)
Protein domain
:
automated matches
(303)
Human (Homo sapiens) [TaxId: 9606]
(86)
1a
d3neya_
A:
1b
d3neyd_
D:
1c
d3neye_
E:
1d
d3neyf_
F:
1e
d3neyb_
B:
1f
d3neyc_
C:
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(1, 6)
Info
all PFAM domains
1a: PFAM_Guanylate_kin_3neyF01 (F:282-453)
1b: PFAM_Guanylate_kin_3neyF02 (F:282-453)
1c: PFAM_Guanylate_kin_3neyF03 (F:282-453)
1d: PFAM_Guanylate_kin_3neyF04 (F:282-453)
1e: PFAM_Guanylate_kin_3neyF05 (F:282-453)
1f: PFAM_Guanylate_kin_3neyF06 (F:282-453)
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Clan
:
P-loop_NTPase
(1112)
Family
:
Guanylate_kin
(23)
Homo sapiens (Human)
(4)
1a
Guanylate_kin-3neyF01
F:282-453
1b
Guanylate_kin-3neyF02
F:282-453
1c
Guanylate_kin-3neyF03
F:282-453
1d
Guanylate_kin-3neyF04
F:282-453
1e
Guanylate_kin-3neyF05
F:282-453
1f
Guanylate_kin-3neyF06
F:282-453
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Asymmetric Unit 1
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Asym.Unit (182 KB)
Header - Asym.Unit
Biol.Unit 1 (32 KB)
Header - Biol.Unit 1
Biol.Unit 2 (33 KB)
Header - Biol.Unit 2
Biol.Unit 3 (33 KB)
Header - Biol.Unit 3
Biol.Unit 4 (33 KB)
Header - Biol.Unit 4
Biol.Unit 5 (32 KB)
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Biol.Unit 6 (32 KB)
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