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3MPR
Biol. Unit 2
Info
Asym.Unit (417 KB)
Biol.Unit 1 (207 KB)
Biol.Unit 2 (207 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN FROM BACTEROIDES THETAIOTAOMICRON, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET BTR318A
Authors
:
A. Kuzin, M. Su, J. Seetharaman, M. Mao, R. Xiao, C. Ciccosanti, D. Lee, J. K. Everett, R. Nair, T. B. Acton, B. Rost, G. T. Montelione, J. F. Hunt Northeast Structural Genomics Consortium (Nesg)
Date
:
27 Apr 10 (Deposition) - 26 May 10 (Release) - 26 May 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Structural Genomics, Psi-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Kuzin, M. Su, J. Seetharaman, M. Mao, R. Xiao, C. Ciccosanti, D. Lee, J. K. Everett, R. Nair, T. B. Acton, B. Rost, G. T. Montelione, J. F. Hunt, L. Tong, Northeast Structural Genomics Consortium (Nesg)
Northeast Structural Genomics Consortium Target Btr318A
To Be Published
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Hetero Components
(3, 13)
Info
All Hetero Components
1a: ACETIC ACID (ACYa)
1b: ACETIC ACID (ACYb)
1c: ACETIC ACID (ACYc)
1d: ACETIC ACID (ACYd)
1e: ACETIC ACID (ACYe)
1f: ACETIC ACID (ACYf)
2a: BROMIDE ION (BRa)
2b: BROMIDE ION (BRb)
2c: BROMIDE ION (BRc)
2d: BROMIDE ION (BRd)
2e: BROMIDE ION (BRe)
2f: BROMIDE ION (BRf)
2g: BROMIDE ION (BRg)
2h: BROMIDE ION (BRh)
2i: BROMIDE ION (BRi)
2j: BROMIDE ION (BRj)
2k: BROMIDE ION (BRk)
2l: BROMIDE ION (BRl)
2m: BROMIDE ION (BRm)
2n: BROMIDE ION (BRn)
3a: SELENOMETHIONINE (MSEa)
3b: SELENOMETHIONINE (MSEb)
3c: SELENOMETHIONINE (MSEc)
3d: SELENOMETHIONINE (MSEd)
3e: SELENOMETHIONINE (MSEe)
3f: SELENOMETHIONINE (MSEf)
3g: SELENOMETHIONINE (MSEg)
3h: SELENOMETHIONINE (MSEh)
3i: SELENOMETHIONINE (MSEi)
3j: SELENOMETHIONINE (MSEj)
3k: SELENOMETHIONINE (MSEk)
3l: SELENOMETHIONINE (MSEl)
3m: SELENOMETHIONINE (MSEm)
3n: SELENOMETHIONINE (MSEn)
3o: SELENOMETHIONINE (MSEo)
3p: SELENOMETHIONINE (MSEp)
4a: DI(HYDROXYETHYL)ETHER (PEGa)
4b: DI(HYDROXYETHYL)ETHER (PEGb)
5a: UNKNOWN LIGAND (UNLa)
5b: UNKNOWN LIGAND (UNLb)
5c: UNKNOWN LIGAND (UNLc)
5d: UNKNOWN LIGAND (UNLd)
5e: UNKNOWN LIGAND (UNLe)
5f: UNKNOWN LIGAND (UNLf)
5g: UNKNOWN LIGAND (UNLg)
5h: UNKNOWN LIGAND (UNLh)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ACY
3
Ligand/Ion
ACETIC ACID
2
BR
-1
Ligand/Ion
BROMIDE ION
3
MSE
8
Mod. Amino Acid
SELENOMETHIONINE
4
PEG
2
Ligand/Ion
DI(HYDROXYETHYL)ETHER
5
UNL
-1
Ligand/Ion
UNKNOWN LIGAND
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Sites
(11, 11)
Info
All Sites
01: BC2 (SOFTWARE)
02: BC3 (SOFTWARE)
03: BC4 (SOFTWARE)
04: BC5 (SOFTWARE)
05: BC6 (SOFTWARE)
06: BC7 (SOFTWARE)
07: BC8 (SOFTWARE)
08: BC9 (SOFTWARE)
09: CC1 (SOFTWARE)
10: CC2 (SOFTWARE)
11: CC3 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
BC2
SOFTWARE
ARG C:249 , VAL C:251 , HOH C:1014
BINDING SITE FOR RESIDUE ACY C 1310
02
BC3
SOFTWARE
LYS C:148 , ARG C:151 , SER C:187
BINDING SITE FOR RESIDUE BR C 299
03
BC4
SOFTWARE
ARG C:74 , ILE C:121
BINDING SITE FOR RESIDUE BR C 300
04
BC5
SOFTWARE
ASP C:199 , LYS C:203 , HOH C:390 , HOH C:434
BINDING SITE FOR RESIDUE BR C 301
05
BC6
SOFTWARE
PRO A:234 , SER A:235 , HIS A:237 , ASP A:290 , HIS A:294 , HIS A:296 , ASP C:205 , HIS C:237 , LYS C:239 , HOH C:334 , HOH C:374
BINDING SITE FOR RESIDUE PEG C 306
06
BC7
SOFTWARE
ARG D:249
BINDING SITE FOR RESIDUE ACY D 1310
07
BC8
SOFTWARE
ASP A:205 , HIS A:237 , LYS A:239 , SER C:235 , HIS C:237 , PHE C:289 , ASP C:290 , HIS C:293 , HIS C:294 , HIS C:296 , HOH C:725
BINDING SITE FOR RESIDUE PEG C 307
08
BC9
SOFTWARE
PHE D:214 , THR D:223 , HOH D:323
BINDING SITE FOR RESIDUE ACY D 1311
09
CC1
SOFTWARE
GLN D:40 , PRO D:65 , GLY D:66 , HOH D:685
BINDING SITE FOR RESIDUE BR D 299
10
CC2
SOFTWARE
HIS D:55
BINDING SITE FOR RESIDUE BR D 300
11
CC3
SOFTWARE
LYS D:148 , SER D:187
BINDING SITE FOR RESIDUE BR D 301
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(, 0)
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(0, 0)
Info
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_Exo_endo_phos_3mprD01 (D:10-280)
1b: PFAM_Exo_endo_phos_3mprD02 (D:10-280)
1c: PFAM_Exo_endo_phos_3mprD03 (D:10-280)
1d: PFAM_Exo_endo_phos_3mprD04 (D:10-280)
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Clans
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Organisms
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Clan
:
no clan defined [family: Exo_endo_phos]
(21)
Family
:
Exo_endo_phos
(21)
Bacteroides thetaiotaomicron
(1)
1a
Exo_endo_phos-3mprD01
D:10-280
1b
Exo_endo_phos-3mprD02
D:10-280
1c
Exo_endo_phos-3mprD03
D:10-280
1d
Exo_endo_phos-3mprD04
D:10-280
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (417 KB)
Header - Asym.Unit
Biol.Unit 1 (207 KB)
Header - Biol.Unit 1
Biol.Unit 2 (207 KB)
Header - Biol.Unit 2
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