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Asym. Unit
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Asym.Unit (142 KB)
Biol.Unit 1 (71 KB)
Biol.Unit 2 (70 KB)
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(1)
Title
:
THE C-DI-GMP RESPONSIVE GLOBAL REGULATOR CLP LINKS CELL-CELL SIGNALING TO VIRULENCE GENE EXPRESSION IN XANTHOMONAS CAMPESTRIS
Authors
:
K. H. Chin, Z. L. Tu, Y. H. Tseng, J. M. Dow, A. H. J. Wang, S. H. Chou
Date
:
03 Sep 09 (Deposition) - 15 Dec 09 (Release) - 09 Dec 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,D (1x)
Biol. Unit 2: B,C (1x)
Keywords
:
Xcc, Pathogenicity, Crp, Clp, C-Di-Gmp Receptor, Quorum Sensing, Dna- Binding, Transcription, Transcription Regulation
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. H. Chin, Y. C. Lee, Z. L. Tu, C. H. Chen, Y. H. Tseng, J. M. Yang, R. P. Ryan, Y. Mccarthy, J. M. Dow, A. H. Wang, S. H. Chou
The Camp Receptor-Like Protein Clp Is A Novel C-Di-Gmp Receptor Linking Cell-Cell Signaling To Virulence Gene Expression In Xanthomonas Campestris.
J. Mol. Biol. V. 396 646 2010
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Hetero Components
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Sites
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PROSITE Patterns/Profiles
(3, 11)
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1: CNMP_BINDING_3 (A:22-122,B:22-122,D:22-122)
2: HTH_CRP_2 (A:158-228,B:158-228,C:158-229,D:15...)
3: HTH_CRP_1 (A:188-211,B:188-211,C:188-211,D:18...)
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CNMP_BINDING_3
PS50042
cAMP/cGMP binding motif profile.
CLP_XANCP
22-122
3
A:22-122
B:22-122
D:22-122
2
HTH_CRP_2
PS51063
Crp-type HTH domain profile.
CLP_XANCP
158-230
4
A:158-228
B:158-228
C:158-229
D:158-229
3
HTH_CRP_1
PS00042
Crp-type HTH domain signature.
CLP_XANCP
188-211
4
A:188-211
B:188-211
C:188-211
D:188-211
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SCOP Domains
(2, 8)
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1a: SCOP_d3iwza2 (A:159-228)
1b: SCOP_d3iwzb2 (B:159-228)
1c: SCOP_d3iwzc2 (C:159-229)
1d: SCOP_d3iwzd2 (D:159-229)
2a: SCOP_d3iwza1 (A:22-158)
2b: SCOP_d3iwzb1 (B:22-158)
2c: SCOP_d3iwzc1 (C:23-158)
2d: SCOP_d3iwzd1 (D:22-158)
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All alpha proteins
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DNA/RNA-binding 3-helical bundle
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Winged helix DNA-binding domain
(576)
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automated matches
(118)
Protein domain
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automated matches
(118)
Xanthomonas campestris [TaxId: 340]
(1)
1a
d3iwza2
A:159-228
1b
d3iwzb2
B:159-228
1c
d3iwzc2
C:159-229
1d
d3iwzd2
D:159-229
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All beta proteins
(24004)
Fold
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Double-stranded beta-helix
(580)
Superfamily
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cAMP-binding domain-like
(99)
Family
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automated matches
(17)
Protein domain
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automated matches
(17)
Xanthomonas campestris [TaxId: 340]
(1)
2a
d3iwza1
A:22-158
2b
d3iwzb1
B:22-158
2c
d3iwzc1
C:23-158
2d
d3iwzd1
D:22-158
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Asym.Unit (142 KB)
Header - Asym.Unit
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