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3HQV
Asym. Unit
Info
Asym.Unit (73 KB)
Biol.Unit 1 (561 KB)
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(1)
Title
:
LOW RESOLUTION, MOLECULAR ENVELOPE STRUCTURE OF TYPE I COLLAGEN IN SITU DETERMINED BY FIBER DIFFRACTION. SINGLE TYPE I COLLAGEN MOLECULE, RIGID BODY REFINEMENT
Authors
:
J. P. Orgel
Date
:
08 Jun 09 (Deposition) - 14 Jul 09 (Release) - 14 Jul 09 (Revision)
Method
:
FIBER DIFFRACTION
Resolution
:
5.16
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B,C (9x)
Keywords
:
Native, In Situ, Molecular Envelope, Triple-Helical, Supermolecular, Supramolecular, Packing Structure, Structural Protein/Contractile Protein Complex, Collagen, Extracellular Matrix, Glycoprotein, Hydroxylation, Pyrrolidone Carboxylic Acid, Secreted, Structural Protein, Contractile Protein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
J. P. Orgel, T. C. Irving, A. Miller, T. J. Wess
Microfibrillar Structure Of Type I Collagen In Situ
Proc. Natl. Acad. Sci. Usa V. 103 9001 2006
(for further references see the
PDB file header
)
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close entry info
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Hetero Components
(2, 312)
Info
All Hetero Components
1a: 4-HYDROXYPROLINE (HYPa)
1aa: 4-HYDROXYPROLINE (HYPaa)
1ab: 4-HYDROXYPROLINE (HYPab)
1ac: 4-HYDROXYPROLINE (HYPac)
1ad: 4-HYDROXYPROLINE (HYPad)
1ae: 4-HYDROXYPROLINE (HYPae)
1af: 4-HYDROXYPROLINE (HYPaf)
1ag: 4-HYDROXYPROLINE (HYPag)
1ah: 4-HYDROXYPROLINE (HYPah)
1ai: 4-HYDROXYPROLINE (HYPai)
1aj: 4-HYDROXYPROLINE (HYPaj)
1ak: 4-HYDROXYPROLINE (HYPak)
1al: 4-HYDROXYPROLINE (HYPal)
1am: 4-HYDROXYPROLINE (HYPam)
1an: 4-HYDROXYPROLINE (HYPan)
1ao: 4-HYDROXYPROLINE (HYPao)
1ap: 4-HYDROXYPROLINE (HYPap)
1aq: 4-HYDROXYPROLINE (HYPaq)
1ar: 4-HYDROXYPROLINE (HYPar)
1as: 4-HYDROXYPROLINE (HYPas)
1at: 4-HYDROXYPROLINE (HYPat)
1au: 4-HYDROXYPROLINE (HYPau)
1av: 4-HYDROXYPROLINE (HYPav)
1aw: 4-HYDROXYPROLINE (HYPaw)
1ax: 4-HYDROXYPROLINE (HYPax)
1ay: 4-HYDROXYPROLINE (HYPay)
1az: 4-HYDROXYPROLINE (HYPaz)
1b: 4-HYDROXYPROLINE (HYPb)
1ba: 4-HYDROXYPROLINE (HYPba)
1bb: 4-HYDROXYPROLINE (HYPbb)
1bc: 4-HYDROXYPROLINE (HYPbc)
1bd: 4-HYDROXYPROLINE (HYPbd)
1be: 4-HYDROXYPROLINE (HYPbe)
1bf: 4-HYDROXYPROLINE (HYPbf)
1bg: 4-HYDROXYPROLINE (HYPbg)
1bh: 4-HYDROXYPROLINE (HYPbh)
1bi: 4-HYDROXYPROLINE (HYPbi)
1bj: 4-HYDROXYPROLINE (HYPbj)
1bk: 4-HYDROXYPROLINE (HYPbk)
1bl: 4-HYDROXYPROLINE (HYPbl)
1bm: 4-HYDROXYPROLINE (HYPbm)
1bn: 4-HYDROXYPROLINE (HYPbn)
1bo: 4-HYDROXYPROLINE (HYPbo)
1bp: 4-HYDROXYPROLINE (HYPbp)
1bq: 4-HYDROXYPROLINE (HYPbq)
1br: 4-HYDROXYPROLINE (HYPbr)
1bs: 4-HYDROXYPROLINE (HYPbs)
1bt: 4-HYDROXYPROLINE (HYPbt)
1bu: 4-HYDROXYPROLINE (HYPbu)
1bv: 4-HYDROXYPROLINE (HYPbv)
1bw: 4-HYDROXYPROLINE (HYPbw)
1bx: 4-HYDROXYPROLINE (HYPbx)
1by: 4-HYDROXYPROLINE (HYPby)
1bz: 4-HYDROXYPROLINE (HYPbz)
1c: 4-HYDROXYPROLINE (HYPc)
1ca: 4-HYDROXYPROLINE (HYPca)
1cb: 4-HYDROXYPROLINE (HYPcb)
1cc: 4-HYDROXYPROLINE (HYPcc)
1cd: 4-HYDROXYPROLINE (HYPcd)
1ce: 4-HYDROXYPROLINE (HYPce)
1cf: 4-HYDROXYPROLINE (HYPcf)
1cg: 4-HYDROXYPROLINE (HYPcg)
1ch: 4-HYDROXYPROLINE (HYPch)
1ci: 4-HYDROXYPROLINE (HYPci)
1cj: 4-HYDROXYPROLINE (HYPcj)
1ck: 4-HYDROXYPROLINE (HYPck)
1cl: 4-HYDROXYPROLINE (HYPcl)
1cm: 4-HYDROXYPROLINE (HYPcm)
1cn: 4-HYDROXYPROLINE (HYPcn)
1co: 4-HYDROXYPROLINE (HYPco)
1cp: 4-HYDROXYPROLINE (HYPcp)
1cq: 4-HYDROXYPROLINE (HYPcq)
1cr: 4-HYDROXYPROLINE (HYPcr)
1cs: 4-HYDROXYPROLINE (HYPcs)
1ct: 4-HYDROXYPROLINE (HYPct)
1cu: 4-HYDROXYPROLINE (HYPcu)
1cv: 4-HYDROXYPROLINE (HYPcv)
1cw: 4-HYDROXYPROLINE (HYPcw)
1cx: 4-HYDROXYPROLINE (HYPcx)
1cy: 4-HYDROXYPROLINE (HYPcy)
1cz: 4-HYDROXYPROLINE (HYPcz)
1d: 4-HYDROXYPROLINE (HYPd)
1da: 4-HYDROXYPROLINE (HYPda)
1db: 4-HYDROXYPROLINE (HYPdb)
1dc: 4-HYDROXYPROLINE (HYPdc)
1dd: 4-HYDROXYPROLINE (HYPdd)
1de: 4-HYDROXYPROLINE (HYPde)
1df: 4-HYDROXYPROLINE (HYPdf)
1dg: 4-HYDROXYPROLINE (HYPdg)
1dh: 4-HYDROXYPROLINE (HYPdh)
1di: 4-HYDROXYPROLINE (HYPdi)
1dj: 4-HYDROXYPROLINE (HYPdj)
1dk: 4-HYDROXYPROLINE (HYPdk)
1dl: 4-HYDROXYPROLINE (HYPdl)
1dm: 4-HYDROXYPROLINE (HYPdm)
1dn: 4-HYDROXYPROLINE (HYPdn)
1do: 4-HYDROXYPROLINE (HYPdo)
1dp: 4-HYDROXYPROLINE (HYPdp)
1dq: 4-HYDROXYPROLINE (HYPdq)
1dr: 4-HYDROXYPROLINE (HYPdr)
1ds: 4-HYDROXYPROLINE (HYPds)
1dt: 4-HYDROXYPROLINE (HYPdt)
1du: 4-HYDROXYPROLINE (HYPdu)
1dv: 4-HYDROXYPROLINE (HYPdv)
1dw: 4-HYDROXYPROLINE (HYPdw)
1dx: 4-HYDROXYPROLINE (HYPdx)
1dy: 4-HYDROXYPROLINE (HYPdy)
1dz: 4-HYDROXYPROLINE (HYPdz)
1e: 4-HYDROXYPROLINE (HYPe)
1ea: 4-HYDROXYPROLINE (HYPea)
1eb: 4-HYDROXYPROLINE (HYPeb)
1ec: 4-HYDROXYPROLINE (HYPec)
1ed: 4-HYDROXYPROLINE (HYPed)
1ee: 4-HYDROXYPROLINE (HYPee)
1ef: 4-HYDROXYPROLINE (HYPef)
1eg: 4-HYDROXYPROLINE (HYPeg)
1eh: 4-HYDROXYPROLINE (HYPeh)
1ei: 4-HYDROXYPROLINE (HYPei)
1ej: 4-HYDROXYPROLINE (HYPej)
1ek: 4-HYDROXYPROLINE (HYPek)
1el: 4-HYDROXYPROLINE (HYPel)
1em: 4-HYDROXYPROLINE (HYPem)
1en: 4-HYDROXYPROLINE (HYPen)
1eo: 4-HYDROXYPROLINE (HYPeo)
1ep: 4-HYDROXYPROLINE (HYPep)
1eq: 4-HYDROXYPROLINE (HYPeq)
1er: 4-HYDROXYPROLINE (HYPer)
1es: 4-HYDROXYPROLINE (HYPes)
1et: 4-HYDROXYPROLINE (HYPet)
1eu: 4-HYDROXYPROLINE (HYPeu)
1ev: 4-HYDROXYPROLINE (HYPev)
1ew: 4-HYDROXYPROLINE (HYPew)
1ex: 4-HYDROXYPROLINE (HYPex)
1ey: 4-HYDROXYPROLINE (HYPey)
1ez: 4-HYDROXYPROLINE (HYPez)
1f: 4-HYDROXYPROLINE (HYPf)
1fa: 4-HYDROXYPROLINE (HYPfa)
1fb: 4-HYDROXYPROLINE (HYPfb)
1fc: 4-HYDROXYPROLINE (HYPfc)
1fd: 4-HYDROXYPROLINE (HYPfd)
1fe: 4-HYDROXYPROLINE (HYPfe)
1ff: 4-HYDROXYPROLINE (HYPff)
1fg: 4-HYDROXYPROLINE (HYPfg)
1fh: 4-HYDROXYPROLINE (HYPfh)
1fi: 4-HYDROXYPROLINE (HYPfi)
1fj: 4-HYDROXYPROLINE (HYPfj)
1fk: 4-HYDROXYPROLINE (HYPfk)
1fl: 4-HYDROXYPROLINE (HYPfl)
1fm: 4-HYDROXYPROLINE (HYPfm)
1fn: 4-HYDROXYPROLINE (HYPfn)
1fo: 4-HYDROXYPROLINE (HYPfo)
1fp: 4-HYDROXYPROLINE (HYPfp)
1fq: 4-HYDROXYPROLINE (HYPfq)
1fr: 4-HYDROXYPROLINE (HYPfr)
1fs: 4-HYDROXYPROLINE (HYPfs)
1ft: 4-HYDROXYPROLINE (HYPft)
1fu: 4-HYDROXYPROLINE (HYPfu)
1fv: 4-HYDROXYPROLINE (HYPfv)
1fw: 4-HYDROXYPROLINE (HYPfw)
1fx: 4-HYDROXYPROLINE (HYPfx)
1fy: 4-HYDROXYPROLINE (HYPfy)
1fz: 4-HYDROXYPROLINE (HYPfz)
1g: 4-HYDROXYPROLINE (HYPg)
1ga: 4-HYDROXYPROLINE (HYPga)
1gb: 4-HYDROXYPROLINE (HYPgb)
1gc: 4-HYDROXYPROLINE (HYPgc)
1gd: 4-HYDROXYPROLINE (HYPgd)
1ge: 4-HYDROXYPROLINE (HYPge)
1gf: 4-HYDROXYPROLINE (HYPgf)
1gg: 4-HYDROXYPROLINE (HYPgg)
1gh: 4-HYDROXYPROLINE (HYPgh)
1gi: 4-HYDROXYPROLINE (HYPgi)
1gj: 4-HYDROXYPROLINE (HYPgj)
1gk: 4-HYDROXYPROLINE (HYPgk)
1gl: 4-HYDROXYPROLINE (HYPgl)
1gm: 4-HYDROXYPROLINE (HYPgm)
1gn: 4-HYDROXYPROLINE (HYPgn)
1go: 4-HYDROXYPROLINE (HYPgo)
1gp: 4-HYDROXYPROLINE (HYPgp)
1gq: 4-HYDROXYPROLINE (HYPgq)
1gr: 4-HYDROXYPROLINE (HYPgr)
1gs: 4-HYDROXYPROLINE (HYPgs)
1gt: 4-HYDROXYPROLINE (HYPgt)
1gu: 4-HYDROXYPROLINE (HYPgu)
1gv: 4-HYDROXYPROLINE (HYPgv)
1gw: 4-HYDROXYPROLINE (HYPgw)
1gx: 4-HYDROXYPROLINE (HYPgx)
1gy: 4-HYDROXYPROLINE (HYPgy)
1gz: 4-HYDROXYPROLINE (HYPgz)
1h: 4-HYDROXYPROLINE (HYPh)
1ha: 4-HYDROXYPROLINE (HYPha)
1hb: 4-HYDROXYPROLINE (HYPhb)
1hc: 4-HYDROXYPROLINE (HYPhc)
1hd: 4-HYDROXYPROLINE (HYPhd)
1he: 4-HYDROXYPROLINE (HYPhe)
1hf: 4-HYDROXYPROLINE (HYPhf)
1hg: 4-HYDROXYPROLINE (HYPhg)
1hh: 4-HYDROXYPROLINE (HYPhh)
1hi: 4-HYDROXYPROLINE (HYPhi)
1hj: 4-HYDROXYPROLINE (HYPhj)
1hk: 4-HYDROXYPROLINE (HYPhk)
1hl: 4-HYDROXYPROLINE (HYPhl)
1hm: 4-HYDROXYPROLINE (HYPhm)
1hn: 4-HYDROXYPROLINE (HYPhn)
1ho: 4-HYDROXYPROLINE (HYPho)
1hp: 4-HYDROXYPROLINE (HYPhp)
1hq: 4-HYDROXYPROLINE (HYPhq)
1hr: 4-HYDROXYPROLINE (HYPhr)
1hs: 4-HYDROXYPROLINE (HYPhs)
1ht: 4-HYDROXYPROLINE (HYPht)
1hu: 4-HYDROXYPROLINE (HYPhu)
1hv: 4-HYDROXYPROLINE (HYPhv)
1hw: 4-HYDROXYPROLINE (HYPhw)
1hx: 4-HYDROXYPROLINE (HYPhx)
1hy: 4-HYDROXYPROLINE (HYPhy)
1hz: 4-HYDROXYPROLINE (HYPhz)
1i: 4-HYDROXYPROLINE (HYPi)
1ia: 4-HYDROXYPROLINE (HYPia)
1ib: 4-HYDROXYPROLINE (HYPib)
1ic: 4-HYDROXYPROLINE (HYPic)
1id: 4-HYDROXYPROLINE (HYPid)
1ie: 4-HYDROXYPROLINE (HYPie)
1if: 4-HYDROXYPROLINE (HYPif)
1ig: 4-HYDROXYPROLINE (HYPig)
1ih: 4-HYDROXYPROLINE (HYPih)
1ii: 4-HYDROXYPROLINE (HYPii)
1ij: 4-HYDROXYPROLINE (HYPij)
1ik: 4-HYDROXYPROLINE (HYPik)
1il: 4-HYDROXYPROLINE (HYPil)
1im: 4-HYDROXYPROLINE (HYPim)
1in: 4-HYDROXYPROLINE (HYPin)
1io: 4-HYDROXYPROLINE (HYPio)
1ip: 4-HYDROXYPROLINE (HYPip)
1iq: 4-HYDROXYPROLINE (HYPiq)
1ir: 4-HYDROXYPROLINE (HYPir)
1is: 4-HYDROXYPROLINE (HYPis)
1it: 4-HYDROXYPROLINE (HYPit)
1iu: 4-HYDROXYPROLINE (HYPiu)
1iv: 4-HYDROXYPROLINE (HYPiv)
1iw: 4-HYDROXYPROLINE (HYPiw)
1ix: 4-HYDROXYPROLINE (HYPix)
1iy: 4-HYDROXYPROLINE (HYPiy)
1iz: 4-HYDROXYPROLINE (HYPiz)
1j: 4-HYDROXYPROLINE (HYPj)
1ja: 4-HYDROXYPROLINE (HYPja)
1jb: 4-HYDROXYPROLINE (HYPjb)
1jc: 4-HYDROXYPROLINE (HYPjc)
1jd: 4-HYDROXYPROLINE (HYPjd)
1je: 4-HYDROXYPROLINE (HYPje)
1jf: 4-HYDROXYPROLINE (HYPjf)
1jg: 4-HYDROXYPROLINE (HYPjg)
1jh: 4-HYDROXYPROLINE (HYPjh)
1ji: 4-HYDROXYPROLINE (HYPji)
1jj: 4-HYDROXYPROLINE (HYPjj)
1jk: 4-HYDROXYPROLINE (HYPjk)
1jl: 4-HYDROXYPROLINE (HYPjl)
1jm: 4-HYDROXYPROLINE (HYPjm)
1jn: 4-HYDROXYPROLINE (HYPjn)
1jo: 4-HYDROXYPROLINE (HYPjo)
1jp: 4-HYDROXYPROLINE (HYPjp)
1jq: 4-HYDROXYPROLINE (HYPjq)
1jr: 4-HYDROXYPROLINE (HYPjr)
1js: 4-HYDROXYPROLINE (HYPjs)
1jt: 4-HYDROXYPROLINE (HYPjt)
1ju: 4-HYDROXYPROLINE (HYPju)
1jv: 4-HYDROXYPROLINE (HYPjv)
1jw: 4-HYDROXYPROLINE (HYPjw)
1jx: 4-HYDROXYPROLINE (HYPjx)
1jy: 4-HYDROXYPROLINE (HYPjy)
1jz: 4-HYDROXYPROLINE (HYPjz)
1k: 4-HYDROXYPROLINE (HYPk)
1ka: 4-HYDROXYPROLINE (HYPka)
1kb: 4-HYDROXYPROLINE (HYPkb)
1kc: 4-HYDROXYPROLINE (HYPkc)
1kd: 4-HYDROXYPROLINE (HYPkd)
1ke: 4-HYDROXYPROLINE (HYPke)
1kf: 4-HYDROXYPROLINE (HYPkf)
1kg: 4-HYDROXYPROLINE (HYPkg)
1kh: 4-HYDROXYPROLINE (HYPkh)
1ki: 4-HYDROXYPROLINE (HYPki)
1kj: 4-HYDROXYPROLINE (HYPkj)
1kk: 4-HYDROXYPROLINE (HYPkk)
1l: 4-HYDROXYPROLINE (HYPl)
1m: 4-HYDROXYPROLINE (HYPm)
1n: 4-HYDROXYPROLINE (HYPn)
1o: 4-HYDROXYPROLINE (HYPo)
1p: 4-HYDROXYPROLINE (HYPp)
1q: 4-HYDROXYPROLINE (HYPq)
1r: 4-HYDROXYPROLINE (HYPr)
1s: 4-HYDROXYPROLINE (HYPs)
1t: 4-HYDROXYPROLINE (HYPt)
1u: 4-HYDROXYPROLINE (HYPu)
1v: 4-HYDROXYPROLINE (HYPv)
1w: 4-HYDROXYPROLINE (HYPw)
1x: 4-HYDROXYPROLINE (HYPx)
1y: 4-HYDROXYPROLINE (HYPy)
1z: 4-HYDROXYPROLINE (HYPz)
2a: 5-HYDROXYLYSINE (LYZa)
2b: 5-HYDROXYLYSINE (LYZb)
2c: 5-HYDROXYLYSINE (LYZc)
2d: 5-HYDROXYLYSINE (LYZd)
2e: 5-HYDROXYLYSINE (LYZe)
2f: 5-HYDROXYLYSINE (LYZf)
2g: 5-HYDROXYLYSINE (LYZg)
2h: 5-HYDROXYLYSINE (LYZh)
2i: 5-HYDROXYLYSINE (LYZi)
2j: 5-HYDROXYLYSINE (LYZj)
2k: 5-HYDROXYLYSINE (LYZk)
2l: 5-HYDROXYLYSINE (LYZl)
2m: 5-HYDROXYLYSINE (LYZm)
2n: 5-HYDROXYLYSINE (LYZn)
2o: 5-HYDROXYLYSINE (LYZo)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
HYP
297
Mod. Amino Acid
4-HYDROXYPROLINE
2
LYZ
15
Mod. Amino Acid
5-HYDROXYLYSINE
[
close Hetero Component info
]
Sites
(0, 0)
Info
All Sites
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Label:
Sorry, no Info available
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Label:
Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
Select:
Label:
End label:
Sorry, no Info available
[
close PROSITE info
]
Exons
(43, 86)
Info
All Exons
Exon 1.6 (A:1-19 | C:1-19)
Exon 1.7 (A:20-34 | C:20-34)
Exon 1.8 (A:35-52 | C:35-52)
Exon 1.9 (A:53-70 | C:53-70)
Exon 1.10 (A:71-88 | C:71-88)
Exon 1.11 (A:89-106 | C:89-106)
Exon 1.12 (A:107-124 | C:107-124)
Exon 1.13 (A:125-139 | C:125-139)
Exon 1.14 (A:140-157 | C:140-157)
Exon 1.15 (A:158-172 | C:158-172)
Exon 1.16 (A:173-190 | C:173-190)
Exon 1.17 (A:191-223 | C:191-223)
Exon 1.18 (A:224-238 | C:224-238)
Exon 1.19 (A:239-271 | C:239-271)
Exon 1.20 (A:272-289 | C:272-289)
Exon 1.21 (A:290-325 | C:290-325)
Exon 1.22 (A:326-343 | C:326-343)
Exon 1.23 (A:344-376 | C:344-376)
Exon 1.24 (A:377-394 | C:377-394)
Exon 1.25 (A:395-427 | C:395-427)
Exon 1.26 (A:428-445 | C:428-445)
Exon 1.27 (A:446-463 | C:446-463)
Exon 1.28 (A:464-481 | C:464-481)
Exon 1.29 (A:482-499 | C:482-499)
Exon 1.30 (A:500-514 | C:500-514)
Exon 1.31 (A:515-547 | C:515-547)
Exon 1.32 (A:548-583 | C:548-583)
Exon 1.33 (A:584-619 | C:584-619)
Exon 1.34 (A:620-637 | C:620-637)
Exon 1.35 (A:638-655 | C:638-655)
Exon 1.36 (A:656-691 | C:656-691)
Exon 1.37 (A:692-709 | C:692-709)
Exon 1.38 (A:710-727 | C:710-727)
Exon 1.39 (A:728-781 | C:728-781)
Exon 1.40 (A:782-817 | C:782-817)
Exon 1.41 (A:818-853 | C:818-853)
Exon 1.42 (A:854-871 | C:854-871)
Exon 1.43a (A:872-907 | C:872-907)
Exon 1.44 (A:908-925 | C:908-925)
Exon 1.45 (A:926-961 | C:926-961)
Exon 1.46 (A:962-979 | C:962-979)
Exon 1.47 (A:980-1015 | C:980-1015)
Exon 1.48 (A:1016-1054 | C:1016-1054)
View:
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Label:
All Exon Boundaries
01: Boundary 1.5/1.6
02: Boundary 1.6/1.7
03: Boundary 1.7/1.8
04: Boundary 1.8/1.9
05: Boundary 1.9/1.10
06: Boundary 1.10/1.11
07: Boundary 1.11/1.12
08: Boundary 1.12/1.13
09: Boundary 1.13/1.14
10: Boundary 1.14/1.15
11: Boundary 1.15/1.16
12: Boundary 1.16/1.17
13: Boundary 1.17/1.18
14: Boundary 1.18/1.19
15: Boundary 1.19/1.20
16: Boundary 1.20/1.21
17: Boundary 1.21/1.22
18: Boundary 1.22/1.23
19: Boundary 1.23/1.24
20: Boundary 1.24/1.25
21: Boundary 1.25/1.26
22: Boundary 1.26/1.27
23: Boundary 1.27/1.28
24: Boundary 1.28/1.29
25: Boundary 1.29/1.30
26: Boundary 1.30/1.31
27: Boundary 1.31/1.32
28: Boundary 1.32/1.33
29: Boundary 1.33/1.34
30: Boundary 1.34/1.35
31: Boundary 1.35/1.36
32: Boundary 1.36/1.37
33: Boundary 1.37/1.38
34: Boundary 1.38/1.39
35: Boundary 1.39/1.40
36: Boundary 1.40/1.41
37: Boundary 1.41/1.42
38: Boundary 1.42/1.43a
39: Boundary 1.43a/1.44
40: Boundary 1.44/1.45
41: Boundary 1.45/1.46
42: Boundary 1.46/1.47
43: Boundary 1.47/1.48
44: Boundary 1.48/1.49
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSRNOT00000005311
1
ENSRNOE00000234457
chr10:
83622549-83622624
76
CO1A1_RAT
1-26
26
0
-
-
1.2
ENSRNOT00000005311
2
ENSRNOE00000234454
chr10:
83624089-83624283
195
CO1A1_RAT
26-91
66
0
-
-
1.3
ENSRNOT00000005311
3
ENSRNOE00000234448
chr10:
83624405-83624436
32
CO1A1_RAT
91-101
11
0
-
-
1.4
ENSRNOT00000005311
4
ENSRNOE00000037084
chr10:
83624556-83624591
36
CO1A1_RAT
102-113
12
0
-
-
1.5
ENSRNOT00000005311
5
ENSRNOE00000037111
chr10:
83624684-83624785
102
CO1A1_RAT
114-147
34
0
-
-
1.6
ENSRNOT00000005311
6
ENSRNOE00000234611
chr10:
83625717-83625785
69
CO1A1_RAT
148-170
23
2
A:1-19
C:1-19
19
19
1.7
ENSRNOT00000005311
7
ENSRNOE00000036522
chr10:
83626009-83626053
45
CO1A1_RAT
171-185
15
2
A:20-34
C:20-34
15
15
1.8
ENSRNOT00000005311
8
ENSRNOE00000036550
chr10:
83626210-83626263
54
CO1A1_RAT
186-203
18
2
A:35-52
C:35-52
18
18
1.9
ENSRNOT00000005311
9
ENSRNOE00000036575
chr10:
83626424-83626477
54
CO1A1_RAT
204-221
18
2
A:53-70
C:53-70
18
18
1.10
ENSRNOT00000005311
10
ENSRNOE00000036604
chr10:
83627045-83627098
54
CO1A1_RAT
222-239
18
2
A:71-88
C:71-88
18
18
1.11
ENSRNOT00000005311
11
ENSRNOE00000089152
chr10:
83627217-83627270
54
CO1A1_RAT
240-257
18
2
A:89-106
C:89-106
18
18
1.12
ENSRNOT00000005311
12
ENSRNOE00000234579
chr10:
83627598-83627651
54
CO1A1_RAT
258-275
18
2
A:107-124
C:107-124
18
18
1.13
ENSRNOT00000005311
13
ENSRNOE00000235139
chr10:
83627735-83627779
45
CO1A1_RAT
276-290
15
2
A:125-139
C:125-139
15
15
1.14
ENSRNOT00000005311
14
ENSRNOE00000235136
chr10:
83627902-83627955
54
CO1A1_RAT
291-308
18
2
A:140-157
C:140-157
18
18
1.15
ENSRNOT00000005311
15
ENSRNOE00000235129
chr10:
83628071-83628115
45
CO1A1_RAT
309-323
15
2
A:158-172
C:158-172
15
15
1.16
ENSRNOT00000005311
16
ENSRNOE00000235122
chr10:
83628249-83628302
54
CO1A1_RAT
324-341
18
2
A:173-190
C:173-190
18
18
1.17
ENSRNOT00000005311
17
ENSRNOE00000036686
chr10:
83628538-83628636
99
CO1A1_RAT
342-374
33
2
A:191-223
C:191-223
33
33
1.18
ENSRNOT00000005311
18
ENSRNOE00000036698
chr10:
83628726-83628770
45
CO1A1_RAT
375-389
15
2
A:224-238
C:224-238
15
15
1.19
ENSRNOT00000005311
19
ENSRNOE00000036717
chr10:
83628866-83628964
99
CO1A1_RAT
390-422
33
2
A:239-271
C:239-271
33
33
1.20
ENSRNOT00000005311
20
ENSRNOE00000036732
chr10:
83629092-83629145
54
CO1A1_RAT
423-440
18
2
A:272-289
C:272-289
18
18
1.21
ENSRNOT00000005311
21
ENSRNOE00000333850
chr10:
83629323-83629430
108
CO1A1_RAT
441-476
36
2
A:290-325
C:290-325
36
36
1.22
ENSRNOT00000005311
22
ENSRNOE00000036765
chr10:
83629529-83629582
54
CO1A1_RAT
477-494
18
2
A:326-343
C:326-343
18
18
1.23
ENSRNOT00000005311
23
ENSRNOE00000324723
chr10:
83629866-83629964
99
CO1A1_RAT
495-527
33
2
A:344-376
C:344-376
33
33
1.24
ENSRNOT00000005311
24
ENSRNOE00000036788
chr10:
83630100-83630153
54
CO1A1_RAT
528-545
18
2
A:377-394
C:377-394
18
18
1.25
ENSRNOT00000005311
25
ENSRNOE00000036803
chr10:
83630244-83630342
99
CO1A1_RAT
546-578
33
2
A:395-427
C:395-427
33
33
1.26
ENSRNOT00000005311
26
ENSRNOE00000037160
chr10:
83630890-83630943
54
CO1A1_RAT
579-596
18
2
A:428-445
C:428-445
18
18
1.27
ENSRNOT00000005311
27
ENSRNOE00000037171
chr10:
83631080-83631133
54
CO1A1_RAT
597-614
18
2
A:446-463
C:446-463
18
18
1.28
ENSRNOT00000005311
28
ENSRNOE00000037188
chr10:
83631234-83631287
54
CO1A1_RAT
615-632
18
2
A:464-481
C:464-481
18
18
1.29
ENSRNOT00000005311
29
ENSRNOE00000037202
chr10:
83631396-83631449
54
CO1A1_RAT
633-650
18
2
A:482-499
C:482-499
18
18
1.30
ENSRNOT00000005311
30
ENSRNOE00000037217
chr10:
83631832-83631876
45
CO1A1_RAT
651-665
15
2
A:500-514
C:500-514
15
15
1.31
ENSRNOT00000005311
31
ENSRNOE00000036818
chr10:
83631964-83632062
99
CO1A1_RAT
666-698
33
2
A:515-547
C:515-547
33
33
1.32
ENSRNOT00000005311
32
ENSRNOE00000037229
chr10:
83632272-83632379
108
CO1A1_RAT
699-734
36
2
A:548-583
C:548-583
36
36
1.33
ENSRNOT00000005311
33
ENSRNOE00000037245
chr10:
83632725-83632832
108
CO1A1_RAT
735-770
36
2
A:584-619
C:584-619
36
36
1.34
ENSRNOT00000005311
34
ENSRNOE00000037258
chr10:
83633023-83633076
54
CO1A1_RAT
771-788
18
2
A:620-637
C:620-637
18
18
1.35
ENSRNOT00000005311
35
ENSRNOE00000305568
chr10:
83633201-83633254
54
CO1A1_RAT
789-806
18
2
A:638-655
C:638-655
18
18
1.36
ENSRNOT00000005311
36
ENSRNOE00000037283
chr10:
83633492-83633599
108
CO1A1_RAT
807-842
36
2
A:656-691
C:656-691
36
36
1.37
ENSRNOT00000005311
37
ENSRNOE00000037301
chr10:
83633688-83633741
54
CO1A1_RAT
843-860
18
2
A:692-709
C:692-709
18
18
1.38
ENSRNOT00000005311
38
ENSRNOE00000037313
chr10:
83633850-83633903
54
CO1A1_RAT
861-878
18
2
A:710-727
C:710-727
18
18
1.39
ENSRNOT00000005311
39
ENSRNOE00000036832
chr10:
83634041-83634202
162
CO1A1_RAT
879-932
54
2
A:728-781
C:728-781
54
54
1.40
ENSRNOT00000005311
40
ENSRNOE00000037341
chr10:
83634302-83634409
108
CO1A1_RAT
933-968
36
2
A:782-817
C:782-817
36
36
1.41
ENSRNOT00000005311
41
ENSRNOE00000037269
chr10:
83634761-83634868
108
CO1A1_RAT
969-1004
36
2
A:818-853
C:818-853
36
36
1.42
ENSRNOT00000005311
42
ENSRNOE00000037369
chr10:
83634971-83635024
54
CO1A1_RAT
1005-1022
18
2
A:854-871
C:854-871
18
18
1.43a
ENSRNOT00000005311
43a
ENSRNOE00000292929
chr10:
83635143-83635250
108
CO1A1_RAT
1023-1058
36
2
A:872-907
C:872-907
36
36
1.44
ENSRNOT00000005311
44
ENSRNOE00000328523
chr10:
83635592-83635645
54
CO1A1_RAT
1059-1076
18
2
A:908-925
C:908-925
18
18
1.45
ENSRNOT00000005311
45
ENSRNOE00000343761
chr10:
83635759-83635866
108
CO1A1_RAT
1077-1112
36
2
A:926-961
C:926-961
36
36
1.46
ENSRNOT00000005311
46
ENSRNOE00000036926
chr10:
83636109-83636162
54
CO1A1_RAT
1113-1130
18
2
A:962-979
C:962-979
18
18
1.47
ENSRNOT00000005311
47
ENSRNOE00000328981
chr10:
83636486-83636593
108
CO1A1_RAT
1131-1166
36
2
A:980-1015
C:980-1015
36
36
1.48
ENSRNOT00000005311
48
ENSRNOE00000234434
chr10:
83636679-83636961
283
CO1A1_RAT
1167-1261
95
2
A:1016-1054
C:1016-1054
39
39
1.49
ENSRNOT00000005311
49
ENSRNOE00000234427
chr10:
83637099-83637289
191
CO1A1_RAT
1261-1324
64
0
-
-
1.50
ENSRNOT00000005311
50
ENSRNOE00000037517
chr10:
83637495-83637737
243
CO1A1_RAT
1325-1405
81
0
-
-
1.51
ENSRNOT00000005311
51
ENSRNOE00000358668
chr10:
83637869-83638015
147
CO1A1_RAT
1406-1453
48
0
-
-
[
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SCOP Domains
(1, 3)
Info
All SCOP Domains
1a: SCOP_d3hqva_ (A:)
1b: SCOP_d3hqvb_ (B:)
1c: SCOP_d3hqvc_ (C:)
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Class
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Low resolution protein structures
(283)
Fold
:
Collagen fibre
(1)
Superfamily
:
Collagen fibre
(1)
Family
:
Collagen fibre
(1)
Protein domain
:
Collagen I alpha
(1)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(1)
1a
d3hqva_
A:
1b
d3hqvb_
B:
1c
d3hqvc_
C:
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Asym.Unit (73 KB)
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