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3GXG
Biol. Unit 5
Info
Asym.Unit (134 KB)
Biol.Unit 1 (34 KB)
Biol.Unit 2 (35 KB)
Biol.Unit 3 (34 KB)
Biol.Unit 4 (34 KB)
Biol.Unit 5 (250 KB)
Biol.Unit 6 (247 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF PUTATIVE PHOSPHATASE (DUF442) (YP_001181608.1) FROM SHEWANELLA PUTREFACIENS CN-32 AT 1.60 A RESOLUTION
Authors
:
Joint Center For Structural Genomics (Jcsg)
Date
:
02 Apr 09 (Deposition) - 07 Jul 09 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.60
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Biol. Unit 5: A,B (4x)
Biol. Unit 6: C,D (4x)
Keywords
:
Yp_001181608. 1, Putative Phosphatase (Duf442), Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi-2, Tyrosine Phosphatase, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Joint Center For Structural Genomics (Jcsg)
Crystal Structure Of Putative Phosphatase (Duf442) (Yp_001181608. 1) From Shewanella Putrefaciens Cn-32 At 1. 60 A Resolution
To Be Published
[
close entry info
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Hetero Components
(4, 88)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
1c: ACETATE ION (ACTc)
1d: ACETATE ION (ACTd)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
2c: CHLORIDE ION (CLc)
2d: CHLORIDE ION (CLd)
2e: CHLORIDE ION (CLe)
2f: CHLORIDE ION (CLf)
3a: 1,2-ETHANEDIOL (EDOa)
3b: 1,2-ETHANEDIOL (EDOb)
3c: 1,2-ETHANEDIOL (EDOc)
3d: 1,2-ETHANEDIOL (EDOd)
3e: 1,2-ETHANEDIOL (EDOe)
3f: 1,2-ETHANEDIOL (EDOf)
3g: 1,2-ETHANEDIOL (EDOg)
3h: 1,2-ETHANEDIOL (EDOh)
3i: 1,2-ETHANEDIOL (EDOi)
3j: 1,2-ETHANEDIOL (EDOj)
3k: 1,2-ETHANEDIOL (EDOk)
3l: 1,2-ETHANEDIOL (EDOl)
4a: SELENOMETHIONINE (MSEa)
4b: SELENOMETHIONINE (MSEb)
4c: SELENOMETHIONINE (MSEc)
4d: SELENOMETHIONINE (MSEd)
4e: SELENOMETHIONINE (MSEe)
4f: SELENOMETHIONINE (MSEf)
4g: SELENOMETHIONINE (MSEg)
4h: SELENOMETHIONINE (MSEh)
4i: SELENOMETHIONINE (MSEi)
4j: SELENOMETHIONINE (MSEj)
4k: SELENOMETHIONINE (MSEk)
4l: SELENOMETHIONINE (MSEl)
4m: SELENOMETHIONINE (MSEm)
4n: SELENOMETHIONINE (MSEn)
4o: SELENOMETHIONINE (MSEo)
4p: SELENOMETHIONINE (MSEp)
4q: SELENOMETHIONINE (MSEq)
4r: SELENOMETHIONINE (MSEr)
4s: SELENOMETHIONINE (MSEs)
4t: SELENOMETHIONINE (MSEt)
5a: SULFATE ION (SO4a)
5b: SULFATE ION (SO4b)
5c: SULFATE ION (SO4c)
5d: SULFATE ION (SO4d)
5e: SULFATE ION (SO4e)
5f: SULFATE ION (SO4f)
5g: SULFATE ION (SO4g)
5h: SULFATE ION (SO4h)
5i: SULFATE ION (SO4i)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
8
Ligand/Ion
ACETATE ION
2
CL
-1
Ligand/Ion
CHLORIDE ION
3
EDO
20
Ligand/Ion
1,2-ETHANEDIOL
4
MSE
40
Mod. Amino Acid
SELENOMETHIONINE
5
SO4
20
Ligand/Ion
SULFATE ION
[
close Hetero Component info
]
Sites
(17, 17)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
CYS A:125 , LEU A:126 , ALA A:127 , ASN A:128 , TYR A:129 , ARG A:130 , HOH A:414 , HOH A:418
BINDING SITE FOR RESIDUE SO4 A 201
02
AC2
SOFTWARE
ARG A:34 , ALA A:35 , ALA A:127 , ASN A:145 , HOH A:618 , HOH A:1092
BINDING SITE FOR RESIDUE SO4 A 208
03
AC3
SOFTWARE
ASN A:23 , PRO A:41 , HOH A:821 , HOH A:892 , HOH A:897 , ASN B:23 , PRO B:41 , HOH B:481
BINDING SITE FOR RESIDUE SO4 A 209
04
AC4
SOFTWARE
GLN A:53 , HOH B:453
BINDING SITE FOR RESIDUE CL A 210
05
AC5
SOFTWARE
ASN A:147 , THR A:151 , HOH A:943
BINDING SITE FOR RESIDUE CL A 211
06
AC6
SOFTWARE
LYS A:164 , ALA A:174 , HOH A:518
BINDING SITE FOR RESIDUE CL A 214
07
AC7
SOFTWARE
PRO A:70 , ASP A:71 , SER A:72 , TYR A:93 , HOH A:789 , HOH A:957 , HOH A:981
BINDING SITE FOR RESIDUE EDO A 217
08
AC8
SOFTWARE
ASN A:50 , GLU A:51 , HIS A:77 , HOH A:647 , HOH A:1086 , LYS C:58
BINDING SITE FOR RESIDUE EDO A 221
09
AC9
SOFTWARE
PRO A:101 , GLU A:171 , HOH A:388 , HOH A:399 , HOH A:403 , ALA B:174 , HOH B:1157
BINDING SITE FOR RESIDUE EDO A 379
10
BC1
SOFTWARE
ALA A:149 , MSE A:152 , ASP A:157 , HOH A:401 , HOH A:638 , HOH A:1018 , HOH A:1109
BINDING SITE FOR RESIDUE ACT A 380
11
BC2
SOFTWARE
CYS B:125 , LEU B:126 , ALA B:127 , ASN B:128 , TYR B:129 , ARG B:130 , HOH B:420 , HOH B:421
BINDING SITE FOR RESIDUE SO4 B 202
12
BC3
SOFTWARE
ARG B:34 , ALA B:127 , ASN B:145 , HOH B:551 , HOH B:1035
BINDING SITE FOR RESIDUE SO4 B 207
13
BC4
SOFTWARE
ASN B:50 , GLU B:51
BINDING SITE FOR RESIDUE CL B 212
14
BC5
SOFTWARE
ASN B:147 , THR B:151
BINDING SITE FOR RESIDUE CL B 213
15
BC6
SOFTWARE
ASP B:71 , SER B:72 , TYR B:93 , HOH B:719 , HOH B:806
BINDING SITE FOR RESIDUE EDO B 216
16
BC7
SOFTWARE
ALA A:174 , HOH A:507 , HOH A:1159 , PRO B:101 , LYS B:102 , GLU B:171 , HOH B:396 , HOH B:406 , HOH B:422
BINDING SITE FOR RESIDUE EDO B 379
17
BC8
SOFTWARE
MSE B:152 , ASP B:157 , HOH B:432 , HOH B:698 , HOH B:711
BINDING SITE FOR RESIDUE ACT B 380
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(0, 0)
Info
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Sorry, no Info available
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CATH Domains
(0, 0)
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Pfam Domains
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Example Commands
Example Command
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select :A, :C
select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
select 5-10:A
select residue range 5 to 10 in chain 'A'
select protein & not helix & not sheet
select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
ssbonds 100
show SS bonds with a radius of 100 units (=0.4Å)
wireframe 100
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Asym.Unit (134 KB)
Header - Asym.Unit
Biol.Unit 1 (34 KB)
Header - Biol.Unit 1
Biol.Unit 2 (35 KB)
Header - Biol.Unit 2
Biol.Unit 3 (34 KB)
Header - Biol.Unit 3
Biol.Unit 4 (34 KB)
Header - Biol.Unit 4
Biol.Unit 5 (250 KB)
Header - Biol.Unit 5
Biol.Unit 6 (247 KB)
Header - Biol.Unit 6
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