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3FM8
Asym. Unit
Info
Asym.Unit (156 KB)
Biol.Unit 1 (78 KB)
Biol.Unit 2 (75 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF FULL LENGTH CENTAURIN ALPHA-1 BOUND WITH THE FHA DOMAIN OF KIF13B (CAPRI TARGET)
Authors
:
L. Shen, Y. Tong, W. Tempel, F. Mackenzie, C. H. Arrowsmith, A. M. Edward C. Bountra, J. Weigelt, A. Bochkarev, H. Park, Structural Genomics Consortium (Sgc)
Date
:
19 Dec 08 (Deposition) - 25 Aug 09 (Release) - 25 Sep 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,C (1x)
Biol. Unit 2: B,D (1x)
Keywords
:
Kinesin, Gap, Gtpase Activation, Structural Genomics Consortium, Sgc, Atp-Binding, Cytoskeleton, Microtubule, Motor Protein, Nucleotide- Binding, Phosphoprotein, Metal-Binding, Nucleus, Zinc-Finger, Metal Binding Protein, Transport Protein-Hydrolase Activator Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. Tong, W. Tempel, H. Wang, K. Yamada, L. Shen, G. A. Senisterra, F. Mackenzie, A. H. Chishti, H. W. Park
Phosphorylation-Independent Dual-Site Binding Of The Fha Domain Of Kif13 Mediates Phosphoinositide Transport Via Centaurin Alpha1.
Proc. Natl. Acad. Sci. Usa V. 107 20346 2010
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Hetero Components
(3, 27)
Info
All Hetero Components
1a: SULFATE ION (SO4a)
1b: SULFATE ION (SO4b)
1c: SULFATE ION (SO4c)
2a: UNKNOWN ATOM OR ION (UNXa)
2b: UNKNOWN ATOM OR ION (UNXb)
2c: UNKNOWN ATOM OR ION (UNXc)
2d: UNKNOWN ATOM OR ION (UNXd)
2e: UNKNOWN ATOM OR ION (UNXe)
2f: UNKNOWN ATOM OR ION (UNXf)
2g: UNKNOWN ATOM OR ION (UNXg)
2h: UNKNOWN ATOM OR ION (UNXh)
2i: UNKNOWN ATOM OR ION (UNXi)
2j: UNKNOWN ATOM OR ION (UNXj)
2k: UNKNOWN ATOM OR ION (UNXk)
2l: UNKNOWN ATOM OR ION (UNXl)
2m: UNKNOWN ATOM OR ION (UNXm)
2n: UNKNOWN ATOM OR ION (UNXn)
2o: UNKNOWN ATOM OR ION (UNXo)
2p: UNKNOWN ATOM OR ION (UNXp)
2q: UNKNOWN ATOM OR ION (UNXq)
2r: UNKNOWN ATOM OR ION (UNXr)
2s: UNKNOWN ATOM OR ION (UNXs)
2t: UNKNOWN ATOM OR ION (UNXt)
2u: UNKNOWN ATOM OR ION (UNXu)
2v: UNKNOWN ATOM OR ION (UNXv)
3a: ZINC ION (ZNa)
3b: ZINC ION (ZNb)
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Label:
No.
Name
Count
Type
Full Name
1
SO4
3
Ligand/Ion
SULFATE ION
2
UNX
22
Ligand/Ion
UNKNOWN ATOM OR ION
3
ZN
2
Ligand/Ion
ZINC ION
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Sites
(5, 5)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
CYS C:21 , CYS C:24 , CYS C:41 , CYS C:44
BINDING SITE FOR RESIDUE ZN C 401
2
AC2
SOFTWARE
LYS C:3 , GLU C:4 , ARG C:5 , ARG C:6 , TRP C:65 , ARG C:156
BINDING SITE FOR RESIDUE SO4 C 375
3
AC3
SOFTWARE
CYS D:21 , CYS D:24 , CYS D:41 , CYS D:44
BINDING SITE FOR RESIDUE ZN D 401
4
AC4
SOFTWARE
HIS D:193 , GLU D:213 , ASP D:214 , GLY D:215 , HOH D:422 , HOH D:434
BINDING SITE FOR RESIDUE SO4 D 375
5
AC5
SOFTWARE
LYS D:261 , ARG D:273 , TYR D:284 , ARG D:294
BINDING SITE FOR RESIDUE SO4 D 376
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SAPs(SNPs)/Variants
(1, 2)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_047470 (S241S, chain C/D, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_047470
G
241
S
ADAP1_HUMAN
Polymorphism
10256887
C/D
S
241
S
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 6)
Info
All PROSITE Patterns/Profiles
1: ARFGAP (C:7-126,D:7-126)
2: PH_DOMAIN (C:129-230,D:129-230|C:252-356,D:25...)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ARFGAP
PS50115
ARF GTPase-activating proteins domain profile.
ADAP1_HUMAN
7-126
2
C:7-126
D:7-126
2
PH_DOMAIN
PS50003
PH domain profile.
ADAP1_HUMAN
129-230
252-356
4
C:129-230
D:129-230
C:252-356
D:252-356
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3fm8a_ (A:)
1b: SCOP_d3fm8b_ (B:)
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Class
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All beta proteins
(24004)
Fold
:
SMAD/FHA domain
(62)
Superfamily
:
SMAD/FHA domain
(62)
Family
:
automated matches
(9)
Protein domain
:
automated matches
(9)
Human (Homo sapiens) [TaxId: 9606]
(3)
1a
d3fm8a_
A:
1b
d3fm8b_
B:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
(0, 0)
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Asym.Unit (156 KB)
Header - Asym.Unit
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