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3EDN
Asym. Unit
Info
Asym.Unit (125 KB)
Biol.Unit 1 (119 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE BACILLUS ANTHRACIS PHENAZINE BIOSYNTHESIS PROTEIN, PHZF FAMILY
Authors
:
S. M. Anderson, J. S. Brunzelle, O. Onopriyenko, A. Savchenko, W. F. Anderson, Center For Structural Genomics Of Infectious Diseases (Csgid)
Date
:
03 Sep 08 (Deposition) - 07 Oct 08 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.50
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Diaminopimelate Epimerase-Like Fold, Alpha And Beta Protein Class, Structural Genomics, Center For Structural Genomics Of Infectious Diseases, Csgid, Biosynthetic Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. M. Anderson, J. S. Brunzelle, O. Onopriyenko, A. Savchenko, W. F. Anderson
Crystal Structure Of The Bacillus Anthracis Phenazine Biosynthesis Protein, Phzf Family
To Be Published
(for further references see the
PDB file header
)
[
close entry info
]
Hetero Components
(4, 37)
Info
All Hetero Components
1a: MAGNESIUM ION (MGa)
2a: SELENOMETHIONINE (MSEa)
2b: SELENOMETHIONINE (MSEb)
2c: SELENOMETHIONINE (MSEc)
2d: SELENOMETHIONINE (MSEd)
2e: SELENOMETHIONINE (MSEe)
2f: SELENOMETHIONINE (MSEf)
2g: SELENOMETHIONINE (MSEg)
2h: SELENOMETHIONINE (MSEh)
2i: SELENOMETHIONINE (MSEi)
2j: SELENOMETHIONINE (MSEj)
2k: SELENOMETHIONINE (MSEk)
2l: SELENOMETHIONINE (MSEl)
2m: SELENOMETHIONINE (MSEm)
2n: SELENOMETHIONINE (MSEn)
2o: SELENOMETHIONINE (MSEo)
2p: SELENOMETHIONINE (MSEp)
2q: SELENOMETHIONINE (MSEq)
2r: SELENOMETHIONINE (MSEr)
2s: SELENOMETHIONINE (MSEs)
2t: SELENOMETHIONINE (MSEt)
3a: SUCCINIC ACID (SINa)
4a: SULFATE ION (SO4a)
4b: SULFATE ION (SO4b)
4c: SULFATE ION (SO4c)
4d: SULFATE ION (SO4d)
4e: SULFATE ION (SO4e)
4f: SULFATE ION (SO4f)
4g: SULFATE ION (SO4g)
4h: SULFATE ION (SO4h)
4i: SULFATE ION (SO4i)
4j: SULFATE ION (SO4j)
4k: SULFATE ION (SO4k)
4l: SULFATE ION (SO4l)
4m: SULFATE ION (SO4m)
4n: SULFATE ION (SO4n)
4o: SULFATE ION (SO4o)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
MG
1
Ligand/Ion
MAGNESIUM ION
2
MSE
20
Mod. Amino Acid
SELENOMETHIONINE
3
SIN
1
Ligand/Ion
SUCCINIC ACID
4
SO4
15
Ligand/Ion
SULFATE ION
[
close Hetero Component info
]
Sites
(17, 17)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
PHE A:12 , GLY A:74 , HIS A:75 , VAL A:228 , THR A:229 , GLY A:230 , THR A:231 , HOH A:366 , HOH A:375 , HOH A:404 , HOH A:463 , HOH A:487
BINDING SITE FOR RESIDUE SO4 A 300
02
AC2
SOFTWARE
PHE A:7 , ARG A:87 , GLU A:294 , HOH A:365 , HOH A:437 , HOH A:639 , HOH A:683 , HOH A:688 , GLU B:91 , GLU B:92
BINDING SITE FOR RESIDUE SO4 A 301
03
AC3
SOFTWARE
ARG A:38 , LYS A:42 , LYS A:129 , ASP A:130 , HOH A:502 , HOH A:616
BINDING SITE FOR RESIDUE SO4 A 302
04
AC4
SOFTWARE
ASN A:162 , TRP A:163 , ASN A:194 , HOH A:344 , HOH A:449 , HOH A:461 , HOH A:651 , HOH A:678 , HOH A:752
BINDING SITE FOR RESIDUE SO4 A 303
05
AC5
SOFTWARE
THR A:223 , ILE A:224 , GLU A:225 , HOH A:711
BINDING SITE FOR RESIDUE SO4 A 304
06
AC6
SOFTWARE
ASP A:206 , GLU A:207 , LYS A:208 , ARG A:267 , HOH A:722
BINDING SITE FOR RESIDUE SO4 A 305
07
AC7
SOFTWARE
PHE A:248 , ASP A:249 , HOH A:350 , HOH A:377 , HOH A:402 , HOH A:590 , HOH A:672 , GLU B:137 , HIS B:140
BINDING SITE FOR RESIDUE SO4 A 306
08
AC8
SOFTWARE
ARG A:85 , HOH A:472 , HOH A:480 , SER B:95 , HOH B:704 , HOH B:948
BINDING SITE FOR RESIDUE SO4 A 307
09
AC9
SOFTWARE
LEU A:31 , MSE A:36 , ARG A:60 , ARG A:62 , MG A:309 , HOH A:310 , HOH A:311 , LEU B:31 , MSE B:36 , ARG B:60 , ARG B:62 , HOH B:619 , HOH B:620
BINDING SITE FOR RESIDUE SIN A 308
10
BC1
SOFTWARE
SIN A:308 , HOH A:310 , HOH A:311 , HOH B:619 , HOH B:620
BINDING SITE FOR RESIDUE MG A 309
11
BC2
SOFTWARE
GLY B:74 , HIS B:75 , VAL B:228 , THR B:229 , GLY B:230 , THR B:231 , HOH B:780 , HOH B:787 , HOH B:791 , HOH B:822 , HOH B:920
BINDING SITE FOR RESIDUE SO4 B 300
12
BC3
SOFTWARE
SER B:196 , HIS B:215 , SER B:217 , SER B:218 , ALA B:221 , HOH B:747 , HOH B:810 , HOH B:868
BINDING SITE FOR RESIDUE SO4 B 301
13
BC4
SOFTWARE
GLU A:33 , ARG A:62 , LYS A:101 , LYS A:246 , GLU B:33 , GLU B:34 , HOH B:855 , HOH B:911
BINDING SITE FOR RESIDUE SO4 B 302
14
BC5
SOFTWARE
LYS B:129 , ASP B:130 , HOH B:799 , HOH B:882 , HOH B:930
BINDING SITE FOR RESIDUE SO4 B 303
15
BC6
SOFTWARE
THR B:223 , ILE B:224 , GLU B:225 , HOH B:979
BINDING SITE FOR RESIDUE SO4 B 304
16
BC7
SOFTWARE
HIS A:8 , HOH A:352 , HOH B:642 , HOH B:732 , HOH B:806 , HOH B:1013
BINDING SITE FOR RESIDUE SO4 B 305
17
BC8
SOFTWARE
HOH A:370 , GLN B:108 , LYS B:120 , HOH B:862
BINDING SITE FOR RESIDUE SO4 B 306
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
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;
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Sorry, no Info available
[
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d3edna1 (A:1-131)
1b: SCOP_d3edna2 (A:132-299)
1c: SCOP_d3ednb1 (B:1-131)
1d: SCOP_d3ednb2 (B:132-299)
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)
(
)
Families
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Diaminopimelate epimerase-like
(37)
Superfamily
:
Diaminopimelate epimerase-like
(37)
Family
:
automated matches
(15)
Protein domain
:
automated matches
(15)
Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
(1)
1a
d3edna1
A:1-131
1b
d3edna2
A:132-299
1c
d3ednb1
B:1-131
1d
d3ednb2
B:132-299
[
close SCOP info
]
CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
[
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Pfam Domains
(0, 0)
Info
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Sorry, no Info available
[
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Asymmetric Unit 1
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