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3CQ0
Asym. Unit
Info
Asym.Unit (124 KB)
Biol.Unit 1 (118 KB)
Biol.Unit 2 (61 KB)
Biol.Unit 3 (61 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF TAL2_YEAST
Authors
:
H. Huang, L. Niu, M. Teng
Date
:
01 Apr 08 (Deposition) - 07 Apr 09 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Biol. Unit 2: A (1x)
Biol. Unit 3: B (1x)
Keywords
:
Transaldolase, Alpha/Beta Barrel, Pentose Shunt, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Huang, H. Rong, X. Li, S. Tong, Z. Zhu, L. Niu, M. Teng
The Crystal Structure And Identification Of Nqm1/Ygr043C, A Transaldolase From Saccharomyces Cerevisiae
Proteins V. 73 1076 2008
[
close entry info
]
Hetero Components
(3, 33)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
1e: 1,2-ETHANEDIOL (EDOe)
1f: 1,2-ETHANEDIOL (EDOf)
1g: 1,2-ETHANEDIOL (EDOg)
1h: 1,2-ETHANEDIOL (EDOh)
1i: 1,2-ETHANEDIOL (EDOi)
1j: 1,2-ETHANEDIOL (EDOj)
1k: 1,2-ETHANEDIOL (EDOk)
1l: 1,2-ETHANEDIOL (EDOl)
1m: 1,2-ETHANEDIOL (EDOm)
1n: 1,2-ETHANEDIOL (EDOn)
1o: 1,2-ETHANEDIOL (EDOo)
1p: 1,2-ETHANEDIOL (EDOp)
1q: 1,2-ETHANEDIOL (EDOq)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
2f: GLYCEROL (GOLf)
2g: GLYCEROL (GOLg)
2h: GLYCEROL (GOLh)
2i: GLYCEROL (GOLi)
2j: GLYCEROL (GOLj)
2k: GLYCEROL (GOLk)
2l: GLYCEROL (GOLl)
2m: GLYCEROL (GOLm)
2n: GLYCEROL (GOLn)
3a: TETRAETHYLENE GLYCOL (PG4a)
3b: TETRAETHYLENE GLYCOL (PG4b)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
EDO
17
Ligand/Ion
1,2-ETHANEDIOL
2
GOL
14
Ligand/Ion
GLYCEROL
3
PG4
2
Ligand/Ion
TETRAETHYLENE GLYCOL
[
close Hetero Component info
]
Sites
(32, 32)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
VAL A:121 , LYS A:122 , GLU A:157 , LYS A:161 , HIS A:162 , HOH A:472
BINDING SITE FOR RESIDUE EDO A 340
02
AC2
SOFTWARE
ASN A:184 , VAL A:185 , HOH A:542
BINDING SITE FOR RESIDUE EDO A 341
03
AC3
SOFTWARE
LYS A:20 , GLU A:40 , GLN A:42 , HOH A:475 , HOH A:635
BINDING SITE FOR RESIDUE EDO A 342
04
AC4
SOFTWARE
TYR A:70 , HIS A:74 , ASN A:84 , HIS A:126 , HOH A:650
BINDING SITE FOR RESIDUE EDO A 343
05
AC5
SOFTWARE
HIS A:79 , TYR A:326 , ASP B:293 , HOH B:371
BINDING SITE FOR RESIDUE EDO A 344
06
AC6
SOFTWARE
LEU A:98 , LYS A:99 , VAL A:100 , VAL A:101 , PRO A:102 , ARG A:140
BINDING SITE FOR RESIDUE EDO A 345
07
AC7
SOFTWARE
THR A:148 , TRP A:149 , LEU A:301 , THR A:308 , HOH A:360 , HOH A:366 , THR B:148 , TRP B:149 , THR B:308 , HOH B:358
BINDING SITE FOR RESIDUE PG4 A 346
08
AC8
SOFTWARE
ARG A:227 , LYS A:281 , GLU A:282 , HOH A:588
BINDING SITE FOR RESIDUE EDO A 347
09
AC9
SOFTWARE
HOH A:420 , HOH A:429 , HOH A:589
BINDING SITE FOR RESIDUE EDO A 348
10
BC1
SOFTWARE
SER A:289 , EDO B:348 , HOH B:567
BINDING SITE FOR RESIDUE EDO A 349
11
BC2
SOFTWARE
LYS B:88
BINDING SITE FOR RESIDUE EDO B 340
12
BC3
SOFTWARE
TYR B:70 , ASN B:84 , HIS B:126 , GOL B:351
BINDING SITE FOR RESIDUE EDO B 341
13
BC4
SOFTWARE
LYS B:118 , ALA B:119 , LYS B:122 , HOH B:476
BINDING SITE FOR RESIDUE EDO B 342
14
BC5
SOFTWARE
LYS B:20 , GLY B:23 , THR B:24 , HIS B:25 , HOH B:376
BINDING SITE FOR RESIDUE EDO B 343
15
BC6
SOFTWARE
LEU B:125 , HIS B:126 , HOH B:467 , HOH B:589
BINDING SITE FOR RESIDUE EDO B 345
16
BC7
SOFTWARE
THR B:95 , LYS B:99 , ALA B:134 , VAL B:136 , ARG B:140 , HOH B:572 , HOH B:593 , HOH B:594
BINDING SITE FOR RESIDUE PG4 B 346
17
BC8
SOFTWARE
HOH B:463
BINDING SITE FOR RESIDUE EDO B 347
18
BC9
SOFTWARE
EDO A:349 , GLU B:323 , HOH B:603
BINDING SITE FOR RESIDUE EDO B 348
19
CC1
SOFTWARE
LYS A:20 , THR A:24 , HIS A:25 , HOH A:371 , HOH A:621 , HOH A:622 , HOH A:635
BINDING SITE FOR RESIDUE GOL A 350
20
CC2
SOFTWARE
MET A:86 , ASP A:87 , LEU A:90 , ASP A:110 , ARG A:112 , LYS A:123 , ILE A:322 , HOH A:372 , HOH A:393 , HOH A:411 , HOH A:643
BINDING SITE FOR RESIDUE GOL A 351
21
CC3
SOFTWARE
HIS A:79 , GLU A:83 , ASP A:110 , ARG A:112 , LEU A:113 , HOH A:521
BINDING SITE FOR RESIDUE GOL A 352
22
CC4
SOFTWARE
HIS A:228 , GLY A:229 , TYR A:230 , LYS A:287
BINDING SITE FOR RESIDUE GOL A 353
23
CC5
SOFTWARE
ASP A:29 , ASN A:47 , LYS A:144 , PHE A:191 , ALA A:237 , SER A:238 , THR A:255 , HOH A:398 , HOH A:529 , HOH A:554
BINDING SITE FOR RESIDUE GOL A 354
24
CC6
SOFTWARE
GLU A:283 , HOH A:647 , HOH A:648
BINDING SITE FOR RESIDUE GOL A 355
25
CC7
SOFTWARE
SER A:319 , ALA A:320 , GLU A:323 , HOH A:380 , HOH A:439
BINDING SITE FOR RESIDUE GOL A 356
26
CC8
SOFTWARE
ARG B:194 , SER B:238 , ARG B:240 , GOL B:353
BINDING SITE FOR RESIDUE GOL B 349
27
CC9
SOFTWARE
ASP B:87 , LEU B:90 , ASP B:110 , ARG B:112 , LYS B:123 , ILE B:322 , HOH B:401 , HOH B:426 , HOH B:456 , HOH B:468
BINDING SITE FOR RESIDUE GOL B 350
28
DC1
SOFTWARE
ASP B:87 , LYS B:123 , HIS B:126 , EDO B:341 , HOH B:476 , HOH B:579
BINDING SITE FOR RESIDUE GOL B 351
29
DC2
SOFTWARE
GLU B:159 , ASN B:184 , VAL B:185
BINDING SITE FOR RESIDUE GOL B 352
30
DC3
SOFTWARE
ASP B:29 , ASN B:47 , LYS B:144 , PHE B:191 , ALA B:237 , SER B:238 , GOL B:349 , HOH B:458 , HOH B:596
BINDING SITE FOR RESIDUE GOL B 353
31
DC4
SOFTWARE
HIS B:79 , GLU B:83 , ASP B:110 , ARG B:112 , HOH B:498
BINDING SITE FOR RESIDUE GOL B 354
32
DC5
SOFTWARE
LEU B:125 , ILE B:128 , LYS B:138 , HIS B:162 , HOH B:389 , HOH B:451 , HOH B:495 , HOH B:600
BINDING SITE FOR RESIDUE GOL B 355
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
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]
PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: TRANSALDOLASE_1 (A:43-51,B:43-51)
2: TRANSALDOLASE_2 (A:141-158,B:141-158)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
TRANSALDOLASE_1
PS01054
Transaldolase signature 1.
TAL2_YEAST
43-51
2
A:43-51
B:43-51
2
TRANSALDOLASE_2
PS00958
Transaldolase active site.
TAL2_YEAST
141-158
2
A:141-158
B:141-158
[
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]
Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3cq0a_ (A:)
1b: SCOP_d3cq0b_ (B:)
View:
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Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
Aldolase
(457)
Family
:
Class I aldolase
(182)
Protein domain
:
automated matches
(54)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
(1)
1a
d3cq0a_
A:
1b
d3cq0b_
B:
[
close SCOP info
]
CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_3cq0B00 (B:12-339)
1b: CATH_3cq0A00 (A:12-339)
View:
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Classes
(
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(
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(
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(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Barrel
(2994)
Topology
:
TIM Barrel
(2806)
Homologous Superfamily
:
Aldolase class I
(887)
Baker's yeast (Saccharomyces cerevisiae)
(49)
1a
3cq0B00
B:12-339
1b
3cq0A00
A:12-339
[
close CATH info
]
Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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