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Getting 'Biological Unit' information from database.
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Getting 'Exon' information from database.
3C7X
Asym. Unit
Info
Asym.Unit (43 KB)
Biol.Unit 1 (39 KB)
Biol.Unit 2 (76 KB)
Biol.Unit 3 (76 KB)
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(1)
Title
:
HEMOPEXIN-LIKE DOMAIN OF MATRIX METALLOPROTEINASE 14
Authors
:
A. Tochowicz, Y. Itoh, K. Maskos, W. Bode, P. Goettig
Date
:
08 Feb 08 (Deposition) - 10 Feb 09 (Release) - 26 Dec 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Biol. Unit 2: A (2x)
Biol. Unit 3: A (2x)
Keywords
:
Membrane Protein Interaction, Pro-Mmp-2, Timp-2, Metastasis, Cleavage On Pair Of Basic Residues, Hydrolase, Metal-Binding, Metalloprotease, Protease, Transmembrane, Zymogen
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
A. Tochowicz, P. Goettig, R. Evans, R. Visse, Y. Shitomi, R. Palmisano N. Ito, K. Richter, K. Maskos, D. Franke, D. Svergun, H. Nagase, W. Bode Y. Itoh
The Dimer Interface Of The Membrane Type 1 Matrix Metalloproteinase Hemopexin Domain: Crystal Structure And Biological Functions
J. Biol. Chem. V. 286 7587 2011
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
2a: SODIUM ION (NAa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
1
Ligand/Ion
CHLORIDE ION
2
NA
1
Ligand/Ion
SODIUM ION
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH A:56 , ASN A:369 , THR A:370 , ASP A:416 , ARG A:464
BINDING SITE FOR RESIDUE NA A 1001
2
AC2
SOFTWARE
HOH A:19 , THR A:325 , ALA A:327 , THR A:370 , ALA A:371
BINDING SITE FOR RESIDUE CL A 1002
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SAPs(SNPs)/Variants
(2, 2)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_021035 (M355I, chain A, )
2: VAR_031267 (R431H, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_021035
M
355
I
MMP14_HUMAN
Polymorphism
17880989
A
M
355
I
2
UniProt
VAR_031267
R
431
H
MMP14_HUMAN
Polymorphism
3751489
A
R
431
H
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 5)
Info
All PROSITE Patterns/Profiles
1: HEMOPEXIN_2 (A:316-364|A:365-410|A:412-460|A:46...)
2: HEMOPEXIN (A:357-372)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
HEMOPEXIN_2
PS51642
Hemopexin repeat profile.
MMP14_HUMAN
316-364
365-410
412-460
461-508
4
A:316-364
A:365-410
A:412-460
A:461-508
2
HEMOPEXIN
PS00024
Hemopexin domain signature.
MMP14_HUMAN
357-372
1
A:357-372
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Exons
(5, 5)
Info
All Exons
Exon 1.6 (A:316-337)
Exon 1.7 (A:338-384)
Exon 1.8 (A:384-434)
Exon 1.9 (A:434-473)
Exon 1.10 (A:473-511)
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All Exon Boundaries
1: Boundary 1.5/1.6
2: Boundary 1.6/1.7
3: Boundary 1.7/1.8
4: Boundary 1.8/1.9
5: Boundary 1.9/1.10
6: Boundary 1.10/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000311852
1
ENSE00001417791
chr14:
23305772-23306134
363
MMP14_HUMAN
1-36
36
0
-
-
1.2
ENST00000311852
2
ENSE00001031343
chr14:
23310700-23310848
149
MMP14_HUMAN
37-86
50
0
-
-
1.3
ENST00000311852
3
ENSE00001031341
chr14:
23311122-23311244
123
MMP14_HUMAN
86-127
42
0
-
-
1.4
ENST00000311852
4
ENSE00001031346
chr14:
23311619-23311926
308
MMP14_HUMAN
127-230
104
0
-
-
1.5
ENST00000311852
5
ENSE00001031364
chr14:
23312466-23312627
162
MMP14_HUMAN
230-284
55
0
-
-
1.6
ENST00000311852
6
ENSE00001198262
chr14:
23312919-23313079
161
MMP14_HUMAN
284-337
54
1
A:316-337
22
1.7
ENST00000311852
7
ENSE00001031362
chr14:
23313580-23313718
139
MMP14_HUMAN
338-384
47
1
A:338-384
47
1.8
ENST00000311852
8
ENSE00001031361
chr14:
23313839-23313989
151
MMP14_HUMAN
384-434
51
1
A:384-434
51
1.9
ENST00000311852
9
ENSE00001031354
chr14:
23314460-23314575
116
MMP14_HUMAN
434-473
40
1
A:434-473
40
1.10
ENST00000311852
10
ENSE00001431522
chr14:
23314917-23316970
2054
MMP14_HUMAN
473-582
110
1
A:473-511
39
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d3c7xa_ (A:)
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(
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Folds
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)
Protein Domains
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)
(
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Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
4-bladed beta-propeller
(15)
Superfamily
:
Hemopexin-like domain
(15)
Family
:
automated matches
(3)
Protein domain
:
automated matches
(3)
Human (Homo sapiens) [TaxId: 9606]
(3)
1a
d3c7xa_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_3c7xA00 (A:316-511)
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Organisms
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Class
:
Mainly Beta
(13760)
Architecture
:
4 Propellor
(14)
Topology
:
Hemopexin
(14)
Homologous Superfamily
:
Hemopexin
(14)
Human (Homo sapiens)
(10)
1a
3c7xA00
A:316-511
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Chain A
Asymmetric Unit 1
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Show PDB file:
Asym.Unit (43 KB)
Header - Asym.Unit
Biol.Unit 1 (39 KB)
Header - Biol.Unit 1
Biol.Unit 2 (76 KB)
Header - Biol.Unit 2
Biol.Unit 3 (76 KB)
Header - Biol.Unit 3
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