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3BP8
Asym. Unit
Info
Asym.Unit (146 KB)
Biol.Unit 1 (140 KB)
Biol.Unit 2 (118 KB)
Biol.Unit 3 (14 KB)
Biol.Unit 4 (14 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF MLC/EIIB COMPLEX
Authors
:
Y. J. An, H. I. Jung, S. S. Cha
Date
:
18 Dec 07 (Deposition) - 27 May 08 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.85
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Biol. Unit 2: A,B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Keywords
:
Enzyme, Iicbglc, Glucose Signaling, Mlc, Protein-Protein Interaction, Transcription Regulation, Inner Membrane, Kinase, Membrane, Phosphoprotein, Phosphotransferase System, Sugar Transport, Transferase, Transmembrane, Transport
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
T. W. Nam, H. I. Jung, Y. J. An, Y. H. Park, S. H. Lee, Y. J. Seok, S. S. Cha
Analyses Of Mlc-Iibglc Interaction And A Plausible Molecular Mechanism Of Mlc Inactivation By Membrane Sequestration
Proc. Natl. Acad. Sci. Usa V. 105 3751 2008
(for further references see the
PDB file header
)
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Hetero Components
(2, 5)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
1c: ACETATE ION (ACTc)
2a: ZINC ION (ZNa)
2b: ZINC ION (ZNb)
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No.
Name
Count
Type
Full Name
1
ACT
3
Ligand/Ion
ACETATE ION
2
ZN
2
Ligand/Ion
ZINC ION
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
LEU A:234 , HIS A:236 , THR B:230
BINDING SITE FOR RESIDUE ACT A 408
2
AC2
SOFTWARE
ASP A:349 , ASP B:251
BINDING SITE FOR RESIDUE ACT A 409
3
AC3
SOFTWARE
HIS A:247 , CYS A:257 , CYS A:259 , CYS A:264
BINDING SITE FOR RESIDUE ZN A 410
4
AC4
SOFTWARE
HIS B:247 , CYS B:257 , CYS B:259 , CYS B:264
BINDING SITE FOR RESIDUE ZN B 407
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: PTS_EIIB_TYPE_1_CYS (C:26-43,D:26-43)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PTS_EIIB_TYPE_1_CYS
PS01035
PTS EIIB domains cysteine phosphorylation site signature.
PTGCB_ECOLI
414-431
2
C:26-43
D:26-43
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(3, 8)
Info
All SCOP Domains
1a: SCOP_d3bp8a1 (A:11-81)
1b: SCOP_d3bp8b1 (B:12-81)
2a: SCOP_d3bp8c_ (C:)
2b: SCOP_d3bp8d_ (D:)
3a: SCOP_d3bp8a2 (A:82-210)
3b: SCOP_d3bp8b2 (B:82-210)
3c: SCOP_d3bp8b3 (B:211-406)
3d: SCOP_d3bp8a3 (A:211-406)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
DNA/RNA-binding 3-helical bundle
(1299)
Superfamily
:
Winged helix DNA-binding domain
(576)
Family
:
ROK associated domain
(4)
Protein domain
:
Mlc protein N-terminal domain
(2)
Escherichia coli [TaxId: 562]
(2)
1a
d3bp8a1
A:11-81
1b
d3bp8b1
B:12-81
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Homing endonuclease-like
(42)
Superfamily
:
Glucose permease domain IIB
(4)
Family
:
Glucose permease domain IIB
(4)
Protein domain
:
Glucose permease domain IIB
(4)
Escherichia coli [TaxId: 562]
(4)
2a
d3bp8c_
C:
2b
d3bp8d_
D:
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Ribonuclease H-like motif
(1424)
Superfamily
:
Actin-like ATPase domain
(426)
Family
:
ROK
(11)
Protein domain
:
Mlc protein
(2)
Escherichia coli [TaxId: 562]
(2)
3a
d3bp8a2
A:82-210
3b
d3bp8b2
B:82-210
3c
d3bp8b3
B:211-406
3d
d3bp8a3
A:211-406
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CATH Domains
(2, 6)
Info
all CATH domains
1a: CATH_3bp8C00 (C:13-87)
1b: CATH_3bp8D00 (D:13-87)
2a: CATH_3bp8B02 (B:83-209,B:379-406)
2b: CATH_3bp8A02 (A:83-209,A:379-406)
2c: CATH_3bp8A03 (A:210-378)
2d: CATH_3bp8B03 (B:210-378)
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Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Gyrase A; domain 2
(166)
Homologous Superfamily
:
[code=3.30.1360.60, no name defined]
(4)
Escherichia coli. Strain: b834(de3).
(1)
1a
3bp8C00
C:13-87
1b
3bp8D00
D:13-87
Topology
:
Nucleotidyltransferase; domain 5
(788)
Homologous Superfamily
:
[code=3.30.420.40, no name defined]
(217)
Escherichia coli. Strain: b834(de3).
(1)
2a
3bp8B02
B:83-209,B:379-406
2b
3bp8A02
A:83-209,A:379-406
2c
3bp8A03
A:210-378
2d
3bp8B03
B:210-378
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Pfam Domains
(0, 0)
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Asymmetric Unit 1
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Asym.Unit (146 KB)
Header - Asym.Unit
Biol.Unit 1 (140 KB)
Header - Biol.Unit 1
Biol.Unit 2 (118 KB)
Header - Biol.Unit 2
Biol.Unit 3 (14 KB)
Header - Biol.Unit 3
Biol.Unit 4 (14 KB)
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