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2YIN
Biol. Unit 2
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Asym.Unit (415 KB)
Biol.Unit 1 (203 KB)
Biol.Unit 2 (205 KB)
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(1)
Title
:
STRUCTURE OF THE COMPLEX BETWEEN DOCK2 AND RAC1.
Authors
:
K. A. Kulkarni, J. Yang, Z. Zhang, D. Barford
Date
:
16 May 11 (Deposition) - 25 May 11 (Release) - 27 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: B,D (1x)
Biol. Unit 2: A,C (1x)
Keywords
:
Apoptosis, Dock, Dock Guanine Nucleotide Exchange Factors, Rho Gtpase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Kulkarni, J. Yang, Z. Zhang, D. Barford
Multiple Factors Confer Specific Cdc42 And Rac Protein Activation By Dedicator Of Cytokinesis (Dock) Nucleotide Exchange Factors.
J. Biol. Chem. V. 286 25341 2011
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Hetero Components
(0, 0)
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Sites
(0, 0)
Info
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Sorry, no Info available
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SAPs(SNPs)/Variants
(11, 11)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
01: VAR_014540 (N26D, chain C, )
02: VAR_014541 (F28L, chain C, )
03: VAR_014542 (A59T, chain C, )
04: VAR_014543 (D63G, chain C, )
05: VAR_014545 (V93G, chain C, )
06: VAR_014544 (V93I, chain C, )
07: VAR_014546 (T108I, chain C, )
08: VAR_014547 (K130R, chain C, )
09: VAR_014548 (K133E, chain C, )
10: VAR_033303 (T135I, chain C, )
11: VAR_053064 (D1558A, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_014540
N
26
D
RAC1_HUMAN
Polymorphism
5830
C
N
26
D
02
UniProt
VAR_014541
F
28
L
RAC1_HUMAN
Polymorphism
5832
C
F
28
L
03
UniProt
VAR_014542
A
59
T
RAC1_HUMAN
Polymorphism
5837
C
A
59
T
04
UniProt
VAR_014543
D
63
G
RAC1_HUMAN
Polymorphism
5831
C
D
63
G
05
UniProt
VAR_014545
V
93
G
RAC1_HUMAN
Polymorphism
5826
C
V
93
G
06
UniProt
VAR_014544
V
93
I
RAC1_HUMAN
Polymorphism
5825
C
V
93
I
07
UniProt
VAR_014546
T
108
I
RAC1_HUMAN
Polymorphism
5838
C
T
108
I
08
UniProt
VAR_014547
K
130
R
RAC1_HUMAN
Polymorphism
5828
C
K
130
R
09
UniProt
VAR_014548
K
133
E
RAC1_HUMAN
Polymorphism
5835
C
K
133
E
10
UniProt
VAR_033303
T
135
I
RAC1_HUMAN
Polymorphism
11540455
C
T
135
I
11
UniProt
VAR_053064
D
1558
A
DOCK2_HUMAN
Polymorphism
13179480
A
D
1558
A
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: RHO (C:1-176)
2: DHR_2 (A:1211-1620)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RHO
PS51420
small GTPase Rho family profile.
RAC1_HUMAN
1-176
1
C:1-176
-
2
DHR_2
PS51651
DHR-2 domain profile.
DOCK2_HUMAN
1211-1622
1
A:1211-1620
-
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2yinc_ (C:)
1b: SCOP_d2yind_ (D:)
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Protein Domains
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)
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Organisms
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)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
G proteins
(693)
Protein domain
:
automated matches
(173)
Human (Homo sapiens) [TaxId: 9606]
(112)
1a
d2yinc_
C:
1b
d2yind_
D:
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CATH Domains
(0, 0)
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Pfam Domains
(2, 4)
Info
all PFAM domains
1a: PFAM_Ras_2yinD01 (D:5-177)
1b: PFAM_Ras_2yinD02 (D:5-177)
2a: PFAM_Ded_cyto_2yinB01 (B:1431-1615)
2b: PFAM_Ded_cyto_2yinB02 (B:1431-1615)
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(
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Organisms
(
)
(
)
Clan
:
P-loop_NTPase
(1112)
Family
:
Ras
(176)
Homo sapiens (Human)
(141)
1a
Ras-2yinD01
D:5-177
1b
Ras-2yinD02
D:5-177
Clan
:
no clan defined [family: Ded_cyto]
(3)
Family
:
Ded_cyto
(3)
Homo sapiens (Human)
(3)
2a
Ded_cyto-2yinB01
B:1431-1615
2b
Ded_cyto-2yinB02
B:1431-1615
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Asymmetric Unit 1
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Asym.Unit (415 KB)
Header - Asym.Unit
Biol.Unit 1 (203 KB)
Header - Biol.Unit 1
Biol.Unit 2 (205 KB)
Header - Biol.Unit 2
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