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2WYW
Asym. Unit
Info
Asym.Unit (183 KB)
Biol.Unit 1 (176 KB)
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(1)
Title
:
HIGH RESOLUTION STRUCTURE OF THERMUS THERMOPHILUS ENOYL-ACYL CARRIER PROTEIN REDUCTASE NAD AND TRICLOSAN-FORM
Authors
:
J. M. Otero, A. J. Noel, P. Guardado-Calvo, A. L. Llamas-Saiz, M. J. Van
Date
:
20 Nov 09 (Deposition) - 24 Nov 10 (Release) - 01 Apr 15 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Oxidoreductase, Fatty Acid Biosynthesis, Oxidation Reduction
(Keyword Search:
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Reference
:
J. M. Otero, A. J. Noel, P. Guardado-Calvo, A. L. Llamas-Saiz, W. Wende B. Schierling, A. Pingoud, M. J. Van Raaij
High-Resolution Structures Of Thermus Thermophilus Enoyl- Acyl Carrier Protein Reductase In The Apo Form, In Complex With Nad(+) And In Complex With Nad(+) And Triclosan.
Acta Crystallogr. , Sect. F V. 68 1139 2012
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Hetero Components
(2, 8)
Info
All Hetero Components
1a: NICOTINAMIDE-ADENINE-DINUCLEOTIDE (NADa)
1b: NICOTINAMIDE-ADENINE-DINUCLEOTIDE (NADb)
1c: NICOTINAMIDE-ADENINE-DINUCLEOTIDE (NADc)
1d: NICOTINAMIDE-ADENINE-DINUCLEOTIDE (NADd)
2a: TRICLOSAN (TCLa)
2b: TRICLOSAN (TCLb)
2c: TRICLOSAN (TCLc)
2d: TRICLOSAN (TCLd)
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Label:
No.
Name
Count
Type
Full Name
1
NAD
4
Ligand/Ion
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
2
TCL
4
Ligand/Ion
TRICLOSAN
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY D:15 , VAL D:16 , THR D:17 , SER D:21 , LEU D:22 , GLN D:42 , ALA D:65 , ASP D:66 , VAL D:67 , ALA D:93 , ILE D:94 , ALA D:95 , VAL D:120 , LEU D:145 , THR D:146 , LYS D:164 , ALA D:190 , GLY D:191 , PRO D:192 , VAL D:193 , THR D:195 , ALA D:197 , TCL D:1260 , HOH D:2007 , HOH D:2129 , HOH D:2130 , HOH D:2131 , HOH D:2132 , HOH D:2133 , HOH D:2135
BINDING SITE FOR RESIDUE NAD D1259
2
AC2
SOFTWARE
ALA D:95 , ALA D:97 , TYR D:157 , MET D:160 , ALA D:197 , ALA D:198 , SER D:200 , ILE D:201 , NAD D:1259
BINDING SITE FOR RESIDUE TCL D1260
3
AC3
SOFTWARE
GLY C:15 , VAL C:16 , THR C:17 , SER C:21 , LEU C:22 , GLN C:42 , LEU C:46 , ALA C:65 , ASP C:66 , VAL C:67 , ALA C:93 , ILE C:94 , ALA C:95 , PHE C:96 , VAL C:120 , LEU C:145 , THR C:146 , LYS C:164 , ALA C:190 , GLY C:191 , PRO C:192 , VAL C:193 , THR C:195 , VAL C:196 , ALA C:197 , TCL C:1260 , HOH C:2013 , HOH C:2085 , HOH C:2132 , HOH C:2170 , HOH C:2171 , HOH C:2173 , HOH C:2174
BINDING SITE FOR RESIDUE NAD C1259
4
AC4
SOFTWARE
ALA C:95 , ALA C:97 , TYR C:157 , ALA C:197 , SER C:200 , ILE C:201 , NAD C:1259
BINDING SITE FOR RESIDUE TCL C1260
5
AC5
SOFTWARE
GLY B:15 , VAL B:16 , THR B:17 , SER B:21 , LEU B:22 , GLN B:42 , ALA B:65 , ASP B:66 , VAL B:67 , ALA B:93 , ILE B:94 , ALA B:95 , VAL B:120 , LEU B:145 , THR B:146 , LYS B:164 , ALA B:190 , GLY B:191 , PRO B:192 , VAL B:193 , THR B:195 , ALA B:197 , TCL B:1260 , HOH B:2011 , HOH B:2012 , HOH B:2014 , HOH B:2159 , HOH B:2160 , HOH B:2161 , HOH B:2162
BINDING SITE FOR RESIDUE NAD B1259
6
AC6
SOFTWARE
ALA B:95 , ALA B:97 , TYR B:157 , ALA B:197 , ILE B:201 , NAD B:1259
BINDING SITE FOR RESIDUE TCL B1260
7
AC7
SOFTWARE
GLY A:15 , VAL A:16 , THR A:17 , SER A:21 , LEU A:22 , GLN A:42 , ALA A:65 , ASP A:66 , VAL A:67 , ALA A:93 , ILE A:94 , ALA A:95 , VAL A:120 , LEU A:145 , THR A:146 , LYS A:164 , ALA A:190 , GLY A:191 , PRO A:192 , VAL A:193 , THR A:195 , ALA A:197 , TCL A:1261 , HOH A:2008 , HOH A:2097 , HOH A:2200 , HOH A:2201 , HOH A:2202 , HOH A:2203 , HOH A:2204
BINDING SITE FOR RESIDUE NAD A1260
8
AC8
SOFTWARE
ALA A:95 , ALA A:97 , TYR A:157 , ALA A:197 , ILE A:201 , MET A:207 , NAD A:1260
BINDING SITE FOR RESIDUE TCL A1261
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d2wywa_ (A:)
1b: SCOP_d2wywb_ (B:)
1c: SCOP_d2wywc_ (C:)
1d: SCOP_d2wywd_ (D:)
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Protein Domains
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Organisms
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
NAD(P)-binding Rossmann-fold domains
(1604)
Superfamily
:
NAD(P)-binding Rossmann-fold domains
(1604)
Family
:
Tyrosine-dependent oxidoreductases
(503)
Protein domain
:
automated matches
(114)
Thermus thermophilus HB8 [TaxId: 300852]
(4)
1a
d2wywa_
A:
1b
d2wywb_
B:
1c
d2wywc_
C:
1d
d2wywd_
D:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_adh_short_C2_2wywD01 (D:15-253)
1b: PFAM_adh_short_C2_2wywD02 (D:15-253)
1c: PFAM_adh_short_C2_2wywD03 (D:15-253)
1d: PFAM_adh_short_C2_2wywD04 (D:15-253)
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Clan
:
NADP_Rossmann
(1239)
Family
:
adh_short_C2
(98)
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
(7)
1a
adh_short_C2-2wywD01
D:15-253
1b
adh_short_C2-2wywD02
D:15-253
1c
adh_short_C2-2wywD03
D:15-253
1d
adh_short_C2-2wywD04
D:15-253
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Asymmetric Unit 1
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Asym.Unit (183 KB)
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