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Asym. Unit
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Asym.Unit (50 KB)
Biol.Unit 1 (43 KB)
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(1)
Title
:
CRYSTALLOGRAPHIC ANALYSIS OF COUNTER-ION EFFECTS ON SUBTILISIN ENZYMATIC ACTION IN ACETONITRILE
Authors
:
M. Cianci, B. Tomaszewki, J. R. Helliwell, P. J. Halling
Date
:
09 Oct 09 (Deposition) - 08 Dec 10 (Release) - 08 Dec 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.24
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Serine Protease, Metal-Binding, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Cianci, B. Tomaszewski, J. R. Helliwell, P. J. Halling
Crystallographic Analysis Of Counterion Effects On Subtilisin Enzymatic Action In Acetonitrile.
J. Am. Chem. Soc. V. 132 2293 2010
[
close entry info
]
Hetero Components
(5, 26)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
2a: ACETONITRILE (CCNa)
2b: ACETONITRILE (CCNb)
2c: ACETONITRILE (CCNc)
2d: ACETONITRILE (CCNd)
2e: ACETONITRILE (CCNe)
3a: CHLORIDE ION (CLa)
3b: CHLORIDE ION (CLb)
3c: CHLORIDE ION (CLc)
3d: CHLORIDE ION (CLd)
3e: CHLORIDE ION (CLe)
3f: CHLORIDE ION (CLf)
3g: CHLORIDE ION (CLg)
3h: CHLORIDE ION (CLh)
4a: CESIUM ION (CSa)
4b: CESIUM ION (CSb)
4c: CESIUM ION (CSc)
4d: CESIUM ION (CSd)
4e: CESIUM ION (CSe)
4f: CESIUM ION (CSf)
4g: CESIUM ION (CSg)
4h: CESIUM ION (CSh)
4i: CESIUM ION (CSi)
4j: CESIUM ION (CSj)
4k: CESIUM ION (CSk)
5a: SODIUM ION (NAa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
1
Ligand/Ion
CALCIUM ION
2
CCN
5
Ligand/Ion
ACETONITRILE
3
CL
8
Ligand/Ion
CHLORIDE ION
4
CS
11
Ligand/Ion
CESIUM ION
5
NA
1
Ligand/Ion
SODIUM ION
[
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Sites
(26, 26)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLN A:2 , SER A:184 , ASN A:185 , LEU A:257 , TYR A:263
BINDING SITE FOR RESIDUE CL A1276
02
AC2
SOFTWARE
ASN A:97 , ALA A:254 , LYS A:265
BINDING SITE FOR RESIDUE CL A1277
03
AC3
SOFTWARE
ASN A:240 , SER A:242 , GLN A:245
BINDING SITE FOR RESIDUE CL A1278
04
AC4
SOFTWARE
LYS A:170
BINDING SITE FOR RESIDUE CL A1301
05
AC5
SOFTWARE
ASN A:158 , CS A:1292
BINDING SITE FOR RESIDUE CL A1279
06
AC6
SOFTWARE
TYR A:6 , TYR A:256
BINDING SITE FOR RESIDUE CL A1280
07
AC7
SOFTWARE
SER A:99 , ASN A:248
BINDING SITE FOR RESIDUE CL A1281
08
AC8
SOFTWARE
PRO A:40 , LEU A:42 , LEU A:75 , CS A:1283
BINDING SITE FOR RESIDUE CL A1282
09
AC9
SOFTWARE
ALA A:37 , HIS A:39 , LEU A:42 , CL A:1282
BINDING SITE FOR RESIDUE CS A1283
10
BC1
SOFTWARE
GLY A:193 , ALA A:194 , LEU A:196 , SER A:260
BINDING SITE FOR RESIDUE CS A1284
11
BC2
SOFTWARE
GLY A:61 , SER A:98 , HOH A:2041
BINDING SITE FOR RESIDUE CS A1285
12
BC3
SOFTWARE
GLN A:2 , ASN A:77 , ASN A:185
BINDING SITE FOR RESIDUE CS A1286
13
BC4
SOFTWARE
ALA A:52 , TYR A:256 , CCN A:1299
BINDING SITE FOR RESIDUE CS A1287
14
BC5
SOFTWARE
TYR A:143 , SER A:244 , HOH A:2101
BINDING SITE FOR RESIDUE CS A1288
15
BC6
SOFTWARE
PRO A:239 , LEU A:241 , HOH A:2052
BINDING SITE FOR RESIDUE CS A1289
16
BC7
SOFTWARE
ALA A:254 , HOH A:2040
BINDING SITE FOR RESIDUE CS A1290
17
BC8
SOFTWARE
ALA A:1 , THR A:3 , GLY A:80 , HOH A:2086
BINDING SITE FOR RESIDUE CS A1291
18
BC9
SOFTWARE
SER A:156 , ASN A:158 , CL A:1279
BINDING SITE FOR RESIDUE CS A1292
19
CC1
SOFTWARE
SER A:182 , ASN A:183
BINDING SITE FOR RESIDUE CS A1293
20
CC2
SOFTWARE
GLN A:2 , ASP A:41 , LEU A:75 , ASN A:77 , THR A:79 , VAL A:81
BINDING SITE FOR RESIDUE CA A1294
21
CC3
SOFTWARE
ALA A:169 , TYR A:171 , VAL A:174 , HOH A:2070 , HOH A:2083
BINDING SITE FOR RESIDUE NA A1295
22
CC4
SOFTWARE
GLY A:127 , GLY A:154 , SER A:221 , CCN A:1297 , HOH A:2065
BINDING SITE FOR RESIDUE CCN A1296
23
CC5
SOFTWARE
ASN A:155 , GLY A:219 , THR A:220 , SER A:221 , CCN A:1296 , HOH A:2095
BINDING SITE FOR RESIDUE CCN A1297
24
CC6
SOFTWARE
ASN A:62 , ASN A:117 , HOH A:2110
BINDING SITE FOR RESIDUE CCN A1298
25
CC7
SOFTWARE
VAL A:51 , ALA A:52 , TYR A:256 , CS A:1287 , HOH A:2040 , HOH A:2111 , HOH A:2112
BINDING SITE FOR RESIDUE CCN A1299
26
CC8
SOFTWARE
SER A:101 , GLY A:102 , GLY A:127 , HOH A:2055 , HOH A:2113
BINDING SITE FOR RESIDUE CCN A1300
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Label:
Sorry, no Info available
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PROSITE Patterns/Profiles
(3, 3)
Info
All PROSITE Patterns/Profiles
1: SUBTILASE_ASP (A:28-39)
2: SUBTILASE_HIS (A:64-74)
3: SUBTILASE_SER (A:219-229)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SUBTILASE_ASP
PS00136
Serine proteases, subtilase family, aspartic acid active site.
SUBT_BACLI
133-144
1
A:28-39
2
SUBTILASE_HIS
PS00137
Serine proteases, subtilase family, histidine active site.
SUBT_BACLI
168-178
1
A:64-74
3
SUBTILASE_SER
PS00138
Serine proteases, subtilase family, serine active site.
SUBT_BACLI
323-333
1
A:219-229
[
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]
Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2wuva_ (A:)
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Protein Domains
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)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Subtilisin-like
(227)
Superfamily
:
Subtilisin-like
(227)
Family
:
Subtilases
(190)
Protein domain
:
automated matches
(58)
Bacillus licheniformis [TaxId: 1402]
(6)
1a
d2wuva_
A:
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CATH Domains
(0, 0)
Info
all CATH domains
View:
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Sorry, no Info available
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_Peptidase_S8_2wuvA01 (A:27-275)
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Clans
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(
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(
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Organisms
(
)
(
)
Clan
:
no clan defined [family: Peptidase_S8]
(104)
Family
:
Peptidase_S8
(104)
Bacillus licheniformis
(13)
1a
Peptidase_S8-2wuvA01
A:27-275
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Asymmetric Unit 1
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