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2WIU
Biol. Unit 1
Info
Asym.Unit (171 KB)
Biol.Unit 1 (164 KB)
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(1)
Title
:
MERCURY-MODIFIED BACTERIAL PERSISTENCE REGULATOR HIPBA
Authors
:
A. Evdokimov, I. Voznesensky, K. Fennell, M. Anderson, J. F. Smith, D. A. Fisher
Date
:
17 May 09 (Deposition) - 28 Jul 09 (Release) - 04 Apr 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.35
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Transferase Transcription Complex, Serine Kinase, Dna-Binding, Mercury Derivative, Repressor, Transcription Regulation, Sad
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
A. Evdokimov, I. Voznesensky, K. Fennell, M. Anderson, J. F. Smith, D. A. Fisher
New Kinase Regulation Mechanism Found In Hipba: A Bacterial Persistence Switch.
Acta Crystallogr. , Sect. D V. 65 875 2009
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Hetero Components
(0, 0)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
1e: CHLORIDE ION (CLe)
1f: CHLORIDE ION (CLf)
1g: CHLORIDE ION (CLg)
1h: CHLORIDE ION (CLh)
1i: CHLORIDE ION (CLi)
1j: CHLORIDE ION (CLj)
2a: MERCURY (II) ION (HGa)
2b: MERCURY (II) ION (HGb)
2c: MERCURY (II) ION (HGc)
2d: MERCURY (II) ION (HGd)
2e: MERCURY (II) ION (HGe)
2f: MERCURY (II) ION (HGf)
2g: MERCURY (II) ION (HGg)
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Sites
(13, 13)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TRP A:117 , CYS A:168
BINDING SITE FOR RESIDUE HG A1438
02
AC2
SOFTWARE
CYS A:256 , PRO A:262 , LYS A:266
BINDING SITE FOR RESIDUE HG A1439
03
AC3
SOFTWARE
CYS C:168
BINDING SITE FOR RESIDUE HG C1438
04
AC4
SOFTWARE
CYS C:168
BINDING SITE FOR RESIDUE HG C1439
05
AC5
SOFTWARE
CYS C:256
BINDING SITE FOR RESIDUE HG C1440
06
AC6
SOFTWARE
THR B:69 , LEU B:70 , CYS B:71 , CL B:1089
BINDING SITE FOR RESIDUE HG B1087
07
AC7
SOFTWARE
THR D:69 , CYS D:71 , CL D:1088
BINDING SITE FOR RESIDUE HG D1087
08
AC8
SOFTWARE
LYS A:363 , ALA A:365
BINDING SITE FOR RESIDUE CL A1440
09
AC9
SOFTWARE
ARG A:372 , HIS A:373
BINDING SITE FOR RESIDUE CL A1441
10
BC1
SOFTWARE
GLY C:274
BINDING SITE FOR RESIDUE CL C1441
11
BC2
SOFTWARE
HG B:1087
BINDING SITE FOR RESIDUE CL B1089
12
BC3
SOFTWARE
CYS D:71 , HG D:1087
BINDING SITE FOR RESIDUE CL D1088
13
BC4
SOFTWARE
GLY A:274 , ARG A:277
BINDING SITE FOR RESIDUE CL A1442
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: HTH_CROC1 (B:17-71,D:17-71)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
HTH_CROC1
PS50943
Cro/C1-type HTH domain profile.
HIPB_ECOLI
17-71
2
B:17-71
D:17-71
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Exons
(0, 0)
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All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(0, 0)
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CATH Domains
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all CATH domains
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Pfam Domains
(4, 8)
Info
all PFAM domains
1a: PFAM_HTH_3_2wiuD01 (D:17-70)
1b: PFAM_HTH_3_2wiuD02 (D:17-70)
2a: PFAM_Couple_hipA_2wiuC01 (C:4-104)
2b: PFAM_Couple_hipA_2wiuC02 (C:4-104)
3a: PFAM_HipA_C_2wiuC03 (C:249-332)
3b: PFAM_HipA_C_2wiuC04 (C:249-332)
4a: PFAM_HipA_N_2wiuC05 (C:150-238)
4b: PFAM_HipA_N_2wiuC06 (C:150-238)
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Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
HTH
(544)
Family
:
HTH_3
(27)
Escherichia coli (strain K12)
(1)
1a
HTH_3-2wiuD01
D:17-70
1b
HTH_3-2wiuD02
D:17-70
Clan
:
no clan defined [family: Couple_hipA]
(1)
Family
:
Couple_hipA
(1)
Escherichia coli (strain K12)
(1)
2a
Couple_hipA-2wiuC01
C:4-104
2b
Couple_hipA-2wiuC02
C:4-104
Clan
:
no clan defined [family: HipA_C]
(1)
Family
:
HipA_C
(1)
Escherichia coli (strain K12)
(1)
3a
HipA_C-2wiuC03
C:249-332
3b
HipA_C-2wiuC04
C:249-332
Clan
:
no clan defined [family: HipA_N]
(1)
Family
:
HipA_N
(1)
Escherichia coli (strain K12)
(1)
4a
HipA_N-2wiuC05
C:150-238
4b
HipA_N-2wiuC06
C:150-238
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Asymmetric Unit 1
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