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2WIE
Biol. Unit 1
Info
Asym.Unit (137 KB)
Biol.Unit 1 (383 KB)
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(1)
Title
:
HIGH-RESOLUTION STRUCTURE OF THE ROTOR RING FROM A PROTON DEPENDENT ATP SYNTHASE
Authors
:
D. Pogoryelov, O. Yildiz, J. D. Faraldo-Gomez, T. Meier
Date
:
11 May 09 (Deposition) - 29 Sep 09 (Release) - 11 May 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.13
Chains
:
Asym. Unit : A,B,C,D,E
Biol. Unit 1: A,B,C,D,E (3x)
Keywords
:
Hydrolase, F1Fo Atp Synthase Rotor, Ion Proton-Translocation, Ion Transport, Transmembrane, C-Ring Structure, Spirulina Platensis, Hydrogen Ion Transport, Membrane Protein Complex, Cf(0), Membrane, Lipid-Binding
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. Pogoryelov, O. Yildiz, J. D. Faraldo-Gomez, T. Meier
High-Resolution Structure Of The Rotor Ring Of A Proton-Dependent Atp Synthase.
Nat. Struct. Mol. Biol. V. 16 1068 2009
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Hetero Components
(2, 135)
Info
All Hetero Components
1a: CYMAL-4 (CVMa)
1aa: CYMAL-4 (CVMaa)
1ab: CYMAL-4 (CVMab)
1ac: CYMAL-4 (CVMac)
1ad: CYMAL-4 (CVMad)
1ae: CYMAL-4 (CVMae)
1af: CYMAL-4 (CVMaf)
1ag: CYMAL-4 (CVMag)
1ah: CYMAL-4 (CVMah)
1ai: CYMAL-4 (CVMai)
1aj: CYMAL-4 (CVMaj)
1ak: CYMAL-4 (CVMak)
1al: CYMAL-4 (CVMal)
1am: CYMAL-4 (CVMam)
1an: CYMAL-4 (CVMan)
1b: CYMAL-4 (CVMb)
1c: CYMAL-4 (CVMc)
1d: CYMAL-4 (CVMd)
1e: CYMAL-4 (CVMe)
1f: CYMAL-4 (CVMf)
1g: CYMAL-4 (CVMg)
1h: CYMAL-4 (CVMh)
1i: CYMAL-4 (CVMi)
1j: CYMAL-4 (CVMj)
1k: CYMAL-4 (CVMk)
1l: CYMAL-4 (CVMl)
1m: CYMAL-4 (CVMm)
1n: CYMAL-4 (CVMn)
1o: CYMAL-4 (CVMo)
1p: CYMAL-4 (CVMp)
1q: CYMAL-4 (CVMq)
1r: CYMAL-4 (CVMr)
1s: CYMAL-4 (CVMs)
1t: CYMAL-4 (CVMt)
1u: CYMAL-4 (CVMu)
1v: CYMAL-4 (CVMv)
1w: CYMAL-4 (CVMw)
1x: CYMAL-4 (CVMx)
1y: CYMAL-4 (CVMy)
1z: CYMAL-4 (CVMz)
2a: N-FORMYLMETHIONINE (FMEa)
2b: N-FORMYLMETHIONINE (FMEb)
2c: N-FORMYLMETHIONINE (FMEc)
2d: N-FORMYLMETHIONINE (FMEd)
2e: N-FORMYLMETHIONINE (FMEe)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CVM
120
Ligand/Ion
CYMAL-4
2
FME
15
Mod. Amino Acid
N-FORMYLMETHIONINE
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Sites
(35, 35)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
SER A:3 , ASN A:4 , LEU A:5 , HOH A:2028 , LEU B:5 , CVM B:102 , CVM E:102
BINDING SITE FOR RESIDUE CVM A 102
02
AC2
SOFTWARE
ALA A:63 , CVM A:104
BINDING SITE FOR RESIDUE CVM A 103
03
AC3
SOFTWARE
ALA A:63 , CVM A:103
BINDING SITE FOR RESIDUE CVM A 104
04
AC4
SOFTWARE
ILE A:66
BINDING SITE FOR RESIDUE CVM A 106
05
AC5
SOFTWARE
VAL A:70
BINDING SITE FOR RESIDUE CVM A 108
06
AC6
SOFTWARE
VAL A:74
BINDING SITE FOR RESIDUE CVM A 109
07
AC7
SOFTWARE
CVM A:102 , FME B:1 , ALA B:9 , LEU C:5 , CVM C:102
BINDING SITE FOR RESIDUE CVM B 102
08
AC8
SOFTWARE
FME B:1 , SER B:3 , CVM B:102 , ASN C:4 , LEU C:5 , LEU D:5 , CVM D:102
BINDING SITE FOR RESIDUE CVM C 102
09
AC9
SOFTWARE
TYR B:67
BINDING SITE FOR RESIDUE CVM A 107
10
BC1
SOFTWARE
GLU A:62 , ALA B:59 , ALA B:63
BINDING SITE FOR RESIDUE CVM B 103
11
BC2
SOFTWARE
ILE B:66
BINDING SITE FOR RESIDUE CVM B 104
12
BC3
SOFTWARE
ALA B:59 , GLU B:62
BINDING SITE FOR RESIDUE CVM B 108
13
BC4
SOFTWARE
LEU B:73 , CVM B:107
BINDING SITE FOR RESIDUE CVM B 109
14
BC5
SOFTWARE
ALA C:63
BINDING SITE FOR RESIDUE CVM C 103
15
BC6
SOFTWARE
CVM B:109 , CVM B:110 , TYR C:67
BINDING SITE FOR RESIDUE CVM B 107
16
BC7
SOFTWARE
CVM B:107 , CVM C:104
BINDING SITE FOR RESIDUE CVM B 110
17
BC8
SOFTWARE
ILE C:66
BINDING SITE FOR RESIDUE CVM C 106
18
BC9
SOFTWARE
LEU C:69 , LEU C:73 , CVM C:107
BINDING SITE FOR RESIDUE CVM C 108
19
CC1
SOFTWARE
LEU C:73
BINDING SITE FOR RESIDUE CVM C 109
20
CC2
SOFTWARE
ILE C:66 , CVM C:108
BINDING SITE FOR RESIDUE CVM C 107
21
CC3
SOFTWARE
CVM C:102 , ASN D:4 , LEU D:5 , ALA D:8 , ALA D:9 , HOH D:2025 , LEU E:5 , CVM E:102
BINDING SITE FOR RESIDUE CVM D 102
22
CC4
SOFTWARE
GLU C:62 , ALA D:63
BINDING SITE FOR RESIDUE CVM D 103
23
CC5
SOFTWARE
ILE D:66
BINDING SITE FOR RESIDUE CVM D 104
24
CC6
SOFTWARE
VAL D:70 , CVM E:103
BINDING SITE FOR RESIDUE CVM D 108
25
CC7
SOFTWARE
LEU D:73
BINDING SITE FOR RESIDUE CVM D 109
26
CC8
SOFTWARE
LEU A:5 , CVM A:102 , HOH A:2028 , CVM D:102 , ASN E:4 , LEU E:5
BINDING SITE FOR RESIDUE CVM E 102
27
CC9
SOFTWARE
ALA E:63 , CVM E:103
BINDING SITE FOR RESIDUE CVM D 107
28
DC1
SOFTWARE
ILE E:66 , TYR E:67
BINDING SITE FOR RESIDUE CVM E 104
29
DC2
SOFTWARE
ALA E:59
BINDING SITE FOR RESIDUE CVM E 106
30
DC3
SOFTWARE
CVM E:107
BINDING SITE FOR RESIDUE CVM E 108
31
DC4
SOFTWARE
CVM D:107 , CVM D:108 , CVM D:110 , TYR E:67
BINDING SITE FOR RESIDUE CVM E 103
32
DC5
SOFTWARE
CVM E:108
BINDING SITE FOR RESIDUE CVM E 107
33
DC6
SOFTWARE
LEU A:69
BINDING SITE FOR RESIDUE CVM A 110
34
DC7
SOFTWARE
CVM B:110
BINDING SITE FOR RESIDUE CVM C 104
35
DC8
SOFTWARE
LEU D:69 , CVM E:103
BINDING SITE FOR RESIDUE CVM D 110
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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PROSITE Patterns/Profiles
(, 0)
Info
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(0, 0)
Info
All SCOP Domains
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Sorry, no Info available
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CATH Domains
(1, 5)
Info
all CATH domains
1a: CATH_2wieA01 (A:2-79)
1b: CATH_2wieB01 (B:2-79)
1c: CATH_2wieC01 (C:2-79)
1d: CATH_2wieD01 (D:2-79)
1e: CATH_2wieE01 (E:2-79)
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Organisms
(
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)
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
F1FO ATP Synthase
(13)
Homologous Superfamily
:
F1FO ATP Synthase
(13)
Arthrospira platensis. Organism_taxid: 118562
(1)
1a
2wieA01
A:2-79
1b
2wieB01
B:2-79
1c
2wieC01
C:2-79
1d
2wieD01
D:2-79
1e
2wieE01
E:2-79
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Asymmetric Unit 1
Asymmetric Unit 2
Asymmetric Unit 3
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select residue range 5 to 10 in chain 'A'
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