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2VVM
Biol. Unit 1
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Asym.Unit (177 KB)
Biol.Unit 1 (170 KB)
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(1)
Title
:
THE STRUCTURE OF MAO-N-D5, A VARIANT OF MONOAMINE OXIDASE FROM ASPERGILLUS NIGER.
Authors
:
K. E. Atkin, S. Hart, J. P. Turkenburg, A. M. Brzozowski, G. J. Grogan
Date
:
10 Jun 08 (Deposition) - 04 Nov 08 (Release) - 23 Dec 08 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.85
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Monoamine Oxidase, Aspergillus Niger, Fad, Peroxisome, Flavoprotein, Oxidoreductase, Enantioselectivity, Directed Evolution Variant
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. E. Atkin, R. Reiss, V. Koehler, K. R. Bailey, S. Hart, J. P. Turkenburg, N. J. Turner, A. M. Brzozowski, G. J. Grogan
The Structure Of Monoamine Oxidase From Aspergillus Niger Provides A Molecular Context For Improvements In Activity Obtained By Directed Evolution.
J. Mol. Biol. V. 384 1218 2008
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Hetero Components
(3, 10)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
1e: 1,2-ETHANEDIOL (EDOe)
1f: 1,2-ETHANEDIOL (EDOf)
2a: FLAVIN-ADENINE DINUCLEOTIDE (FADa)
2b: FLAVIN-ADENINE DINUCLEOTIDE (FADb)
3a: PROLINE (PROa)
3b: PROLINE (PROb)
View:
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Label:
No.
Name
Count
Type
Full Name
1
EDO
6
Ligand/Ion
1,2-ETHANEDIOL
2
FAD
2
Ligand/Ion
FLAVIN-ADENINE DINUCLEOTIDE
3
PRO
2
Mod. Amino Acid
PROLINE
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Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ILE A:45 , GLY A:46 , GLY A:48 , TYR A:49 , CYS A:50 , GLU A:69 , ALA A:70 , ARG A:71 , GLY A:76 , ARG A:77 , GLY A:91 , GLY A:92 , THR A:93 , TRP A:94 , PRO A:278 , VAL A:279 , THR A:307 , PRO A:309 , TRP A:420 , PHE A:425 , ALA A:429 , TRP A:430 , ASN A:456 , SER A:457 , SER A:465 , PHE A:466 , ILE A:467 , ALA A:470 , PRO A:601 , EDO A:602 , HOH A:2030 , HOH A:2222 , HOH A:2227 , HOH A:2323 , HOH A:2346 , HOH A:2355 , HOH A:2356
BINDING SITE FOR RESIDUE FAD A 600
02
AC2
SOFTWARE
TRP A:230 , TRP A:430 , SER A:465 , PHE A:466 , FAD A:600 , PRO A:601 , HOH A:2357
BINDING SITE FOR RESIDUE EDO A 602
03
AC3
SOFTWARE
PHE A:170 , ASP A:173 , TYR A:176 , HIS B:112 , ASN B:113 , ALA B:114 , LEU B:115 , HOH B:2078
BINDING SITE FOR RESIDUE EDO A 603
04
AC4
SOFTWARE
HIS A:112 , ASN A:113 , ALA A:114 , LEU A:115 , LYS A:251 , HOH A:2070 , PHE B:170 , ASP B:173 , TYR B:176
BINDING SITE FOR RESIDUE EDO A 604
05
AC5
SOFTWARE
ILE B:45 , GLY B:46 , GLY B:48 , TYR B:49 , CYS B:50 , GLU B:69 , ALA B:70 , ARG B:71 , GLY B:76 , ARG B:77 , GLY B:91 , GLY B:92 , THR B:93 , TRP B:94 , PRO B:278 , VAL B:279 , THR B:307 , PRO B:309 , TRP B:420 , PHE B:425 , ALA B:429 , TRP B:430 , ASN B:456 , SER B:457 , SER B:465 , PHE B:466 , ILE B:467 , ALA B:470 , PRO B:601 , EDO B:602 , HOH B:2040 , HOH B:2041 , HOH B:2231 , HOH B:2236 , HOH B:2310 , HOH B:2334 , HOH B:2345
BINDING SITE FOR RESIDUE FAD B 600
06
AC6
SOFTWARE
TRP B:230 , TRP B:430 , SER B:465 , PHE B:466 , FAD B:600 , PRO B:601 , HOH B:2346
BINDING SITE FOR RESIDUE EDO B 602
07
AC7
SOFTWARE
GLU A:393 , ASN B:120 , ARG B:123 , ARG B:351 , THR B:371 , HOH B:2347 , HOH B:2348
BINDING SITE FOR RESIDUE EDO B 603
08
AC8
SOFTWARE
ARG A:104 , HOH A:2061 , ARG B:56 , ASP B:57 , ARG B:104 , ARG B:108
BINDING SITE FOR RESIDUE EDO B 604
09
AC9
SOFTWARE
TRP A:94 , LEU A:213 , LEU A:245 , LYS A:340 , PHE A:382 , TRP A:430 , FAD A:600 , EDO A:602
BINDING SITE FOR RESIDUE PRO A 601
10
BC1
SOFTWARE
TRP B:94 , LEU B:245 , LYS B:340 , PHE B:382 , TRP B:430 , FAD B:600 , EDO B:602
BINDING SITE FOR RESIDUE PRO B 601
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(0, 0)
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CATH Domains
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all CATH domains
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Sorry, no Info available
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_Amino_oxidase_2vvmB01 (B:49-482)
1b: PFAM_Amino_oxidase_2vvmB02 (B:49-482)
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Clan
:
NADP_Rossmann
(1239)
Family
:
Amino_oxidase
(60)
Aspergillus niger
(2)
1a
Amino_oxidase-2vvmB01
B:49-482
1b
Amino_oxidase-2vvmB02
B:49-482
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Asymmetric Unit 1
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Asym.Unit (177 KB)
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