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Asym. Unit
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Asym.Unit (54 KB)
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(1)
Title
:
SOLUTION NMR STRUCTURE OF THE HUMAN ETS1/DNA COMPLEX, RESTRAINED REGULARIZED MEAN STRUCTURE
Authors
:
G. M. Clore, M. H. Werner, A. M. Gronenborn
Date
:
05 Aug 96 (Deposition) - 12 Mar 97 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A,B,C
Keywords
:
Complex (Dna-Binding Protein/Dna), Proto-Oncogene, Dna- Binding, Nuclear Protein, Phosphorylation, Dna Binding Protein/Dna Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. H. Werner, G. M. Clore, C. L. Fisher, R. J. Fisher, L. Trinh, J. Shiloach, A. M. Gronenborn
Correction Of The Nmr Structure Of The Ets1/Dna Complex.
J. Biomol. Nmr V. 10 317 1997
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sorry, no Info available
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(3, 3)
Info
All PROSITE Patterns/Profiles
1: ETS_DOMAIN_3 (A:25-105)
2: ETS_DOMAIN_1 (A:27-35)
3: ETS_DOMAIN_2 (A:71-86)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ETS_DOMAIN_3
PS50061
Ets-domain profile.
ETS1_HUMAN
335-415
1
A:25-105
2
ETS_DOMAIN_1
PS00345
Ets-domain signature 1.
ETS1_HUMAN
337-345
1
A:27-35
3
ETS_DOMAIN_2
PS00346
Ets-domain signature 2.
ETS1_HUMAN
381-396
1
A:71-86
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Exons
(3, 3)
Info
All Exons
Exon 1.11b (A:10-21)
Exon 1.12b (A:21-60)
Exon 1.13c (A:61-105)
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All Exon Boundaries
1: Boundary 1.10a/1.11b
2: Boundary 1.11b/1.12b
3: Boundary 1.12b/1.13c
4: Boundary 1.13c/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.6b
ENST00000319397
6b
ENSE00002154831
chr11:
128392199-128391808
392
ETS1_HUMAN
1-28
28
0
-
-
1.7
ENST00000319397
7
ENSE00000917328
chr11:
128360471-128360352
120
ETS1_HUMAN
28-68
41
0
-
-
1.8
ENST00000319397
8
ENSE00000917327
chr11:
128359385-128359185
201
ETS1_HUMAN
68-135
68
0
-
-
1.9
ENST00000319397
9
ENSE00000917326
chr11:
128356041-128355964
78
ETS1_HUMAN
135-161
27
0
-
-
1.10a
ENST00000319397
10a
ENSE00000917325
chr11:
128354966-128354718
249
ETS1_HUMAN
161-244
84
0
-
-
1.11b
ENST00000319397
11b
ENSE00000917324
chr11:
128350346-128350086
261
ETS1_HUMAN
244-331
88
1
A:10-21
12
1.12b
ENST00000319397
12b
ENSE00000917323
chr11:
128333522-128333404
119
ETS1_HUMAN
331-370
40
1
A:21-60
40
1.13c
ENST00000319397
13c
ENSE00002159982
chr11:
128332471-128331745
727
ETS1_HUMAN
371-441
71
1
A:61-105
45
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SCOP Domains
(1, 1)
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1a: SCOP_d2stwa_ (A:)
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Class
:
All alpha proteins
(14657)
Fold
:
DNA/RNA-binding 3-helical bundle
(1299)
Superfamily
:
Winged helix DNA-binding domain
(576)
Family
:
ets domain
(23)
Protein domain
:
ETS-1 transcription factor, residues 331-440
(9)
Human (Homo sapiens) [TaxId: 9606]
(3)
1a
d2stwa_
A:
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_2stwA00 (A:10-105)
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Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Arc Repressor Mutant, subunit A
(1030)
Homologous Superfamily
:
'winged helix' repressor DNA binding domain
(507)
[unclassified]
(77)
1a
2stwA00
A:10-105
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Pfam Domains
(1, 1)
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all PFAM domains
1a: PFAM_Ets_2stwA01 (A:24-105)
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Clan
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HTH
(544)
Family
:
Ets
(14)
Homo sapiens (Human)
(6)
1a
Ets-2stwA01
A:24-105
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