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Asym. Unit
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Asym.Unit (664 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE SHP-1 C-TERMINAL SH2 DOMAIN COMPLEXED WITH A TYROSINE-PHOSPHORYLATED PEPTIDE FROM NKG2A
Authors
:
T. Kasai, S. Koshiba, M. Inoue, T. Kigawa, S. Yokoyama, Riken Structural Genomics/Proteomics Initiative (Rsgi)
Date
:
30 Nov 07 (Deposition) - 02 Dec 08 (Release) - 02 Dec 08 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A,B (20 x)
Keywords
:
Sh2 Domain, Protein-Peptide Complex, Phosphorylated Peptide Recognition, Phosphotyrosine Binding Domain, Signal Transduction, Alternative Splicing, Cytoplasm, Hydrolase, Nucleus, Phosphoprotein, Protein Phosphatase, Glycoprotein, Lectin, Membrane, Receptor, Signal-Anchor, Transmembrane, Signaling Protein, Structural Genomics, Nppsfa, National Project On Protein Structural And Functional Analyses, Riken Structural Genomics/Proteomics Initiative, Rsgi
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Koshiba, T. Kasai, M. Sato, T. Tomizawa, Y. Motoda, N. Tochio, N. Kobayashi, T. Harada, M. Inoue, A. Tanaka, T. Kigawa, S. Yokoyama
Structural Basis For The Recognition Of The Two Nkg2A Immunoreceptor Tyrosine-Based Inhibitory Motifs (Itims) By The C-Terminal Sh2 Domain Of Protein Tyrosine Phosphatase Shp-1
To Be Published
(for further references see the
PDB file header
)
[
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: O-PHOSPHOTYROSINE (PTRa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
PTR
1
Mod. Amino Acid
O-PHOSPHOTYROSINE
[
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Sites
(0, 0)
Info
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Sorry, no Info available
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available in "Model" view)
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View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: SH2 (-|A:8-111)
2: TYR_PHOSPHATASE_PTP (A:114-118)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SH2
PS50001
Src homology 2 (SH2) domain profile.
PTN6_HUMAN
4-100
110-213
1
-
A:8-111
2
TYR_PHOSPHATASE_PTP
PS50055
PTP type protein phosphatase family profile.
PTN6_HUMAN
244-515
1
A:114-118
[
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Exons
(6, 6)
Info
All Exons
Exon 1.5 (A:1-7 (gaps))
Exon 1.6 (A:7-70)
Exon 1.7 (A:71-109)
Exon 1.8 (A:110-113)
Exon 1.11 (A:114-118 (gaps))
Exon 2.2 (B:1-15)
View:
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All Exon Boundaries
1: Boundary 1.4/1.5
2: Boundary 1.5/1.6
3: Boundary 1.6/1.7
4: Boundary 1.7/1.8
5: Boundary 1.8/1.9
6: Boundary 1.10/1.11
7: Boundary 1.11/1.12
8: Boundary 2.1/2.2
9: Boundary 2.2/2.3
View:
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.3
ENST00000318974
3
ENSE00001164365
chr12:
7060434-7060683
250
PTN6_HUMAN
1-3
3
0
-
-
1.4
ENST00000318974
4
ENSE00000866991
chr12:
7060772-7060894
123
PTN6_HUMAN
3-44
42
0
-
-
1.5
ENST00000318974
5
ENSE00000716206
chr12:
7061146-7061340
195
PTN6_HUMAN
44-109
66
1
A:1-7 (gaps)
55
1.6
ENST00000318974
6
ENSE00000716209
chr12:
7063968-7064157
190
PTN6_HUMAN
109-172
64
1
A:7-70
64
1.7
ENST00000318974
7
ENSE00000716212
chr12:
7064314-7064430
117
PTN6_HUMAN
173-211
39
1
A:71-109
39
1.8
ENST00000318974
8
ENSE00000716214
chr12:
7064535-7064648
114
PTN6_HUMAN
212-249
38
1
A:110-113
4
1.9
ENST00000318974
9
ENSE00000716216
chr12:
7064823-7064919
97
PTN6_HUMAN
250-282
33
0
-
-
1.10
ENST00000318974
10
ENSE00000716218
chr12:
7065305-7065384
80
PTN6_HUMAN
282-308
27
0
-
-
1.11
ENST00000318974
11
ENSE00000716220
chr12:
7065582-7065731
150
PTN6_HUMAN
309-358
50
1
A:114-118 (gaps)
14
1.12
ENST00000318974
12
ENSE00000716222
chr12:
7066817-7066948
132
PTN6_HUMAN
359-402
44
0
-
-
1.13
ENST00000318974
13
ENSE00000716225
chr12:
7067082-7067236
155
PTN6_HUMAN
403-454
52
0
-
-
1.14
ENST00000318974
14
ENSE00000716227
chr12:
7069090-7069157
68
PTN6_HUMAN
454-477
24
0
-
-
1.15
ENST00000318974
15
ENSE00000716229
chr12:
7069251-7069402
152
PTN6_HUMAN
477-527
51
0
-
-
1.16
ENST00000318974
16
ENSE00000716231
chr12:
7069507-7069598
92
PTN6_HUMAN
528-558
31
0
-
-
1.17c
ENST00000318974
17c
ENSE00001358823
chr12:
7069969-7070108
140
PTN6_HUMAN
558-595
38
0
-
-
1.18
ENST00000318974
18
ENSE00001365384
chr12:
7070289-7070479
191
PTN6_HUMAN
-
0
0
-
-
2.1
ENST00000359151
1
ENSE00000993571
chr12:
10605947-10605797
151
NKG2A_HUMAN
-
0
0
-
-
2.2
ENST00000359151
2
ENSE00001337677
chr12:
10603786-10603569
218
NKG2A_HUMAN
1-63
63
1
B:1-15
15
2.3
ENST00000359151
3
ENSE00000915517
chr12:
10603178-10603083
96
NKG2A_HUMAN
63-95
33
0
-
-
2.4
ENST00000359151
4
ENSE00000915516
chr12:
10602566-10602513
54
NKG2A_HUMAN
95-113
19
0
-
-
2.6
ENST00000359151
6
ENSE00001657718
chr12:
10601987-10601836
152
NKG2A_HUMAN
113-163
51
0
-
-
2.7
ENST00000359151
7
ENSE00001633944
chr12:
10600231-10600131
101
NKG2A_HUMAN
164-197
34
0
-
-
2.8
ENST00000359151
8
ENSE00001490174
chr12:
10599261-10598642
620
NKG2A_HUMAN
197-233
37
0
-
-
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SCOP Domains
(0, 0)
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_2rmxA00 (A:1-118)
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(
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Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
SHC Adaptor Protein
(206)
Homologous Superfamily
:
SHC Adaptor Protein
(206)
Human (Homo sapiens)
(147)
1a
2rmxA00
A:1-118
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Pfam Domains
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