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2RFM
Biol. Unit 1
Info
Asym.Unit (147 KB)
Biol.Unit 1 (73 KB)
Biol.Unit 2 (70 KB)
Biol.Unit 3 (278 KB)
Biol.Unit 4 (141 KB)
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(1)
Title
:
STRUCTURE OF A THERMOPHILIC ANKYRIN REPEAT PROTEIN
Authors
:
C. Loew, U. Weininger, P. Neumann, M. T. Stubbs, J. Balbach
Date
:
01 Oct 07 (Deposition) - 11 Mar 08 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.65
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: A,B (2x)
Biol. Unit 4: A,B (1x)
Keywords
:
Ankyrin Repeat, Ank Repeat, Protein Binding
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. Loew, U. Weininger, P. Neumann, M. Klepsch, H. Lilie, M. T. Stubbs, J. Balbach
Structural Insights Into An Equilibrium Folding Intermediat Of An Archaeal Ankyrin Repeat Protein
Proc. Natl. Acad. Sci. Usa V. 105 3779 2008
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Hetero Components
(4, 10)
Info
All Hetero Components
1a: TRIS-HYDROXYMETHYL-METHYL-AMMONIUM (144a)
2a: 1,3-BUTANEDIOL (BU2a)
2b: 1,3-BUTANEDIOL (BU2b)
2c: 1,3-BUTANEDIOL (BU2c)
2d: 1,3-BUTANEDIOL (BU2d)
3a: CHLORIDE ION (CLa)
3b: CHLORIDE ION (CLb)
3c: CHLORIDE ION (CLc)
4a: GLYCEROL (GOLa)
4b: GLYCEROL (GOLb)
4c: GLYCEROL (GOLc)
4d: GLYCEROL (GOLd)
4e: GLYCEROL (GOLe)
4f: GLYCEROL (GOLf)
5a: SULFATE ION (SO4a)
5b: SULFATE ION (SO4b)
5c: SULFATE ION (SO4c)
5d: SULFATE ION (SO4d)
5e: SULFATE ION (SO4e)
5f: SULFATE ION (SO4f)
5g: SULFATE ION (SO4g)
5h: SULFATE ION (SO4h)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
144
1
Ligand/Ion
TRIS-HYDROXYMETHYL-METHYL-AMMONIUM
2
BU2
2
Ligand/Ion
1,3-BUTANEDIOL
3
CL
-1
Ligand/Ion
CHLORIDE ION
4
GOL
3
Ligand/Ion
GLYCEROL
5
SO4
4
Ligand/Ion
SULFATE ION
[
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC3 (SOFTWARE)
03: AC4 (SOFTWARE)
04: AC5 (SOFTWARE)
05: AC6 (SOFTWARE)
06: BC1 (SOFTWARE)
07: BC4 (SOFTWARE)
08: BC5 (SOFTWARE)
09: BC8 (SOFTWARE)
10: BC9 (SOFTWARE)
11: CC1 (SOFTWARE)
12: CC2 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN A:76 , ARG A:77 , LEU A:78 , GLY A:79 , HOH A:232 , HOH A:233 , HOH A:275 , HOH A:330 , HOH A:354 , HOH A:399 , HOH A:400
BINDING SITE FOR RESIDUE SO4 A 190
02
AC3
SOFTWARE
LYS A:181 , ASN B:76 , GLY B:109 , SER B:111 , GLU B:112 , HOH B:211 , HOH B:241 , HOH B:349 , HOH B:377 , HOH B:421
BINDING SITE FOR RESIDUE SO4 B 191
03
AC4
SOFTWARE
LYS A:61 , HOH A:286 , HOH A:349 , HOH A:430 , ARG B:127 , HOH B:281
BINDING SITE FOR RESIDUE SO4 B 192
04
AC5
SOFTWARE
GLY A:175 , GLN A:177 , GLU A:178 , HOH A:393 , HOH A:402
BINDING SITE FOR RESIDUE SO4 A 191
05
AC6
SOFTWARE
ARG A:127 , SER A:158 , ALA A:159 , ARG A:160
BINDING SITE FOR RESIDUE SO4 A 193
06
BC1
SOFTWARE
SER A:111 , GLY A:142 , ARG A:143 , SER A:144 , GLU A:145 , ILE A:146 , HOH A:215 , HOH A:229 , HOH A:315 , HOH A:406
BINDING SITE FOR RESIDUE 144 A 194
07
BC4
SOFTWARE
LYS A:74 , ASN A:75 , TYR A:110 , HOH A:236 , HOH A:438 , ARG B:176 , HOH B:352
BINDING SITE FOR RESIDUE BU2 A 195
08
BC5
SOFTWARE
GLU A:53 , ASN A:54 , GLY A:154 , HOH A:308 , HOH A:388 , HOH A:394
BINDING SITE FOR RESIDUE BU2 A 196
09
BC8
SOFTWARE
ARG A:33 , MET A:41 , HOH A:282 , HOH A:304 , HOH A:418 , HOH A:432 , ARG B:172 , ILE B:173
BINDING SITE FOR RESIDUE GOL A 197
10
BC9
SOFTWARE
HOH A:216 , LYS B:140 , TYR B:141 , PHE B:174 , ARG B:176 , HOH B:234 , HOH B:254 , HOH B:306 , HOH B:323 , HOH B:352
BINDING SITE FOR RESIDUE GOL B 201
11
CC1
SOFTWARE
LYS A:140 , TYR A:141 , PHE A:174 , HOH A:284 , HOH A:319 , HOH A:332 , HOH A:366 , HOH A:395 , HOH B:292
BINDING SITE FOR RESIDUE GOL A 198
12
CC2
SOFTWARE
LYS A:99 , TRP A:104 , ILE A:107 , TYR A:141 , HOH A:283 , HOH A:296 , HOH A:301 , HOH A:341 , HOH A:405 , HOH A:408 , ILE B:107 , HOH B:202
BINDING SITE FOR RESIDUE GOL A 199
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: ANK_REP_REGION (A:26-185)
2: ANK_REPEAT (A:64-96,A:97-129,A:130-162)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ANK_REP_REGION
PS50297
Ankyrin repeat region circular profile.
Y1425_THEVO
26-185
1
A:26-185
-
2
ANK_REPEAT
PS50088
Ankyrin repeat profile.
Y1425_THEVO
64-96
97-129
130-162
3
A:64-96
-
A:97-129
-
A:130-162
-
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Show PDB file:
Asym.Unit (147 KB)
Header - Asym.Unit
Biol.Unit 1 (73 KB)
Header - Biol.Unit 1
Biol.Unit 2 (70 KB)
Header - Biol.Unit 2
Biol.Unit 3 (278 KB)
Header - Biol.Unit 3
Biol.Unit 4 (141 KB)
Header - Biol.Unit 4
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