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2QE7
Asym. Unit
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Asym.Unit (1.3 MB)
Biol.Unit 1, α-C (1.2 MB)
Biol.Unit 1 (1.2 MB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE F1-ATPASE FROM THE THERMOALKALIPHILIC BACTERIUM BACILLUS SP. TA2.A1
Authors
:
A. Stocker, S. Keis, J. Vonck, G. M. Cook, P. Dimroth
Date
:
25 Jun 07 (Deposition) - 21 Aug 07 (Release) - 08 May 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.06
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B,C,D,E,F,G,H (1x)
Keywords
:
Blockage Of Atp Hydrolysis, F1-Atpase, Atp Synthase, Single Particle Analysis, Thermoalkaliphilic, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Stocker, S. Keis, J. Vonck, G. M. Cook, P. Dimroth
The Structural Basis For Unidirectional Rotation Of Thermoalkaliphilic F(1)-Atpase.
Structure V. 15 904 2007
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(5, 19)
Info
All SCOP Domains
1a: SCOP_d2qe7a3 (A:372-500)
1b: SCOP_d2qe7b3 (B:372-500)
1c: SCOP_d2qe7c3 (C:372-500)
1d: SCOP_d2qe7d3 (D:350-462)
1e: SCOP_d2qe7e3 (E:350-462)
1f: SCOP_d2qe7f3 (F:350-462)
2a: SCOP_d2qe7a1 (A:27-94)
2b: SCOP_d2qe7b1 (B:27-94)
2c: SCOP_d2qe7c1 (C:27-94)
2d: SCOP_d2qe7d1 (D:2-76)
2e: SCOP_d2qe7e1 (E:2-76)
2f: SCOP_d2qe7f1 (F:2-76)
3a: SCOP_d2qe7a2 (A:95-371)
3b: SCOP_d2qe7b2 (B:95-371)
3c: SCOP_d2qe7c2 (C:95-371)
4a: SCOP_d2qe7d2 (D:77-349)
4b: SCOP_d2qe7e2 (E:77-349)
4c: SCOP_d2qe7f2 (F:77-349)
5a: SCOP_d2qe7g_ (G:)
View:
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Classes
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Superfamilies
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Families
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Left-handed superhelix
(73)
Superfamily
:
C-terminal domain of alpha and beta subunits of F1 ATP synthase
(55)
Family
:
automated matches
(14)
Protein domain
:
automated matches
(14)
Bacillus sp. [TaxId: 90973]
(1)
1a
d2qe7a3
A:372-500
1b
d2qe7b3
B:372-500
1c
d2qe7c3
C:372-500
1d
d2qe7d3
D:350-462
1e
d2qe7e3
E:350-462
1f
d2qe7f3
F:350-462
Class
:
All beta proteins
(24004)
Fold
:
Domain of alpha and beta subunits of F1 ATP synthase-like
(89)
Superfamily
:
N-terminal domain of alpha and beta subunits of F1 ATP synthase
(55)
Family
:
automated matches
(14)
Protein domain
:
automated matches
(14)
Bacillus sp. [TaxId: 90973]
(1)
2a
d2qe7a1
A:27-94
2b
d2qe7b1
B:27-94
2c
d2qe7c1
C:27-94
2d
d2qe7d1
D:2-76
2e
d2qe7e1
E:2-76
2f
d2qe7f1
F:2-76
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
automated matches
(303)
Protein domain
:
automated matches
(303)
Bacillus sp. [TaxId: 90973]
(1)
3a
d2qe7a2
A:95-371
3b
d2qe7b2
B:95-371
3c
d2qe7c2
C:95-371
Family
:
RecA protein-like (ATPase-domain)
(159)
Protein domain
:
automated matches
(32)
Bacillus sp. [TaxId: 90973]
(1)
4a
d2qe7d2
D:77-349
4b
d2qe7e2
E:77-349
4c
d2qe7f2
F:77-349
Fold
:
Pyruvate kinase C-terminal domain-like
(59)
Superfamily
:
ATP synthase (F1-ATPase), gamma subunit
(29)
Family
:
automated matches
(7)
Protein domain
:
automated matches
(7)
Bacillus sp. [TaxId: 90973]
(1)
5a
d2qe7g_
G:
[
close SCOP info
]
CATH Domains
(7, 20)
Info
all CATH domains
1a: CATH_2qe7D02 (D:78-345)
1b: CATH_2qe7E02 (E:78-345)
1c: CATH_2qe7F02 (F:78-345)
1d: CATH_2qe7A02 (A:94-371)
1e: CATH_2qe7B02 (B:94-371)
1f: CATH_2qe7C02 (C:94-371)
2a: CATH_2qe7D03 (D:347-462)
2b: CATH_2qe7E03 (E:347-462)
2c: CATH_2qe7F03 (F:347-462)
3a: CATH_2qe7A03 (A:372-497)
3b: CATH_2qe7B03 (B:372-497)
3c: CATH_2qe7C03 (C:372-497)
4a: CATH_2qe7H02 (H:89-135)
5a: CATH_2qe7A01 (A:27-93)
5b: CATH_2qe7B01 (B:27-93)
5c: CATH_2qe7C01 (C:27-93)
6a: CATH_2qe7D01 (D:2-76)
6b: CATH_2qe7E01 (E:2-76)
6c: CATH_2qe7F01 (F:2-76)
7a: CATH_2qe7H01 (H:1-88)
View:
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)
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)
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)
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)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
P-loop containing nucleotide triphosphate hydrolases
(1378)
Ta2 (Bacillus sp)
(1)
1a
2qe7D02
D:78-345
1b
2qe7E02
E:78-345
1c
2qe7F02
F:78-345
1d
2qe7A02
A:94-371
1e
2qe7B02
B:94-371
1f
2qe7C02
C:94-371
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3
(32)
Homologous Superfamily
:
Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
(32)
Ta2 (Bacillus sp)
(1)
2a
2qe7D03
D:347-462
2b
2qe7E03
E:347-462
2c
2qe7F03
F:347-462
Architecture
:
Up-down Bundle
(3216)
Topology
:
Lysin
(39)
Homologous Superfamily
:
[code=1.20.150.20, no name defined]
(33)
Ta2 (Bacillus sp)
(1)
3a
2qe7A03
A:372-497
3b
2qe7B03
B:372-497
3c
2qe7C03
C:372-497
Topology
:
Single alpha-helices involved in coiled-coils or other helix-helix interfaces
(552)
Homologous Superfamily
:
[code=1.20.5.440, no name defined]
(14)
Ta2 (Bacillus sp)
(1)
4a
2qe7H02
H:89-135
Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
Elongation Factor Tu (Ef-tu); domain 3
(323)
Homologous Superfamily
:
[code=2.40.30.20, no name defined]
(40)
Ta2 (Bacillus sp)
(1)
5a
2qe7A01
A:27-93
5b
2qe7B01
B:27-93
5c
2qe7C01
C:27-93
Topology
:
Thrombin, subunit H
(1535)
Homologous Superfamily
:
[code=2.40.10.170, no name defined]
(33)
Ta2 (Bacillus sp)
(1)
6a
2qe7D01
D:2-76
6b
2qe7E01
E:2-76
6c
2qe7F01
F:2-76
Architecture
:
Sandwich
(5577)
Topology
:
ATP Synthase; domain 1
(10)
Homologous Superfamily
:
ATP Synthase; domain 1
(10)
Ta2 (Bacillus sp)
(1)
7a
2qe7H01
H:1-88
[
close CATH info
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Pfam Domains
(6, 21)
Info
all PFAM domains
1a: PFAM_ATP_synt_ab_N_2qe7F01 (F:6-74)
1b: PFAM_ATP_synt_ab_N_2qe7F02 (F:6-74)
1c: PFAM_ATP_synt_ab_N_2qe7F03 (F:6-74)
1d: PFAM_ATP_synt_ab_N_2qe7C01 (C:27-92)
1e: PFAM_ATP_synt_ab_N_2qe7C02 (C:27-92)
1f: PFAM_ATP_synt_ab_N_2qe7C03 (C:27-92)
2a: PFAM_ATP_synt_ab_2qe7F04 (F:130-344)
2b: PFAM_ATP_synt_ab_2qe7F05 (F:130-344)
2c: PFAM_ATP_synt_ab_2qe7F06 (F:130-344)
2d: PFAM_ATP_synt_ab_2qe7C04 (C:148-364)
2e: PFAM_ATP_synt_ab_2qe7C05 (C:148-364)
2f: PFAM_ATP_synt_ab_2qe7C06 (C:148-364)
3a: PFAM_ATP_synt_2qe7G01 (G:3-266)
4a: PFAM_ATP_synt_DE_2qe7H01 (H:86-134)
5a: PFAM_ATP_synt_DE_N_2qe7H02 (H:4-82)
6a: PFAM_ATP_synt_ab_C_2qe7F07 (F:357-462)
6b: PFAM_ATP_synt_ab_C_2qe7F08 (F:357-462)
6c: PFAM_ATP_synt_ab_C_2qe7F09 (F:357-462)
6d: PFAM_ATP_synt_ab_C_2qe7C07 (C:376-480)
6e: PFAM_ATP_synt_ab_C_2qe7C08 (C:376-480)
6f: PFAM_ATP_synt_ab_C_2qe7C09 (C:376-480)
View:
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Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
HAS-barrel
(27)
Family
:
ATP-synt_ab_N
(27)
Bacillus sp. TA2.A1
(1)
1a
ATP-synt_ab_N-2qe7F01
F:6-74
1b
ATP-synt_ab_N-2qe7F02
F:6-74
1c
ATP-synt_ab_N-2qe7F03
F:6-74
1d
ATP-synt_ab_N-2qe7C01
C:27-92
1e
ATP-synt_ab_N-2qe7C02
C:27-92
1f
ATP-synt_ab_N-2qe7C03
C:27-92
Clan
:
P-loop_NTPase
(1112)
Family
:
ATP-synt_ab
(44)
Bacillus sp. TA2.A1
(1)
2a
ATP-synt_ab-2qe7F04
F:130-344
2b
ATP-synt_ab-2qe7F05
F:130-344
2c
ATP-synt_ab-2qe7F06
F:130-344
2d
ATP-synt_ab-2qe7C04
C:148-364
2e
ATP-synt_ab-2qe7C05
C:148-364
2f
ATP-synt_ab-2qe7C06
C:148-364
Clan
:
no clan defined [family: ATP-synt]
(22)
Family
:
ATP-synt
(22)
Bacillus sp. TA2.A1
(1)
3a
ATP-synt-2qe7G01
G:3-266
Clan
:
no clan defined [family: ATP-synt_DE]
(2)
Family
:
ATP-synt_DE
(2)
Bacillus sp. TA2.A1
(1)
4a
ATP-synt_DE-2qe7H01
H:86-134
Clan
:
no clan defined [family: ATP-synt_DE_N]
(15)
Family
:
ATP-synt_DE_N
(15)
Bacillus sp. TA2.A1
(1)
5a
ATP-synt_DE_N-2qe7H02
H:4-82
Clan
:
no clan defined [family: ATP-synt_ab_C]
(32)
Family
:
ATP-synt_ab_C
(32)
Bacillus sp. TA2.A1
(1)
6a
ATP-synt_ab_C-2qe7F07
F:357-462
6b
ATP-synt_ab_C-2qe7F08
F:357-462
6c
ATP-synt_ab_C-2qe7F09
F:357-462
6d
ATP-synt_ab_C-2qe7C07
C:376-480
6e
ATP-synt_ab_C-2qe7C08
C:376-480
6f
ATP-synt_ab_C-2qe7C09
C:376-480
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