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2QA5
Asym. Unit
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Asym.Unit (81 KB)
Biol.Unit 1 (74 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF SEPT2 G-DOMAIN
Authors
:
M. Sirajuddin, A. Wittinghofer
Date
:
14 Jun 07 (Deposition) - 07 Aug 07 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.40
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Septin2-Gdp, Biological Dimer, Cell Cycle, Cell Division, Gtp-Binding, Nucleotide-Binding, Phosphorylation, Structural Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Sirajuddin, M. Farkasovsky, F. Hauer, D. Kuhlmann, I. G. Macara, M. Weyand, H. Stark, A. Wittinghofer
Structural Insight Into Filament Formation By Mammalian Septins.
Nature V. 449 311 2007
(for further references see the
PDB file header
)
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Hetero Components
(2, 10)
Info
All Hetero Components
1a: GUANOSINE-5'-DIPHOSPHATE (GDPa)
1b: GUANOSINE-5'-DIPHOSPHATE (GDPb)
2a: SELENOMETHIONINE (MSEa)
2b: SELENOMETHIONINE (MSEb)
2c: SELENOMETHIONINE (MSEc)
2d: SELENOMETHIONINE (MSEd)
2e: SELENOMETHIONINE (MSEe)
2f: SELENOMETHIONINE (MSEf)
2g: SELENOMETHIONINE (MSEg)
2h: SELENOMETHIONINE (MSEh)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GDP
2
Ligand/Ion
GUANOSINE-5'-DIPHOSPHATE
2
MSE
8
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY A:47 , LEU A:48 , GLY A:49 , LYS A:50 , SER A:51 , THR A:52 , LYS A:183 , ASP A:185 , VAL A:240 , GLY A:241 , ARG A:256 , TYR A:258 , THR B:186 , GLU B:191
BINDING SITE FOR RESIDUE GDP A 316
2
AC2
SOFTWARE
THR A:186 , GLU A:191 , GLY B:47 , LEU B:48 , GLY B:49 , LYS B:50 , SER B:51 , THR B:52 , LYS B:183 , ASP B:185 , VAL B:240 , GLY B:241 , TYR B:258
BINDING SITE FOR RESIDUE GDP B 316
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: G_SEPTIN (A:34-304,B:34-304)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
G_SEPTIN
PS51719
Septin-type guanine nucleotide-binding (G) domain profile.
SEPT2_HUMAN
34-306
2
A:34-304
B:34-304
[
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Exons
(8, 16)
Info
All Exons
Exon 1.9c (A:20-44 | B:20-44)
Exon 1.10d (A:44-62 | B:44-62)
Exon 1.11h (A:78-102 (gaps) | B:78-101 (gaps))
Exon 1.13h (A:116-158 (gaps) | B:116-159 (gaps...)
Exon 1.13q (A:160-198 (gaps) | B:159-198 (gaps...)
Exon 1.14d (A:199-232 (gaps) | B:199-232 (gaps...)
Exon 1.15c (A:233-281 (gaps) | B:233-281 (gaps...)
Exon 1.16a (A:281-304 | B:281-304)
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All Exon Boundaries
1: Boundary 1.7d/1.9c
2: Boundary 1.9c/1.10d
3: Boundary 1.10d/1.11h
4: Boundary 1.11h/1.13h
5: Boundary 1.13h/1.13q
6: Boundary 1.13q/1.14d
7: Boundary 1.14d/1.15c
8: Boundary 1.15c/1.16a
9: Boundary 1.16a/1.17a
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000391973
1a
ENSE00001916200
chr2:
242254515-242255025
511
SEPT2_HUMAN
-
0
0
-
-
1.7d
ENST00000391973
7d
ENSE00002165908
chr2:
242263631-242263656
26
SEPT2_HUMAN
1-3
3
0
-
-
1.9c
ENST00000391973
9c
ENSE00001592925
chr2:
242265408-242265528
121
SEPT2_HUMAN
4-44
41
2
A:20-44
B:20-44
25
25
1.10d
ENST00000391973
10d
ENSE00002190005
chr2:
242274541-242274627
87
SEPT2_HUMAN
44-73
30
2
A:44-62
B:44-62
19
19
1.11h
ENST00000391973
11h
ENSE00001140497
chr2:
242275390-242275513
124
SEPT2_HUMAN
73-114
42
2
A:78-102 (gaps)
B:78-101 (gaps)
25
24
1.13h
ENST00000391973
13h
ENSE00001140494
chr2:
242276797-242276931
135
SEPT2_HUMAN
114-159
46
2
A:116-158 (gaps)
B:116-159 (gaps)
43
44
1.13q
ENST00000391973
13q
ENSE00001140486
chr2:
242277088-242277205
118
SEPT2_HUMAN
159-198
40
2
A:160-198 (gaps)
B:159-198 (gaps)
39
40
1.14d
ENST00000391973
14d
ENSE00001140480
chr2:
242282407-242282508
102
SEPT2_HUMAN
199-232
34
2
A:199-232 (gaps)
B:199-232 (gaps)
34
34
1.15c
ENST00000391973
15c
ENSE00001140474
chr2:
242283167-242283312
146
SEPT2_HUMAN
233-281
49
2
A:233-281 (gaps)
B:233-281 (gaps)
49
49
1.16a
ENST00000391973
16a
ENSE00001140465
chr2:
242285581-242285664
84
SEPT2_HUMAN
281-309
29
2
A:281-304
B:281-304
24
24
1.17a
ENST00000391973
17a
ENSE00001140455
chr2:
242287549-242287606
58
SEPT2_HUMAN
309-328
20
0
-
-
1.18a
ENST00000391973
18a
ENSE00001147389
chr2:
242289488-242289618
131
SEPT2_HUMAN
329-361
33
0
-
-
1.19d
ENST00000391973
19d
ENSE00001557502
chr2:
242291382-242293439
2058
SEPT2_HUMAN
-
0
0
-
-
[
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SCOP Domains
(0, 0)
Info
All SCOP Domains
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_Septin_2qa5B01 (B:34-304)
1b: PFAM_Septin_2qa5B02 (B:34-304)
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(
)
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(
)
(
)
Clan
:
P-loop_NTPase
(1112)
Family
:
Septin
(3)
Homo sapiens (Human)
(3)
1a
Septin-2qa5B01
B:34-304
1b
Septin-2qa5B02
B:34-304
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