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2PI5
Biol. Unit 1
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Asym.Unit (157 KB)
Biol.Unit 1 (152 KB)
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(1)
Title
:
T7 RNA POLYMERASE COMPLEXED WITH A PHI10 PROMOTER
Authors
:
W. P. Kennedy, J. R. Momand, Y. W. Yin
Date
:
12 Apr 07 (Deposition) - 19 Jun 07 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.90
Chains
:
Asym. Unit : A,P,T
Biol. Unit 1: A,P,T (1x)
Keywords
:
T7 Rna Polymerase, Initiating Nucleoites, Transferase/Dna Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
W. P. Kennedy, J. R. Momand, Y. W. Yin
Mechanism For De Novo Rna Synthesis And Initiating Nucleotide Specificity By T7 Rna Polymerase.
J. Mol. Biol. V. 370 256 2007
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(2, 2)
Info
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1: RNA_POL_PHAGE_1 (A:533-544)
2: RNA_POL_PHAGE_2 (A:625-639)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RNA_POL_PHAGE_1
PS00900
Bacteriophage-type RNA polymerase family active site signature 1.
RPOL_BPT7
533-544
1
A:533-544
2
RNA_POL_PHAGE_2
PS00489
Bacteriophage-type RNA polymerase family active site signature 2.
RPOL_BPT7
625-639
1
A:625-639
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Exons
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SCOP Domains
(1, 1)
Info
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1a: SCOP_d2pi5a_ (A:)
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Protein Domains
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Organisms
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(
)
Class
:
Multi-domain proteins (alpha and beta)
(2421)
Fold
:
DNA/RNA polymerases
(850)
Superfamily
:
DNA/RNA polymerases
(850)
Family
:
T7 RNA polymerase
(12)
Protein domain
:
automated matches
(1)
Enterobacteria phage [TaxId: 10760]
(1)
1a
d2pi5a_
A:
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CATH Domains
(5, 5)
Info
all CATH domains
1a: CATH_2pi5A03 (A:421-449,A:528-553,A:785-872)
2a: CATH_2pi5A05 (A:554-784)
3a: CATH_2pi5A02 (A:326-411)
4a: CATH_2pi5A04 (A:450-527)
5a: CATH_2pi5A01 (A:8-325)
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)
Organisms
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(
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Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Alpha-Beta Plaits
(1688)
Homologous Superfamily
:
[code=3.30.70.370, no name defined]
(99)
[unclassified]
(84)
1a
2pi5A03
A:421-449,A:528-553,A:785-872
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
DNA polymerase; domain 1
(617)
Homologous Superfamily
:
5' to 3' exonuclease, C-terminal subdomain
(384)
[unclassified]
(230)
2a
2pi5A05
A:554-784
Topology
:
Helix Hairpins
(718)
Homologous Superfamily
:
[code=1.10.287.260, no name defined]
(11)
[unclassified]
(7)
3a
2pi5A02
A:326-411
Homologous Superfamily
:
[code=1.10.287.280, no name defined]
(11)
[unclassified]
(7)
4a
2pi5A04
A:450-527
Topology
:
T7 RNA polymerase; domain 1
(11)
Homologous Superfamily
:
T7 RNA polymerase, domain 1
(11)
[unclassified]
(7)
5a
2pi5A01
A:8-325
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Pfam Domains
(1, 1)
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all PFAM domains
1a: PFAM_RNA_pol_2pi5A01 (A:449-883)
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Clan
:
no clan defined [family: RNA_pol]
(7)
Family
:
RNA_pol
(7)
Enterobacteria phage T7 (Bacteriophage T7)
(7)
1a
RNA_pol-2pi5A01
A:449-883
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Asym.Unit (157 KB)
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