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2OSG
Asym. Unit
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Asym.Unit (906 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE AND BINDING PROPERTY OF THE DOMAIN-SWAPPED DIMER OF ZO2PDZ2
Authors
:
J. W. Wu, Y. S. Yang, J. H. Zhang, P. Ji, J. H. Wu, Y. Y. Shi
Date
:
05 Feb 07 (Deposition) - 25 Sep 07 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A,B (20 x)
Keywords
:
Tight Junction, Zo-2, Pdz Domain, Homodimer, Domain Swapping, Nmr Structure, Cell Adhesion
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. W. Wu, Y. S. Yang, J. H. Zhang, P. Ji, W. J. Du, P. Jiang, D. H. Xie, H. D. Huang, M. Wu, G. Z. Zhang, J. H. Wu, Y. Y. Shi
Domain-Swapped Dimerization Of The Second Pdz Domain Of Zo2 May Provide A Structural Basis For The Polymerization Of Claudins
J. Biol. Chem. V. 282 35988 2007
(for further references see the
PDB file header
)
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Hetero Components
(0, 0)
Info
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Sites
(0, 0)
Info
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: PDZ (-|A:3-81,B:86-164|-)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PDZ
PS50106
PDZ domain profile.
ZO2_HUMAN
33-120
307-385
509-590
2
-
A:3-81
B:86-164
-
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Exons
(3, 6)
Info
All Exons
Exon 1.6b (A:1-14 | B:84-97)
Exon 1.7 (A:14-48 | B:97-131)
Exon 1.8 (A:49-83 | B:132-166)
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All Exon Boundaries
1: Boundary 1.5a/1.6b
2: Boundary 1.6b/1.7
3: Boundary 1.7/1.8
4: Boundary 1.8/1.9
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2a
ENST00000377245
2a
ENSE00001639423
chr9:
71789081-71789348
268
ZO2_HUMAN
1-20
20
0
-
-
1.3
ENST00000377245
3
ENSE00001637501
chr9:
71827464-71827517
54
ZO2_HUMAN
21-38
18
0
-
-
1.4
ENST00000377245
4
ENSE00000803615
chr9:
71831255-71831379
125
ZO2_HUMAN
39-80
42
0
-
-
1.5a
ENST00000377245
5a
ENSE00001229544
chr9:
71833173-71833275
103
ZO2_HUMAN
80-114
35
0
-
-
1.6b
ENST00000377245
6b
ENSE00000803618
chr9:
71835803-71836412
610
ZO2_HUMAN
115-318
204
2
A:1-14
B:84-97
14
14
1.7
ENST00000377245
7
ENSE00000803619
chr9:
71840220-71840323
104
ZO2_HUMAN
318-352
35
2
A:14-48
B:97-131
35
35
1.8
ENST00000377245
8
ENSE00000803622
chr9:
71840938-71841091
154
ZO2_HUMAN
353-404
52
2
A:49-83
B:132-166
35
35
1.9
ENST00000377245
9
ENSE00000803624
chr9:
71842681-71842789
109
ZO2_HUMAN
404-440
37
0
-
-
1.10
ENST00000377245
10
ENSE00000803626
chr9:
71842897-71843030
134
ZO2_HUMAN
440-485
46
0
-
-
1.11
ENST00000377245
11
ENSE00000803627
chr9:
71844100-71844166
67
ZO2_HUMAN
485-507
23
0
-
-
1.12
ENST00000377245
12
ENSE00000803630
chr9:
71844998-71845148
151
ZO2_HUMAN
507-557
51
0
-
-
1.13
ENST00000377245
13
ENSE00000705645
chr9:
71849355-71849463
109
ZO2_HUMAN
558-594
37
0
-
-
1.14
ENST00000377245
14
ENSE00000705644
chr9:
71850944-71851154
211
ZO2_HUMAN
594-664
71
0
-
-
1.15
ENST00000377245
15
ENSE00000803633
chr9:
71851865-71852052
188
ZO2_HUMAN
664-727
64
0
-
-
1.16
ENST00000377245
16
ENSE00000705642
chr9:
71852794-71852889
96
ZO2_HUMAN
727-759
33
0
-
-
1.17
ENST00000377245
17
ENSE00000705641
chr9:
71853626-71853705
80
ZO2_HUMAN
759-785
27
0
-
-
1.18
ENST00000377245
18
ENSE00000803637
chr9:
71854853-71855063
211
ZO2_HUMAN
786-856
71
0
-
-
1.19b
ENST00000377245
19b
ENSE00000803638
chr9:
71861606-71861706
101
ZO2_HUMAN
856-889
34
0
-
-
1.20b
ENST00000377245
20b
ENSE00000803640
chr9:
71862928-71863140
213
ZO2_HUMAN
890-960
71
0
-
-
1.21
ENST00000377245
21
ENSE00000705638
chr9:
71864291-71864401
111
ZO2_HUMAN
961-997
37
0
-
-
1.22
ENST00000377245
22
ENSE00001229349
chr9:
71865951-71866280
330
ZO2_HUMAN
998-1107
110
0
-
-
1.23
ENST00000377245
23
ENSE00001229501
chr9:
71867731-71867816
86
ZO2_HUMAN
1108-1136
29
0
-
-
1.24
ENST00000377245
24
ENSE00001524662
chr9:
71869125-71870120
996
ZO2_HUMAN
1136-1190
55
0
-
-
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_PDZ_2osgB01 (B:85-161)
1b: PFAM_PDZ_2osgB02 (B:85-161)
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Clan
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PDZ-like
(184)
Family
:
PDZ
(172)
Homo sapiens (Human)
(96)
1a
PDZ-2osgB01
B:85-161
1b
PDZ-2osgB02
B:85-161
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Asym.Unit (906 KB)
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