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2O10
Asym. Unit
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Asym.Unit (326 KB)
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Models
(19 )
Title
:
SOLUTION STRUCTURE OF THE N-TERMINAL LIM DOMAIN OF MLP/CRP3
Authors
:
T. Schallus, C. Muhle-Goll, C. Edlich
Date
:
28 Nov 06 (Deposition) - 11 Dec 07 (Release) - 24 Feb 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (19 x)
Keywords
:
Lim Domain, Zinc Binding, Crp, Mlp, Metal Binding Protein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
T. Schallus, G. Stier, K. Feher, C. Muhle-Goll
Structure Of The Muscular Lim Protein Mlp And Its Interaction With Actinin
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: ZINC ION (ZNa)
1b: ZINC ION (ZNb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ZN
2
Ligand/Ion
ZINC ION
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
CYS A:37 , CYS A:40 , CYS A:58 , CYS A:61
BINDING SITE FOR RESIDUE ZN A 86
2
AC2
SOFTWARE
CYS A:10 , CYS A:13 , HIS A:31 , CYS A:34
BINDING SITE FOR RESIDUE ZN A 87
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SAPs(SNPs)/Variants
(2, 2)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
1: VAR_045932 (L44P, chain A, )
2: VAR_045934 (C58G, chain A, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_045932
L
44
P
CSRP3_HUMAN
Disease (CMH12)
---
A
L
44
P
2
UniProt
VAR_045934
C
58
G
CSRP3_HUMAN
Disease (CMH12)
---
A
C
58
G
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: LIM_DOMAIN_2 (A:8-66|-)
2: LIM_DOMAIN_1 (A:10-44|-)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
LIM_DOMAIN_2
PS50023
LIM domain profile.
CSRP3_HUMAN
8-68
118-178
1
A:8-66
-
2
LIM_DOMAIN_1
PS00478
LIM zinc-binding domain signature.
CSRP3_HUMAN
10-44
120-154
1
A:10-44
-
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Exons
(2, 2)
Info
All Exons
Exon 1.3 (A:7-38)
Exon 1.4 (A:38-66)
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All Exon Boundaries
1: Boundary 1.2/1.3
2: Boundary 1.3/1.4
3: Boundary 1.4/1.5
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2
ENST00000265968
2
ENSE00001411731
chr11:
19223589-19223501
89
CSRP3_HUMAN
-
0
0
-
-
1.3
ENST00000265968
3
ENSE00000997759
chr11:
19214023-19213884
140
CSRP3_HUMAN
1-38
38
1
A:7-38
32
1.4
ENST00000265968
4
ENSE00000707241
chr11:
19209851-19209683
169
CSRP3_HUMAN
38-94
57
1
A:38-66
29
1.5
ENST00000265968
5
ENSE00000707240
chr11:
19207895-19207763
133
CSRP3_HUMAN
94-138
45
0
-
-
1.6
ENST00000265968
6
ENSE00001746098
chr11:
19206592-19206499
94
CSRP3_HUMAN
139-170
32
0
-
-
1.7b
ENST00000265968
7b
ENSE00001128665
chr11:
19204293-19203578
716
CSRP3_HUMAN
170-194
25
0
-
-
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2o10a1 (A:7-35)
1b: SCOP_d2o10a2 (A:36-66)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Small proteins
(3458)
Fold
:
Glucocorticoid receptor-like (DNA-binding domain)
(292)
Superfamily
:
Glucocorticoid receptor-like (DNA-binding domain)
(292)
Family
:
automated matches
(14)
Protein domain
:
automated matches
(14)
Human (Homo sapiens) [TaxId: 9606]
(8)
1a
d2o10a1
A:7-35
1b
d2o10a2
A:36-66
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_2o10A00 (A:7-66)
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)
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Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Ribbon
(789)
Topology
:
Cysteine Rich Protein
(18)
Homologous Superfamily
:
Cysteine Rich Protein
(18)
Human (Homo sapiens)
(7)
1a
2o10A00
A:7-66
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_LIM_2o10A01 (A:10-66)
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Clans
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Clan
:
no clan defined [family: LIM]
(23)
Family
:
LIM
(23)
Homo sapiens (Human)
(18)
1a
LIM-2o10A01
A:10-66
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Chain A
Asymmetric Unit 1
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