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Getting 'Biological Unit' information from database.
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Getting 'Hetero Component' information from database.
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Getting 'Site' information from database.
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Getting 'PROSITE' information from database.
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Getting 'Exon' information from database.
2LHA
Asym. Unit
Info
Asym.Unit (467 KB)
Biol.Unit 1 (48 KB)
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Models
(10 )
Title
:
SOLUTION STRUCTURE OF C2B WITH IP6
Authors
:
M. Joung, S. K. Mohan, C. Yu
Date
:
08 Aug 11 (Deposition) - 02 May 12 (Release) - 27 Apr 16 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (10 x)
Biol. Unit 1: A (1x)
Keywords
:
Protein-Drug Complex, Beta-Sheet Protein, Calcium Binding Protein, Metal Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Joung, S. K. Mohan, C. Yu
Molecular Level Interaction Of Inositol Hexaphosphate With The C2B Domain Of Human Synaptotagmin I
Biochemistry 2012
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: INOSITOL HEXAKISPHOSPHATE (IHPa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
IHP
1
Ligand/Ion
INOSITOL HEXAKISPHOSPHATE
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
TYR A:311 , THR A:329 , ILE A:330 , LYS A:332 , TYR A:364 , ILE A:367 , GLY A:368
BINDING SITE FOR RESIDUE IHP A 1
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
1: VAR_072911 (I367T, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_072911
I
368
T
SYT1_HUMAN
Disease
---
A
I
367
T
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: C2 (-|A:286-377)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
C2
PS50004
C2 domain profile.
SYT1_HUMAN
157-245
287-378
1
-
A:286-377
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Exons
(3, 3)
Info
All Exons
Exon 1.12 (A:271-309)
Exon 1.13 (A:309-353)
Exon 1.14a (A:354-421)
View:
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All Exon Boundaries
1: Boundary 1.11/1.12
2: Boundary 1.12/1.13
3: Boundary 1.13/1.14a
4: Boundary 1.14a/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENST00000393240
1
ENSE00001514587
chr12:
79257773-79258115
343
SYT1_HUMAN
-
0
0
-
-
1.2b
ENST00000393240
2b
ENSE00001514586
chr12:
79258778-79258889
112
SYT1_HUMAN
-
0
0
-
-
1.3
ENST00000393240
3
ENSE00001411176
chr12:
79371579-79371711
133
SYT1_HUMAN
-
0
0
-
-
1.6
ENST00000393240
6
ENSE00001399568
chr12:
79441077-79441142
66
SYT1_HUMAN
-
0
0
-
-
1.7
ENST00000393240
7
ENSE00001164727
chr12:
79611283-79611465
183
SYT1_HUMAN
1-56
56
0
-
-
1.8
ENST00000393240
8
ENSE00001098488
chr12:
79679567-79679751
185
SYT1_HUMAN
56-117
62
0
-
-
1.9
ENST00000393240
9
ENSE00001272133
chr12:
79685788-79685910
123
SYT1_HUMAN
118-158
41
0
-
-
1.10b
ENST00000393240
10b
ENSE00001272119
chr12:
79689849-79690016
168
SYT1_HUMAN
159-214
56
0
-
-
1.11
ENST00000393240
11
ENSE00000910597
chr12:
79693164-79693331
168
SYT1_HUMAN
215-270
56
0
-
-
1.12
ENST00000393240
12
ENSE00001620152
chr12:
79747282-79747399
118
SYT1_HUMAN
271-310
40
1
A:271-309
39
1.13
ENST00000393240
13
ENSE00001657879
chr12:
79837853-79837986
134
SYT1_HUMAN
310-354
45
1
A:309-353
45
1.14a
ENST00000393240
14a
ENSE00001824637
chr12:
79842698-79844059
1362
SYT1_HUMAN
355-422
68
1
A:354-421
68
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2lhaa_ (A:)
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)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
C2 domain-like
(198)
Superfamily
:
C2 domain (Calcium/lipid-binding domain, CaLB)
(148)
Family
:
Synaptotagmin-like (S variant)
(38)
Protein domain
:
Synaptogamin I
(17)
Human (Homo sapiens) [TaxId: 9606]
(10)
1a
d2lhaa_
A:
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CATH Domains
(0, 0)
Info
all CATH domains
View:
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Sorry, no Info available
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Atom Selection
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Protein
Nucleic
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Protein & NOT Variant
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Chain A
Asymmetric Unit 1
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Asym.Unit (467 KB)
Header - Asym.Unit
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Header - Biol.Unit 1
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