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2KJE
Asym. Unit
Info
Asym.Unit (703 KB)
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Models
(20 )
Title
:
NMR STRUCTURE OF CBP TAZ2 AND ADENOVIRAL E1A COMPLEX
Authors
:
J. C. Ferreon, M. Martinez-Yamout, H. Dyson, P. E. Wright
Date
:
27 May 09 (Deposition) - 15 Sep 09 (Release) - 15 Sep 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A,B (20 x)
Keywords
:
Cbp, Taz2, E1A, Adenoviral, Acetylation, Activator, Bromodomain, Chromosomal Rearrangement, Disease Mutation, Host-Virus Interaction, Isopeptide Bond, Metal-Binding, Methylation, Nucleus, Phosphoprotein, Transcription, Transcription Regulation, Transferase, Ubl Conjugation, Zinc, Zinc-Finger, Alternative Splicing, Dna-Binding, Early Protein, Oncogene
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. C. Ferreon, M. A. Martinez-Yamout, H. J. Dyson, P. E. Wright
Structural Basis For Subversion Of Cellular Control Mechanisms By The Adenoviral E1A Oncoprotein.
Proc. Natl. Acad. Sci. Usa V. 106 13260 2009
(for further references see the
PDB file header
)
[
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Hetero Components
(1, 3)
Info
All Hetero Components
1a: ZINC ION (ZNa)
1b: ZINC ION (ZNb)
1c: ZINC ION (ZNc)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ZN
3
Ligand/Ion
ZINC ION
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Sites
(3, 3)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:1782 , CYS A:1786 , CYS A:1791 , CYS A:1796
BINDING SITE FOR RESIDUE ZN A 500
2
AC2
SOFTWARE
HIS A:1805 , CYS A:1809 , CYS A:1817 , CYS A:1820
BINDING SITE FOR RESIDUE ZN A 501
3
AC3
SOFTWARE
HIS A:1830 , CYS A:1834 , CYS A:1839 , CYS A:1844
BINDING SITE FOR RESIDUE ZN A 502
[
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SAPs(SNPs)/Variants
(4, 4)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
1: VAR_078559 (R1787P, chain A, )
2: VAR_078560 (C1820F, chain A, )
3: VAR_078561 (C1827W, chain A, )
4: VAR_078562 (C1839Y, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_078559
R
1786
P
CBP_HUMAN
Disease
---
A
R
1787
P
2
UniProt
VAR_078560
C
1819
F
CBP_HUMAN
Disease
---
A
C
1820
F
3
UniProt
VAR_078561
C
1826
W
CBP_HUMAN
Disease
---
A
C
1827
W
4
UniProt
VAR_078562
C
1838
Y
CBP_HUMAN
Disease
---
A
C
1839
Y
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
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]
PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: ZF_TAZ (-|A:1766-1847)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ZF_TAZ
PS50134
Zinc finger TAZ-type profile.
CBP_HUMAN
347-433
1765-1846
1
-
A:1766-1847
[
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Exons
(1, 1)
Info
All Exons
Exon 1.31 (A:1764-1855)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.30/1.31
2: Boundary 1.31/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000262367
1a
ENSE00001871332
chr16:
3930722-3929833
890
CBP_HUMAN
1-29
29
0
-
-
1.2
ENST00000262367
2
ENSE00001789080
chr16:
3901010-3900298
713
CBP_HUMAN
29-266
238
0
-
-
1.3
ENST00000262367
3
ENSE00001788865
chr16:
3860780-3860604
177
CBP_HUMAN
267-325
59
0
-
-
1.4
ENST00000262367
4
ENSE00001744566
chr16:
3843627-3843387
241
CBP_HUMAN
326-406
81
0
-
-
1.5
ENST00000262367
5
ENSE00001693899
chr16:
3842095-3841982
114
CBP_HUMAN
406-444
39
0
-
-
1.6
ENST00000262367
6
ENSE00001692816
chr16:
3832927-3832685
243
CBP_HUMAN
444-525
82
0
-
-
1.7
ENST00000262367
7
ENSE00001608958
chr16:
3831307-3831205
103
CBP_HUMAN
525-559
35
0
-
-
1.8
ENST00000262367
8
ENSE00001732416
chr16:
3830879-3830733
147
CBP_HUMAN
559-608
50
0
-
-
1.9
ENST00000262367
9
ENSE00001656158
chr16:
3828818-3828701
118
CBP_HUMAN
608-647
40
0
-
-
1.10
ENST00000262367
10
ENSE00001678454
chr16:
3828183-3828012
172
CBP_HUMAN
648-705
58
0
-
-
1.11
ENST00000262367
11
ENSE00001615007
chr16:
3827658-3827614
45
CBP_HUMAN
705-720
16
0
-
-
1.12
ENST00000262367
12
ENSE00001733259
chr16:
3824694-3824570
125
CBP_HUMAN
720-761
42
0
-
-
1.13
ENST00000262367
13
ENSE00001638447
chr16:
3823931-3823752
180
CBP_HUMAN
762-821
60
0
-
-
1.14
ENST00000262367
14
ENSE00001594624
chr16:
3820987-3820571
417
CBP_HUMAN
822-960
139
0
-
-
1.15
ENST00000262367
15
ENSE00001625302
chr16:
3819354-3819175
180
CBP_HUMAN
961-1020
60
0
-
-
1.16
ENST00000262367
16
ENSE00001784635
chr16:
3817910-3817721
190
CBP_HUMAN
1021-1084
64
0
-
-
1.17
ENST00000262367
17
ENSE00001709420
chr16:
3808973-3808855
119
CBP_HUMAN
1084-1123
40
0
-
-
1.18
ENST00000262367
18
ENSE00001644140
chr16:
3808049-3807810
240
CBP_HUMAN
1124-1203
80
0
-
-
1.19
ENST00000262367
19
ENSE00001699420
chr16:
3807377-3807289
89
CBP_HUMAN
1204-1233
30
0
-
-
1.20
ENST00000262367
20
ENSE00001592013
chr16:
3801807-3801727
81
CBP_HUMAN
1233-1260
28
0
-
-
1.21
ENST00000262367
21
ENSE00001789918
chr16:
3799684-3799628
57
CBP_HUMAN
1260-1279
20
0
-
-
1.22
ENST00000262367
22
ENSE00001670717
chr16:
3795355-3795278
78
CBP_HUMAN
1279-1305
27
0
-
-
1.23
ENST00000262367
23
ENSE00001684253
chr16:
3794962-3794895
68
CBP_HUMAN
1305-1328
24
0
-
-
1.24
ENST00000262367
24
ENSE00001804031
chr16:
3790550-3790400
151
CBP_HUMAN
1328-1378
51
0
-
-
1.25
ENST00000262367
25
ENSE00001623920
chr16:
3789725-3789579
147
CBP_HUMAN
1378-1427
50
0
-
-
1.26
ENST00000262367
26
ENSE00001698951
chr16:
3788673-3788560
114
CBP_HUMAN
1427-1465
39
0
-
-
1.27
ENST00000262367
27
ENSE00000894975
chr16:
3786816-3786651
166
CBP_HUMAN
1465-1520
56
0
-
-
1.28
ENST00000262367
28
ENSE00000894970
chr16:
3786204-3786037
168
CBP_HUMAN
1521-1576
56
0
-
-
1.29
ENST00000262367
29
ENSE00001062588
chr16:
3781938-3781777
162
CBP_HUMAN
1577-1630
54
0
-
-
1.30
ENST00000262367
30
ENSE00000865712
chr16:
3781474-3781193
282
CBP_HUMAN
1631-1724
94
0
-
-
1.31
ENST00000262367
31
ENSE00001292463
chr16:
3779875-3775055
4821
CBP_HUMAN
1725-2442
718
1
A:1764-1855
92
[
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2kjea_ (A:)
View:
Select:
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Classes
(
)
(
)
Folds
(
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(
)
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(
)
(
)
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Small proteins
(3458)
Fold
:
TAZ domain
(11)
Superfamily
:
TAZ domain
(11)
Family
:
TAZ domain
(11)
Protein domain
:
CREB-binding transcriptional adaptor protein CBP (p300)
(9)
Human (Homo sapiens) [TaxId: 9606]
(3)
1a
d2kjea_
A:
[
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_2kjeA00 (A:1764-1855)
View:
Select:
Label:
Classes
(
)
(
)
Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Up-down Bundle
(3216)
Topology
:
CREB-binding Protein; Chain A
(10)
Homologous Superfamily
:
CREB-binding Protein; Chain A
(10)
Human (Homo sapiens)
(5)
1a
2kjeA00
A:1764-1855
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Pfam Domains
(2, 2)
Info
all PFAM domains
1a: PFAM_Adeno_E1A_2kjeB01 (B:55-91)
2a: PFAM_zf_TAZ_2kjeA01 (A:1771-1844)
View:
Select:
Label:
Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
no clan defined [family: Adeno_E1A]
(2)
Family
:
Adeno_E1A
(2)
Human adenovirus C serotype 5 (HAdV-5) (Human adenovirus 5)
(2)
1a
Adeno_E1A-2kjeB01
B:55-91
Clan
:
no clan defined [family: zf-TAZ]
(13)
Family
:
zf-TAZ
(13)
Homo sapiens (Human)
(8)
2a
zf-TAZ-2kjeA01
A:1771-1844
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