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2K2D
Asym. Unit
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Asym.Unit (182 KB)
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Models
(15 )
Title
:
SOLUTION NMR STRUCTURE OF C-TERMINAL DOMAIN OF HUMAN PIRH2. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) TARGET HT2C
Authors
:
A. Lemak, Y. Sheng, M. Karra, S. Srisailam, R. C. Laister, S. Duan, C. H. Arrowsmith, Northeast Structural Genomics Consortium (Nesg)
Date
:
31 Mar 08 (Deposition) - 15 Apr 08 (Release) - 28 Apr 09 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A (15 x)
Keywords
:
Zinc-Binding Protein, Cytoplasm, Metal-Binding, Nucleus, Zinc-Finger, Metal Binding Protein, Structural Genomics, Psi-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. Sheng, R. C. Laister, A. Lemak, B. Wu, E. Tai, S. Duan, J. Lukin, M. Sunnerhagen, S. Srisailam, M. Karra, S. Benchimol, C. H. Arrowsmith
Molecular Basis Of Pirh2-Mediated P53 Ubiquitylation.
Nat. Struct. Mol. Biol. V. 15 1334 2008
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
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All Hetero Components
1a: ZINC ION (ZNa)
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No.
Name
Count
Type
Full Name
1
ZN
1
Ligand/Ion
ZINC ION
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Sites
(1, 1)
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1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
CYS A:40 , ASP A:42 , CYS A:58 , ILE A:60
BINDING SITE FOR RESIDUE ZN A 80
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
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Exons
(2, 2)
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All Exons
Exon 1.6g (A:33-37)
Exon 1.7j (A:38-79)
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1: Boundary 1.6c/1.6g
2: Boundary 1.6g/1.7j
3: Boundary 1.7j/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1b
ENST00000324439
1b
ENSE00002044590
chr4:
76439895-76439407
489
ZN363_HUMAN
1-30
30
0
-
-
1.2b
ENST00000324439
2b
ENSE00001720950
chr4:
76434506-76434387
120
ZN363_HUMAN
31-70
40
0
-
-
1.3b
ENST00000324439
3b
ENSE00001615955
chr4:
76434145-76434030
116
ZN363_HUMAN
71-109
39
0
-
-
1.4b
ENST00000324439
4b
ENSE00001706744
chr4:
76419389-76419311
79
ZN363_HUMAN
109-135
27
0
-
-
1.5b
ENST00000324439
5b
ENSE00001285948
chr4:
76417143-76417099
45
ZN363_HUMAN
136-150
15
0
-
-
1.6a
ENST00000324439
6a
ENSE00001077848
chr4:
76416992-76416934
59
ZN363_HUMAN
151-170
20
0
-
-
1.6c
ENST00000324439
6c
ENSE00001077852
chr4:
76416847-76416821
27
ZN363_HUMAN
170-179
10
0
-
-
1.6g
ENST00000324439
6g
ENSE00001077845
chr4:
76415911-76415791
121
ZN363_HUMAN
179-219
41
1
A:33-37
5
1.7j
ENST00000324439
7j
ENSE00001946767
chr4:
76407876-76404247
3630
ZN363_HUMAN
220-261
42
1
A:38-79
42
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SCOP Domains
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CATH Domains
(1, 1)
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all CATH domains
1a: CATH_2k2dA00 (A:33-79)
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Organisms
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Class
:
Mainly Beta
(13760)
Architecture
:
Single Sheet
(341)
Topology
:
Rubrerythrin, domain 2
(145)
Homologous Superfamily
:
[code=2.20.28.10, no name defined]
(77)
Human (Homo sapiens)
(1)
1a
2k2dA00
A:33-79
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Pfam Domains
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Chain A
Asymmetric Unit 1
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