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2GWH
Asym. Unit
Info
Asym.Unit (110 KB)
Biol.Unit 1 (104 KB)
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(1)
Title
:
HUMAN SULFOTRANFERASE SULT1C2 IN COMPLEX WITH PAP AND PENTACHLOROPHENOL
Authors
:
W. Tempel, P. W. Pan, L. Dombrovski, A. Allali-Hassani, M. Vedadi, P. Lo J. Weigelt, M. Sundstrom, C. H. Arrowsmith, A. M. Edwards, A. Bochkare A. N. Plotnikov, Structural Genomics Consortium (Sgc)
Date
:
04 May 06 (Deposition) - 16 May 06 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Sulfotransferase, Sulfate Conjugation, Pentachlorophenol, Pap, Pesticide, Structural Genomics, Structural Genomics Consortium, Sgc, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Allali-Hassani, P. W. Pan, L. Dombrovski, R. Najmanovich, W. Tempel, A. Dong, P. Loppnau, F. Martin, J. Thornton, J. Thonton, A. M. Edwards, A. Bochkarev, A. N. Plotnikov, M. Vedadi, C. H. Arrowsmith
Structural And Chemical Profiling Of The Human Cytosolic Sulfotransferases.
Plos Biol. V. 5 E97 2007
[
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Hetero Components
(3, 11)
Info
All Hetero Components
1a: ADENOSINE-3'-5'-DIPHOSPHATE (A3Pa)
1b: ADENOSINE-3'-5'-DIPHOSPHATE (A3Pb)
2a: PENTACHLOROPHENOL (PCIa)
2b: PENTACHLOROPHENOL (PCIb)
2c: PENTACHLOROPHENOL (PCIc)
3a: UNKNOWN ATOM OR ION (UNXa)
3b: UNKNOWN ATOM OR ION (UNXb)
3c: UNKNOWN ATOM OR ION (UNXc)
3d: UNKNOWN ATOM OR ION (UNXd)
3e: UNKNOWN ATOM OR ION (UNXe)
3f: UNKNOWN ATOM OR ION (UNXf)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
A3P
2
Ligand/Ion
ADENOSINE-3'-5'-DIPHOSPHATE
2
PCI
3
Ligand/Ion
PENTACHLOROPHENOL
3
UNX
6
Ligand/Ion
UNKNOWN ATOM OR ION
[
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Sites
(11, 11)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
LYS A:55 , ALA A:56 , GLY A:57 , THR A:58 , THR A:59 , TRP A:60 , ARG A:137 , SER A:145 , TYR A:200 , THR A:234 , SER A:235 , PHE A:236 , MET A:239 , PHE A:262 , MET A:263 , ARG A:264 , LYS A:265 , GLY A:266 , HOH A:1016 , HOH A:1033 , HOH A:1076 , HOH A:1119 , HOH A:1120 , HOH A:1124
BINDING SITE FOR RESIDUE A3P A 401
02
AC2
SOFTWARE
ILE A:93 , LYS A:113 , HIS A:115 , PHE A:149 , ASN A:153 , LEU A:156 , TRP A:176 , TYR A:247 , MET A:255 , HOH A:1120
BINDING SITE FOR RESIDUE PCI A 402
03
AC3
SOFTWARE
LYS B:55 , ALA B:56 , GLY B:57 , THR B:58 , THR B:59 , TRP B:60 , ARG B:137 , SER B:145 , TYR B:200 , THR B:234 , SER B:235 , PHE B:236 , MET B:239 , PHE B:262 , MET B:263 , ARG B:264 , LYS B:265 , GLY B:266 , HOH B:1015 , HOH B:1022 , HOH B:1038 , HOH B:1072 , HOH B:1131
BINDING SITE FOR RESIDUE A3P B 401
04
AC4
SOFTWARE
PHE B:88 , ILE B:93 , LYS B:113 , HIS B:115 , ASN B:153 , TRP B:176 , TYR B:247 , MET B:255 , HOH B:1038
BINDING SITE FOR RESIDUE PCI B 402
05
AC5
SOFTWARE
LYS B:225 , ASP B:228 , LYS B:229 , HIS B:232 , TYR B:233
BINDING SITE FOR RESIDUE PCI B 501
06
AC6
SOFTWARE
ARG B:194
BINDING SITE FOR RESIDUE UNX B 1001
07
AC7
SOFTWARE
GLN B:301 , PHE B:302
BINDING SITE FOR RESIDUE UNX B 1002
08
AC8
SOFTWARE
ASP A:284 , LYS A:288
BINDING SITE FOR RESIDUE UNX A 1003
09
AC9
SOFTWARE
TRP A:187 , THR A:294
BINDING SITE FOR RESIDUE UNX A 1004
10
BC1
SOFTWARE
GLU B:285 , LYS B:288 , HOH B:1133
BINDING SITE FOR RESIDUE UNX B 1005
11
BC2
SOFTWARE
LYS A:131 , ARG A:194
BINDING SITE FOR RESIDUE UNX A 1006
[
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SAPs(SNPs)/Variants
(1, 2)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_061889 (I68M, chain A/B, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_061889
I
68
M
ST1C4_HUMAN
Polymorphism
41322445
A/B
I
68
M
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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End label:
Sorry, no Info available
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Exons
(7, 14)
Info
All Exons
Exon 1.1b (A:16-57 | B:15-57)
Exon 1.2a (A:57-99 | B:57-99)
Exon 1.2c (A:99-131 | B:99-131)
Exon 1.3 (A:132-174 | B:132-174)
Exon 1.4 (A:174-205 | B:174-205)
Exon 1.5 (A:206-266 | B:206-266)
Exon 1.6c (A:266-302 (gaps) | B:266-302)
View:
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All Exon Boundaries
1: Boundary -/1.1b
2: Boundary 1.1b/1.2a
3: Boundary 1.2a/1.2c
4: Boundary 1.2c/1.3
5: Boundary 1.3/1.4
6: Boundary 1.4/1.5
7: Boundary 1.5/1.6c
8: Boundary 1.6c/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1b
ENST00000272452
1b
ENSE00001939798
chr2:
108994468-108994962
495
ST1C4_HUMAN
1-57
57
2
A:16-57
B:15-57
42
43
1.2a
ENST00000272452
2a
ENSE00000963464
chr2:
108998218-108998343
126
ST1C4_HUMAN
57-99
43
2
A:57-99
B:57-99
43
43
1.2c
ENST00000272452
2c
ENSE00000963465
chr2:
108998841-108998938
98
ST1C4_HUMAN
99-131
33
2
A:99-131
B:99-131
33
33
1.3
ENST00000272452
3
ENSE00000963466
chr2:
108999549-108999675
127
ST1C4_HUMAN
132-174
43
2
A:132-174
B:132-174
43
43
1.4
ENST00000272452
4
ENSE00001378859
chr2:
108999872-108999966
95
ST1C4_HUMAN
174-205
32
2
A:174-205
B:174-205
32
32
1.5
ENST00000272452
5
ENSE00000963468
chr2:
109002648-109002828
181
ST1C4_HUMAN
206-266
61
2
A:206-266
B:206-266
61
61
1.6c
ENST00000272452
6c
ENSE00001318272
chr2:
109003776-109004513
738
ST1C4_HUMAN
266-302
37
2
A:266-302 (gaps)
B:266-302
37
37
[
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2gwha_ (A:)
1b: SCOP_d2gwhb_ (B:)
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Classes
(
)
(
)
Folds
(
)
(
)
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)
(
)
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(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
PAPS sulfotransferase
(54)
Protein domain
:
automated matches
(23)
Human (Homo sapiens) [TaxId: 9606]
(11)
1a
d2gwha_
A:
1b
d2gwhb_
B:
[
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_2gwhA00 (A:16-302)
1b: CATH_2gwhB00 (B:15-302)
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Homologous Superfamilies
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)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
P-loop containing nucleotide triphosphate hydrolases
(1378)
Human (Homo sapiens)
(413)
1a
2gwhA00
A:16-302
1b
2gwhB00
B:15-302
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
View:
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Sorry, no Info available
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Asymmetric Unit 1
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